Array 1 41703-41386 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLLI01000001.1 Lactococcus hodotermopsidis strain Hs30E4-3 sequence001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 41702 36 100.0 36 .................................... TTTTAGTAGTAGCGAATATGAGTTACATTCACTAAA 41630 36 100.0 33 .................................... TCAAATACTACGGCTTTATTGGATGATAAGTCT 41561 36 100.0 32 .................................... GTCATAAAGTGATACAATGTTTTGAGCGCTTC 41493 36 97.2 36 ...................C................ TTGTTGAACTTGCGGTCTGAAAAGTTATCAGGGCTT 41421 36 94.4 0 ................................T..A | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 98.3 34 AAATAGCCCCATTCCTCGTTAAAAGGGGACGAGAAC # Left flank : GTTGTCATTTTAGCTAAAAGTGAATATGATGAACTACAAAAAGAGCTTGCAAGATTGCAAGCTAAAGTTAAGTTGTTTTCTGTTATGGAAGCATCAACGTCAAAAGTTTTCAATGGAGGCTCAGACATGTCTTATGATACTTTTAAACAAAAAGTAGGGTGGCAAAGTTAATGAGAATGCTGGTTACTGATTCTTTCTATGAAGATTACAATGGTATTATCAAATTTTTAATTGAGAATAATGCGACGCAAAAGTATATCGCAAAAGTCGAAAGTGAGATTAAACAGGCTTTAGATTCTATTGAGGAAAGTCCATATGGAAATCCTAAAATTGAAGATACGCCGTTTAGGAAGAAAATTAGATTTAAGTATATTACTTTATATGTAATATATGATGAATTTGTTCGTGTCGCTAGAGTTTTTCATGAAAAAGAAGATTGGATAAATGAATTGGACTGAGTGATTAGAGAAATATGGTGGGGAAATCAATTGCTTACTATG # Right flank : ACCGACAGAAGTCGTGTTTTTTATTGACAAAAAATGGTAAAATGAAGTATGACTTTAAAAATCAAGCAGAAAATTCCGCTGAAAATAAAAAAAATCGGTATTAATGGCGAAGGCGTTGGCAATTTTAAGGGGACGACGGTTTTTGTTGCGGGTGCGCTCAAGGGCGAGGAGGTTTACGCCGAAATTGTGACAAGCGAGCGCAATTATGCGACGGCGAAAATGCTCAAACTCAATAAAAAATCGCCTCATCGGGTTGTGCCGATGTGTGAGAGTTATAAGCAATGTGGTGGTTGTCAAATCATGCACCTAGCTTATCCGCAGCAGTTGCTGTTTAAGCAAGATTTGCTCCGCCAAGCGCTTCAAAAATTTAAACCGCAAGGCTATGAAAATTATGAGGTGCGCAAAACGATTGGCATGAAACAGCTGCAACATTATCGGGCAAAATTGCAGTTTCAGACACGTTTTTTAGGCGAAAAAGTTCGTGCGGGTCTTTTTGCGGA # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAATAGCCCCATTCCTCGTTAAAAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //