Array 1 33887-31656 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMJ01000033.1 Bacteroides salyersiae strain BIOML-A9 scaffold33_size57167, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 33886 35 100.0 34 ................................... AGAGCCCAAATCACACCGATACCGGCACAAATGA 33817 35 100.0 34 ................................... TTATTATGCTTTTGTCCGTCTTTACCGTACAGAG 33748 35 100.0 35 ................................... TAATAGTTTATGTTTGGCAGGGTGACCCCAATCAT 33678 35 100.0 37 ................................... GCATATCCGGGGTCGGAGGAACCAGTTTGTCTACATT 33606 35 100.0 36 ................................... ATTGGGGTGTAGAAAATATCATCCTCTGTGGTGATT 33535 35 100.0 40 ................................... TCCAACGTATCCTCCGATTACCTCAACAGCGAAGTTGCGA 33460 35 100.0 40 ................................... CTTCCCGTTGCTTTTTGGTCAGCCGGTTGAGAATTTTTTT 33385 35 100.0 37 ................................... AAACTATTCCTTTGGGAAGGTTTGGCTTATGCGTAAT 33313 35 100.0 39 ................................... GGTATTTTCTTGCGCATTGATATTTGTTGTTGCAGCAAT 33239 35 100.0 36 ................................... GAGATTTCCAATATCTTACGGGTCGCTTCCTTACCG 33168 35 100.0 34 ................................... AAACAGTATCATTCATAACTTTGGCGTTTATATA 33099 35 100.0 32 ................................... ATTGAAATACGTCAATATAACGGCCGTTGTTT 33032 35 100.0 36 ................................... AAATCCAGACTTTGTGTGCCATTGTCTTCTTGGTTT 32961 35 100.0 36 ................................... AGGAGGAAATATGCATCTCCCTTTGCCTTACTGGTG 32890 35 100.0 33 ................................... GAACTCAGATTTGTAAACGCCCATACGAGCTTT 32822 35 100.0 35 ................................... ATTATCTCATCAGAAAGTCCCTGTAACTCCCATTC 32752 35 100.0 38 ................................... TAAAAGCATTTCCAAACCGTTTTCCGTCTCAATGATTT 32679 35 100.0 39 ................................... TTTAAGGAGACTGAAAGTTTCAAGCTTCAGCCGCAAAGA 32605 35 100.0 34 ................................... TTCTGGGCTTTCAGAATATTGGTGTAACAAGTTG 32536 35 100.0 38 ................................... TTTTGGAACGCTTATAGGGTTCCATTTTTACGTGTTTC 32463 35 100.0 41 ................................... CTTTTTACATTTGCGACTGTTAATTTTGCTTTCATAATCTT 32387 35 100.0 34 ................................... AGAACCGGAGCAAGAAGTCAGAACACTTAAGGCT 32318 35 100.0 37 ................................... TTCCTTCGGAGCAAGGGAACAATTCTTTAACCAATAT 32246 35 100.0 39 ................................... GGCAAATATAGCAAGTTTGGCATTGTCTTTCATGATACC 32172 35 100.0 37 ................................... ATGCTATACCCTGATTCCGATATCCGTTTAAACAACA 32100 35 100.0 35 ................................... GTCGCAGGAAGTACACATTGCACCAAAAACTACTG 32030 35 100.0 37 ................................... GGCGGCGCAGCTGCTATTCCAACCATCTTGTGTACAT 31958 35 100.0 37 ................................... ATCTTTGGGAGTAGGGAGGATTAAGAACATTTTGTCT 31886 35 100.0 37 ................................... ACATTTTTGGATCATTCGGTTCAAGATGCACCGGTTT 31814 35 94.3 35 ...................A............A.. AACTCGATACCAAGAGATGAACTCAAAGCGTCAAA 31744 35 71.4 20 .A....A.....C...T..A..C..AA.C...A.. TGTGTATGTATACTTGTGTG Deletion [31690] 31689 34 80.0 0 ......C.AT..-...TC.A............... | ========== ====== ====== ====== =================================== ========================================= ================== 32 35 98.3 36 ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Left flank : TATGTGGCCAAGTGGTGAGATGAAGTGAACAAAACATGAAAAAAGGCCAAACTCTTGCGAAAAACGATAAAAAGATAATTATCTGATTTATTTGATATTATATTTTTTAGATAAATTGTATTACTTAAATCACATTCGCAACAAAATACATGTTAGCAACAAAGTAAATCATTTGCGAAAATGATTCATTACTATACAAGCGATCTTTGACGTATTGCATTTATAATCAATAATATATTGTATAATACCTCTATACCGTTTTTCGAAAATGAATCTTTTTAAAGAAATTCAAAATCATTTTCGAAAATAGATATTCAATGTAAATATCTTATTTTTAAGCAAATAAGCATATATTAGCCAAACAAATTATTGATTTTCTTAAAAATAATACATACATTTGCGAAAAAGTTATTGGAATATAGCGTATTGTATTAAATAACAATACTTTATGAGAAATATACAAAACAAAGAGTAAAAAATAAATTATTGATAATCAGATT # Right flank : AAGCAACTCTCTAAAATCATTTATATCTCATTATCCCGAATTCAGAAACAATGATACATCATACACCTTTAATTCACTCTAATAATATTACCCCATTTTAACCTCAAAATTTTTCTTTTCCAATACCACATATCCCGCATTTTCATTATATTTACCTCCAAATACGCAACACCAAATGGCAAGAGCAAAAAAGACATTCTGTGTCGTAGCATACGATATTAAAGAAGACCGGAAAAGAGCACGCGTCTCTAAAATTCTGGAAAAATATGGAATAAGAGTCAATTTCAGTGTATTCGAATGTATGTTTACCGATATCCAACTATTACAAGTGCAAGAGAAAATAAAAAAAATATTGGATAAACGCTCCGATACAGTCATATACTATCCGATTTGCGTCAATTGTTATACAAAAATCATATATCAACCGGCACATCGCCAAACGTCCCGCACTATAGAAATTGTATAAAATAAAAAGAAATCATCTGATGAAACCCAAACGA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //