Array 1 1824260-1821397 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064000.1 Xanthomonas translucens pv. undulosa strain XtKm12 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 1824259 31 100.0 34 ............................... ATGTAGTGGGCGATGACCTTGGCGGACGTGTTGA 1824194 31 100.0 36 ............................... TTTTCCAACCCGAGCGGATCTGTAGGCCATATGCGC 1824127 31 100.0 34 ............................... AAGTACACCGGTGGCGTGGCAGGGGATTTCCGCC 1824062 31 100.0 35 ............................... TTGCGCTTTGCAGGCGGCACTTCTGCGCTGTGTCT 1823996 31 100.0 36 ............................... ATGCTGAAGTCCGGCGTGCCGTCCACACTGTGGCGC 1823929 31 100.0 36 ............................... TCCACAATCTGCCGCGCCGTCTTGATGTAGCAGCGC 1823862 31 100.0 35 ............................... ATGCAGCCGGCCCAGTGGCACGGGGTAAACCCCTC 1823796 31 100.0 34 ............................... TTGACCGAAATCGCCGGCCAGAAACGCGGCTTGC 1823731 31 100.0 35 ............................... ACGCGCAACGATGGCGTGCGCGTTGGCTGCACATA 1823665 31 100.0 34 ............................... ACTTGAATGGCAAGAAAAATACGATCCGCACAGA 1823600 31 100.0 34 ............................... ACTGGGGACCTGACGTTGTGGATGGCGTAGCCGG 1823535 31 100.0 34 ............................... TGGTGGAGTTATACCCCAAAGTTCCGGAGTTTAT 1823470 31 100.0 37 ............................... CACGATGATTTGACGATCGGGGTACAGCGCGCGGACG 1823402 31 100.0 34 ............................... TCGATCGCACTGGTGGCGCTGGCGATGTTCGCCT 1823337 31 100.0 35 ............................... ATAAAAGGGTCTGACTCGACAAGCGCCGTATAATC 1823271 31 100.0 35 ............................... ATAAAAGGGTCTGACTCGACAAGCGCCGTATAATC 1823205 31 100.0 35 ............................... ACGCACAGTCCAGCCGCCAACATCCGACGGCACAA 1823139 31 100.0 33 ............................... GCGCAAACGGCAAGCCGGTGACGTTGTGGAGCG 1823075 31 100.0 33 ............................... TGCGGCCCTGCATGCGCTGAAGCACACCACCGT 1823011 31 100.0 35 ............................... GCGGATGAGGATTCTGCCGCACCAGAGGATTCCGC 1822945 31 100.0 34 ............................... TGCAGCGCAACATAGTCGGCCCGCTGCTGGATGA 1822880 31 100.0 38 ............................... CCTGGCTACGAGGTTTCTGACACAGGCGGAGTGCGCAG 1822811 31 100.0 34 ............................... CGGCGTCGTCAGTGTCGTGCTCCCATCTCGCATC 1822746 31 100.0 35 ............................... AACTCATGCTCAAGTAAACGGTAAAATTGCGCGTC 1822680 31 100.0 34 ............................... ATCTAGCCAGCACGCCCACCTATCCATGGCCTCC 1822615 31 100.0 37 ............................... AATACTGCGCTCATCGACGACTCCCGGCGGCAAGTGA 1822547 31 100.0 35 ............................... CTGATCGACGTGGATACCGCGGCCGGCGTCTACCG 1822481 31 100.0 33 ............................... ACAACGCAATCCCGTTCACCCTGACGCTGCAAG 1822417 31 100.0 36 ............................... CATGAAGATGCTGCCAGAGACGGGGTGATTGGCTCG 1822350 31 100.0 36 ............................... TGGCAGTCGCGCCACAACCTGCGGCACGCGCCGCAG 1822283 31 100.0 36 ............................... GCGCAAATCGCTGCAGTACGTCGGGCCCTCGCGCCA 1822216 31 100.0 35 ............................... TGGTCGCGGCGTGGGGGGTCACTGGTGTCGTCGCG 1822150 31 100.0 36 ............................... TGGCTGGGGATGCGGTAATGCGCGGCCTGCGTTGCG 1822083 31 100.0 34 ............................... TCCAAGTCGGGATGGTCCGCGGCGCCGGCGCGGC 1822018 31 100.0 34 ............................... AATGGCCGCCAAGCCGAAGTAGGTACCATCTGTC 1821953 31 100.0 35 ............................... CAGTCCGCCATTTCGGCCACAAGCTGCGGTGCGGC 1821887 31 100.0 33 ............................... AGCGCCGGGAAAGTGGTTTTGACGACTGGGGAT 1821823 31 100.0 36 ............................... ACGGAGGCGCTGCTAGCAAGCATGCGCATGCCGCTG 1821756 31 100.0 35 ............................... AGAAATATGTCGGAAGTGTCCATTGACGCGGTTGC 1821690 31 100.0 34 ............................... TCAGCCTGCGTTGCTTCCCGCAAGTTAGAGACCC 1821625 31 100.0 35 ............................... TTTGGCGTCAGGTTGAGCACGAACTTGTCTGGGTC 1821559 31 100.0 34 ............................... TGGTGCGACTCTATCAGCTGCCCCACTCATCAGG 1821494 31 100.0 35 ............................... ACCCATGCCATGTCGTCCCGGCGCCACTCGACATC 1821428 31 87.1 0 ......CG.......C.........C..... | G [1821401] ========== ====== ====== ====== =============================== ====================================== ================== 44 31 99.7 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGATCAGCTACGATGTCAGCACGAGTTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAGGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTACAAGAAAAACACTAACCTCTTCCGCTCACTACAGGTCCGCGGCGGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : TGGCCTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAATGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACGGTCCCGGCCGGCTGACCGTTCACGGTGACCTCGGCCTTGTACTTGCCCGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGCTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACATTGGTGGTGGTGGAGGAACCCTCGGTTTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //