Array 1 1692544-1692876 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIPME010000002.1 Anaerococcus murdochii strain FDAARGOS_1460 ctg.s1.000000F_arrow_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1692544 28 100.0 33 ............................ TAGACTAGAGGAAGGTGTAGCACTCGACGAGGA 1692605 28 100.0 33 ............................ TAGACTAGAGGAAGGTGTAGCACTCGACGAGGA 1692666 28 100.0 33 ............................ TGGTCACAGTCCCGTTGCCATAATTACAGTGGA 1692727 28 100.0 33 ............................ CTATCTACTCCTACCCCTCGACTGAGGTTTTCT 1692788 28 96.4 33 .....................T...... TGTTTTTATAAGTGCAACTTTTGTTTTTATAAG 1692849 28 71.4 0 G............GA......T..TAGA | ========== ====== ====== ====== ============================ ================================= ================== 6 28 94.6 33 ATTTTACCCGCATAGGCGGGGGTGATCC # Left flank : ACTACAACGTCCGAATCACAGGAGCTGGCTTCACACCGCCAGATTGGACGGAAGTAAGGAATGCTATGAAGTGGTTTATGGCAGATTTTGAATCTAAAAAATCTGATCTAAATGCTATCGAGCTTGCTTCATACGTCCACGCTGAGTTTGTCAGAATCCACCCTTTTCAAGACGGAAATGGCAGAACTGCAAGATTGTTGCTAAACTTTATGCTTATGAAAGCAGGCTACCAGCCTGTAATCATAGAAGCTAAAGATCGACCAATTTACTATGAGAGCCTAAATGATTATGCAGCTGCAGGAAACTTAGAAAACTTTTATAGTTTTATCCTGAATAAAGAAAAATTTATCCTGGAAGATTTAAAATCAGAAATTTATAAAGTGAAAAATAGAGGGAAAAGCCGATAAAATAGAGGTATAAACACCTTAGGATAAAAATAAAATGCCTTAAAATGCAAAATACGAAGACTATAATTAGCTTGAAATCAATATTTGCTAAGT # Right flank : ATAATATTGGATTTTTTGTTGTCATTGTTTTGATTTACTTATAAGGAATAATAAAGGAGAAAAAATTGGCTAGTAATGAAAGTTTAAACTCTGCTGCAAGAGATAAAAATGATGAGTTTTACACTCAGCTAACTGATGTAGAAAACGAATTAAGATATTATCGAAAACACTTTAAAGGAAAAACTGTTTTTTGTAATTGTGACGATCCATTTGAGTCAAATTTTTTTAAATATTTTGTTCTTAATTTTAATCGCCTAGGACTTAAAAAACTTATAGCTACTTGCTATGCAACTTCTCCTATAGCAAATCAGCAACTAAGCCTATTTGAAGTTGTAGGGGGTGATGAGTCAAGCGAGGGAAGACCTTATAAAGCTGTTGTCACTAAAATTTACGATGCAACAGGTGATGGTGGTATCGATATGCTCGATGTTGCCGAACTTTTTAAAATGGGCGAAAACGAGCTGACAGAGCTTAAAGGTGACGGAGATTTTAGATCTGAG # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTACCCGCATAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATTTTACCCGCACGAGCGGGGGTGATCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1706856-1707065 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIPME010000002.1 Anaerococcus murdochii strain FDAARGOS_1460 ctg.s1.000000F_arrow_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1706856 28 100.0 33 ............................ CTCCCCTATGCTGATAATCATAAACTTGACCAG 1706917 28 100.0 33 ............................ TAATCATACTTAAATTTACTTGACAAGTCAAAA 1706978 28 100.0 33 ............................ TATTGATCTGACAAGCTCAATGCAAAAGCTTTA 1707039 27 89.3 0 .................-........GA | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 ATTTTACCCGCATAAGCGGGGGTGATCC # Left flank : GGTAAAAGTGTAAATCCAAGAAAAGTATGGAATGAAGCAGTACGACTAGGAGTTACTGGTACTAGTTATGGAAGCGATGGTAATGGATTAGCAAGAATGCTAGAGTCTTACTTGGGTAGTCAAGGATATACAGTTAGAAGGACTTTAGATTATAATGAAGCTAGAAGACATCTAAGCAATGGCGGAATGGCTTTAGGCAATGTAGGCGGCAGGGATTATTATTCTAATCCACCAAGGCGAATTGGAAGCTGGTTTAACTTTAATGCAGGACACTTTGTAGCTTATGCTGGGGCAGATAAGAATGGTAATATCTTTACTCTTGATCCTGGGTGGAGAGAGAGGACAGGATTGGTAGACAAAGGTATGGTTCAAAGTGCAACAAAGGCATATTTCTTGATAGAAAAAAAGAAATGAATGTAAATATATGTAAACAAAAATAAAAAGCTTTAAAACGCAAAATATTGATTTTGAATTTAGCTTGAAATCATAGTTTACTAAGT # Right flank : ATTATAGAAAACTAAAAGCCAGGATCTGGTACTCCTGGCTTTTGTGTGCCTAAATGTAGACTAATATCTTTTCTAATCAATATTAATTTACTTCAAAACCATTAAAATCAAAAAATGATAAAGTGTTTTAATATTTTTTATTTTAATTATTATAGTGATTTATTAATCTGCAATAACTTTCCTATTAACTTAAGATTATTGTTCTGAAGATCGATTACTTTATTATTGCCATCTATAAATAAAAAATTTCCTTCATCAAGCAATCTAGCTTTTATTAATTGAATTTTATCATCAATTTCATCAAGAAAAATGTAGTTTTTCTTATCCTCAAATTCATTAACTTTACAAATGTAAATTATATCATGCTCATCAAAACAATTAGGAAATTTAGCGGAATCTTTTATTTTGTATGCAGCGATATTTTTGTATGGTATTTCAGAAGGATTATCAAAAGGAACATAATATTCAGTATCTTTATTGTCTGTTACTAAAATATCGTC # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTACCCGCATAAGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATTTTACCCGCACGAGCGGGGGTGATCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //