Array 1 9487-9977 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXIF01000032.1 Malaciobacter halophilus strain DSM 18005 NODE_37_length_71605_cov_86.600388, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 9487 30 100.0 36 .............................. AAGCGACCTTTTAGGGATGCCTTCAATAAAGTTTTA 9553 30 100.0 36 .............................. CACTTTACTAGCTGTTCCATCAAAAGTTCTGTTTTA 9619 30 100.0 35 .............................. AGTTATAATACTTTTAATAAGTTATTCTTTGTTTT 9684 30 93.3 36 A.T........................... AATGTAACAAAAGTAACTGATAGATTATATGTTTTA 9750 30 100.0 36 .............................. TAATTATGAACATTCAAGAGAATCAACTTTGTTTTA 9816 30 100.0 36 .............................. TAATTATGAACATTCAAGAGAATCAACTTTGTTTTA 9882 30 100.0 36 .............................. AACTCAACCATCTAAAACAGAAATATATCAGTTTTA 9948 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 99.2 36 TTCCCCCTACAAACGAGGGTATAGTCCAAC # Left flank : ATTATTAAACATATCTTCTTGACGGATAATATGATTATTTTCAATATCATTTTCACTTTGAACAATTAACTTTAACAAATTTAATGAATTTTGCATATTTTCGTAGCTCTTAATATCTTGAATAACTGCTTTTGCCTCACCATTTTGTGTGATAATAACTGATCGTTGATTTTCATTTACATTGTTTATTACATCAGCTGTCTTCGATTTTAAATAGCTAATTGGTTTTATATCTTGACTTAAATGCATAGGTGCAACCTTTTTAAGATATCGTTTTAACACAGTACTATATTTGAATTTAATTTAGTATTAAATGTTTTTTGTTAATAATTATTTTAATATATTTTATAATACTATTATAAATTTTTTACTATTCTGTTATTAAGTTATCGTTATCGCCTGACCCTACTCTCCAATTATATCTCCAATTATAAAATCATTTCTATTCTACTATTAAGTTATCGTTATCACCTGACCCTACTTTTCTACTTTTCTACTTT # Right flank : CCGATATTTTACAAAAGGCTAACCAAAGAGCTTCTTAAATGTTTTACCGCATAAAAAACAGGAAAATATCTATTATATTGAGTATTTTTAGTCCATTTTTTACTTATTATAACCCTTTTTTATTTGTTCTTCTTTTGCTATTGCATTTTTTATTTTTTCCTCATCTTTTGTTTCCCCTATAGCTTCGATAACTTTTTGTTTTAAAAGCTCTATCACTTTGAGTTTATAAATAAGATAATAATCATTTGGAACTAAGCTCTCTTTTTTGTGTATGTCAGCTATTTTACTTTCTTTTTGACTATGTATATTTAAAGACTTTAGATATTGTACTGTTTTCATAGTAAAATCATTGATAGGATTGTAGTGAAGAATCTCTTGCATTTTATGCTCTTTTTGAAGATAGTTTACTATCTCTTCTCTTTGTGCAAATATCTCATTATTTTCAAAAGCTTTTAACATATTTTCAATATTTTGATGGGCAATATCATTTCTAGTTTGTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCCCCTACAAACGAGGGTATAGTCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 12936-10439 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXIF01000052.1 Malaciobacter halophilus strain DSM 18005 NODE_57_length_45194_cov_87.650864, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 12935 30 100.0 35 .............................. CAGAAAAAAAATCTTATTGCAGATATAGAAACATG 12870 30 100.0 35 .............................. CCTAAAAAGCTTTGCTTAGTATGATCTATATCAAA 12805 30 100.0 36 .............................. AACTTTTAAATATTTCATCTTCTGAAATTCTTCTTT 12739 30 100.0 34 .............................. CCTGACTAGGTGTATCTCAAAATTTGAGAACTTT 12675 30 100.0 36 .............................. GCAGTAATAGCTAGATCAGATCCTAAAGCAGAACTA 12609 30 100.0 35 .............................. TTATCTATTGATGGGATAGGGTAATTTTTAAAAAT 12544 30 100.0 34 .............................. TATCTATTACAGAATTCACTTAAATTTAATTCTA 12480 30 100.0 38 .............................. GTTTAATATTTCTTGTATAAAATCTGTTAATACAAAAT 12412 30 100.0 36 .............................. TTATCTCCAGTGATTTTAATAATTGCTGCTTTTTGA 12346 30 100.0 34 .............................. TCTTTAATTAAAGAGTAGGGTGATGGTGAGTTTG 12282 30 100.0 34 .............................. TTGCATTTAAAGACGCTTTACAAACAGACGCTTT 12218 30 100.0 34 .............................. TCAGTTGATATTGTAACTGTTTCCATTTTTTGCT 12154 30 100.0 35 .............................. TCAATAGTCAATAACTTTTTAAACAATAAATCGTC 12089 30 100.0 35 .............................. GTATAACCATTTGCACCATTTGCACATAGAACTTT 12024 30 100.0 37 .............................. TTTAAATAGAGAGCCTTTAATTTTTCTTTAAAATCTA 11957 30 100.0 35 .............................. CTTGCAAAAGAGATTGAAGAACTTGCACCAGTAGT 11892 30 100.0 35 .............................. CTTGTTATTTCATATTCTATCATTAATTATCCTAA 11827 30 100.0 35 .............................. ATGGTTTCAGCACATGACGAAAAGTATAAACAAAA 11762 30 100.0 35 .............................. TCTTTTTTAGGTATTCCTAAATATGTATGTTCGTA 11697 30 100.0 35 .............................. ATTATAGAAAGTGCATCTAAAGATGTAGATAAAAA 11632 30 100.0 37 .............................. ACTAACTGATTAACTCCTCTTTGTGTTTGAGGGATTT 11565 30 100.0 34 .............................. AGAGAAGTTATCTTTGAATTAAGACCACTAATAT 11501 30 100.0 34 .............................. AATTGAGCTTAACCATAGGCTCAAATTGAGCCTA 11437 30 100.0 34 .............................. CTTATGATAACAACTGCGAAGCCAATCATCGCAC 11373 30 100.0 35 .............................. CCCTTATATTTTCCAAACTCAACTTCACTATTACC 11308 30 100.0 36 .............................. TAATATTCCTTTATAAATTATTTGCTTTTTTTGAAG 11242 30 100.0 34 .............................. GTATGAAGAAAATATTAGAAGATTAGTATTTACG 11178 30 100.0 34 .............................. TTTAACATAGCAGCTGGTACACCAAAAATAGTTG 11114 30 100.0 34 .............................. ACGAATGGAGTACACATTTGCGATTAAGCATATA 11050 30 100.0 36 .............................. AAAGCAAAGTAGTTACATTTATATCTTAAATCATTC 10984 30 100.0 35 .............................. GATGTTGAAGCAAAACATTATAATGATGTTTTAAG 10919 30 100.0 34 .............................. TAGGGTCTAAATTATATTCATCAATAAACTTTTG 10855 30 100.0 34 .............................. ACTTGTTTGAGGGTTGGAAGTGTTTATTTAGAAT 10791 30 100.0 36 .............................. GTTGTTTATGGTGCTAAAAGGATAGCTGATTTTATT 10725 29 96.7 34 ........-..................... TCAATAAATTCTACATCAATTTGATAATCACTTG 10662 30 100.0 35 .............................. TTCAGATGAAATGAAAAATCACTACAAATCAAAAG 10597 30 100.0 36 .............................. AAGCTTTTTTGCATTACTGCACACCTCAAACACAAT 10531 30 100.0 34 .............................. TTGGATAGAATCAGCAAGAACTGTATTTGTTTTC 10467 29 86.7 0 T..A....................A-.... | ========== ====== ====== ====== ============================== ====================================== ================== 39 30 99.6 35 CTTGAACCAAAACATATAATGTATTGAAAT # Left flank : AAAATATAAGGGCTATTTATGGCAAGTAAGAAACAAAATTTTAATTATAATTATATCTTTTTATTTTATGATATTGCAGATGAATTTAGTGAATCGGGAAAGTATAGAGTTGCAAAGGTTTTTAAAATTTGTAAACAATACTTAAAACATCATCAAAAATCTATTTTTAGAGGAAGTATTACTCCTTCGAATCAAATAATGCTTGAAAATAAACTGAAAAAAGTAATAGATAAAGACTTAGATTTTATTTCCATAATTAAAGTACAAAACTCAGGAAGTTTTGCAGAAGTTACACTTGGTACAAATAAAAAAGAATCTGAATCAATTTTTATATAATTTTCCAACCTATTTAAAAATAATATCATTTAAAAATAGCTATAATATCGAACTTTTCAAGAGTTCTTTGACAACTTATTGTTTTTATGATAATTGGTTGGAAAAACTTTAAAGAAAATCCTTTTTATGGGAAAGATGATTTTATAAAGAGCGATTTTATCTTC # Right flank : GAATCTAATAAAATTAGGATTCTTAAATATAAGATTTATAAGAATTGATTTCAATCCTTTTTTATTACTGATTAGATTTTAAAAGTAAGTTAATAAAAACTTATAATACCTTTACTTAAATAGATTAAAAAAACTTTTACTTATAATACGCAAAAATTATGTATTCAAGGTAAGTAATGATTAAAAAAATTGATATGAATTCAAACGAGTTTGAAACAGAATTTGAACTAACAAAACAGTTTACTGATAAAGTTTTAGATAGATTTGGTTTCGTATATAATCCAGAAAATGATGTAAATGAATCAGTTCAGCAAGGACTAACAAGAAATAAACTAATTTATGGAAAAAGATTTTGTCCATGTTTTATGGTAAAAGGTCAAACAAAAGAGGAACAAAAAAAAGCAGACAATAGATTATGTCCTTGTAAACCTGCATTAGAAGTTGAAATTCCAAGAGATGGAAAGTGTCACTGTGGTATTTTTTGTACTCCTGAATTTGCT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATAATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //