Array 1 309871-310779 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_HG422565.1 Candidatus Microthrix parvicella RN1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
    309871	    36	 100.0	    36	....................................	GAGCCAGCCCCACACCTGGCACGAGCCGTCCGTCAT  	
    309943	    36	  94.4	    36	A...........A.......................	CGCCGAGAGCCTGCCGGTTTCGGGCGGAACCCCGGC  	
    310015	    36	 100.0	    37	....................................	TGGGTTGGGGTGCTGGACGACTGGCCGGCGGACGGGT 	
    310088	    36	 100.0	    36	....................................	GGGGATCGCTACGTGGACCGTCGTTTACGGGAGACG  	
    310160	    36	 100.0	    38	....................................	GTCGTGTGGCGTGGCGGGACAGCGCCGCGAGGTGGAGG	
    310234	    36	 100.0	    38	....................................	ATGACTGTGGCGATGCCCATGCAGAGCTGGTAGACGAC	
    310308	    36	 100.0	    38	....................................	CCGCGCAGCGTCGGGGTCCTGGTGCCCTGCACGATGTC	
    310382	    36	 100.0	    37	....................................	TTGTGTGGTCCGTCGCCGGTGTGCCGGGCGGCCCGTC 	
    310455	    36	 100.0	    37	....................................	CGCCCGCCGTCATGGCGTCACCGCCCAGAGCCGCGGC 	
    310528	    35	  97.2	    37	...............-....................	TGCGCAGGCCATGACCATGAAGGACGGCGACGACGTT 	
    310600	    36	  97.2	    38	.........................T..........	GCCGACCTGCACCCCACCGCGCCGCCGTATGAGACGTG	
    310674	    36	 100.0	    36	....................................	CTGACACGGGAGCAGATGGTCGCCGAAGCACAGCAC  	
    310746	    34	  83.3	     0	....................--.C...G.C..T...	|                                     	
==========	======	======	======	====================================	======================================	==================
        13	    36	  97.9	    37	GCCGCAATGGAGCCCCGGCCTGATGGCCGGGGGAAG	                                      	       

# Left flank :   ATTGGCGGATGGGCCGCCGGTTGAAGTTGGGTCGATCGGGGTTGGTTCGCCCGGGATCTCCAAGTCGTACATGTGTTCGAGTATGACGGACAAGCAGGCCGTCGTCAACCTATTTCTGAAAGTACTTCGGAGCGCGTTCGTGCCGCTACTCACCGTGAAGAGAACGGCGCCGCGGTGCCACGGAACGGATTAGCGAGCAGCCTCCCGACGCTGCCCGGTAGTGCTGCGGGCGCCACCCATCCACCAGTGCGCGGCCACGACGGTGACGACCAGGAGCACTACCGCCCCCGCCTGGTGGGCGACGCCCAACGCGACGGGCACCGCGTGCACCAACGTGAGTGCGCCGGGTAGGAACTGCGCCACCACGGCCACCTTGAGCGCCAACGCGTGGGGCCGTGCCCCCGCCCGGTACAACCTGGCTGCCTCTACCAACGCGCCGACGACAACGACCACCGCCAACCAACGGTGCAGGAACTGCACCGCCACGGGGCTGTCCAGCG
# Right flank :  GCCCAGGCCATGAACACCGCCTCGGTCTTGCCGCATCCCGTTGGAATCTCCAGCGTCTCGGGCAGCCCAGATTCGACGAGGCGTCGCTGCCATCGGTAGGGGGGCAAGCCCGTGATGCGCTCGAACTCGGACGAGATGTCATTCATTGGGGCGTTCCTTCATTCCAAAAACCTCGCCAAGCACTCGCTTCGGGGCCGCAGGCGTCGGGCTGATCTTGCTGAGGGTCGCTTGGGAGATGGCAGAGGTCGCTCTGAGGTGGCAGCAACTTCGCGGTCACTGATCGGCTCAGCCGGGGTGGTGTGGATGGCGAGGTCATGGGGTTGGTCTCCTGGGTGAACCTCGACCGGCGGTCGAGGCGGAGCGACTCGACCCGCCGTCGTGAAGCTTCGTGAACATCATGACGCACCGCTGTGACAATGAGCGTTGGAACGCCCGACGTGACGGGATTGCGCGCGATGAACGCGATGAACGCGATGAACGGCGCCGAGGCGCCCGCCCGC

# Questionable array : NO	 Score: 3.16
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCCGCAATGGAGCCCCGGCCTGATGGCCGGGGGAAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-16.20,-16.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [2-18] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//