Array 1 20685-22359 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDHM01000007.1 Lactobacillus acidophilus strain L-55, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 20685 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 20746 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 20807 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 20868 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 20929 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 20990 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 21051 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 21112 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 21173 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 21234 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 21295 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 21356 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 21417 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 21479 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 21540 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21601 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21662 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 21723 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 21784 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 21845 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 21906 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21967 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 22028 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 22089 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 22150 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 22211 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 22272 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 22333 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 28 27 98.8 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //