Array 1 71340-68617 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOMX01000147.1 Actinoplanes teichomyceticus strain NBRC 13999 sequence147, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 71339 30 100.0 31 .............................. ACAGCGCGCAGCTGGGCGTCACGGTGGCCCG 71278 30 96.7 32 .............................T TCACCGTCCCGACCGAGCTGAAGGCCCGGCTG 71216 30 96.7 31 .............................C GGCGCATCGTGCGCCGGCCGACGGGCCCGGC 71155 30 100.0 31 .............................. GCTCGGCGAGGGCCTTGTGTATGGCGTCGAT 71094 30 96.7 31 .............................C TTCTTGACCAGGACGCCGACATGGACTTCGG 71033 30 96.7 31 .............................A AGACGCCGTACGTCTGCAACTCGGGGCCGTG 70972 30 96.7 31 .............................A GCGCAGACGCGGCACGGGAGTTCCTGGACAA 70911 30 96.7 31 .............................C GGGACTTCTCGCACCTGGTCGGCGCGGAGCT 70850 30 96.7 31 .............................A GCGACGTGTGGCGTGCCACGTTCTAGATAAG 70789 30 100.0 31 .............................. GCACGCTCGCCGAGCGGATCACGGAGTGGTC 70728 30 96.7 31 .............................C TGAAGGAGAAGCTGGCCGGCTGGAAGTGGTC 70667 30 100.0 31 .............................. ACCGGGGCGTCGCGCGCAACATCGCGGGCAC 70606 30 96.7 31 .............................A GGCTGAGGTCGGCTCCGCACGGTCCGAGGTA 70545 30 96.7 31 .............................A AAAAGCTCGCGCCGAGCCGGGCGGCGGGGAC 70484 30 96.7 31 .............................C CGTTCGAGGCGGCAGCGAAGCGGTACGAGCA 70423 30 96.7 31 .............................C CGGGCGACACCCTCGCTGCGTTCACCCGGTG 70362 30 96.7 31 .............................T GGTGCTGACGGACGCTCTAGTGCGGGCCGGG 70301 30 96.7 31 .............................A GCCAGGCCCGGCCGGGCGGGAGTTGCTGCAG 70240 30 100.0 32 .............................. GCGCCAAGCGGCGGCCGCCGCGGTGGTCGAGA 70178 30 100.0 31 .............................. TTCCGCGGGCCGGTGGAAGCCGTGTTGTCGT 70117 30 96.7 31 .............................T GGGCCTGGACGTACGCCTCCAGGCCCTCATA 70056 30 96.7 31 .............................C ATTGCCTGGGTGCGGATCTCCTGGGACAGCC 69995 30 100.0 31 .............................. ATGACCGATCAGAAAGCCCCCGACGGTCCGA 69934 30 96.7 31 .............................A AGGACGCGATGGGTGAGTTCGAGGCTCACAT 69873 30 100.0 31 .............................. CGTCGGCCAGGTCCCCGACCGTCCGGAACGC 69812 30 96.7 31 .............................A CCACGCAGTACTGGAACCGGTCGGACTACAC 69751 30 96.7 31 .............................T GACGTTCGACCCTTACCCGAACGACACGCCT 69690 30 100.0 31 .............................. GGCGGGCGAACCGGGGGGCGTTGCGGCGCGG 69629 30 100.0 31 .............................. CGTACCGGGCACGCCACGGCCGGGCCCCGAT 69568 30 93.3 31 ............................TC GTGCGACGAGACGCAGCGATGACCAGGACTT 69507 30 96.7 31 .............................C AGGTGGGCTAGCACCGCCGAGATCGCGAAAA 69446 29 93.3 31 ........T............-........ CAATGCCACACGCCAACCCCGGGCCGCGGTC 69386 30 96.7 32 .............................T GCGCCGCCAGCTCCGGGTCGGCCATCGCGGTC 69324 30 96.7 31 .............................C CGAAGACGGCGAACACTCTGTACGCCCAGCT 69263 30 100.0 31 .............................. CCGGCCGAGGGTTGCCTACTGCTCCTCGTCG 69202 30 93.3 31 ....A........................T ACAAGTGGCTCATCATCGGCGGCGTGCTCGG 69141 30 100.0 31 .............................. ACATCCAGAAGGTCATGGGCTGATGAATCTG 69080 30 96.7 31 .............................C GATCAGCGTCCCGAACGGCGCGACTTTTCAG 69019 30 96.7 31 ..........T................... TCGTGCAGCGCAACGCAGCCGGGGAAGCCGC 68958 30 100.0 31 .............................. TCAACGCGGCGGCCGGGTGGTACGGGTCACC 68897 30 96.7 31 .............................T GGCGCAGCAGCGGCGACGGCACGATCTCCAT 68836 30 96.7 38 ............T................. GGCCGGCCGCGGACAGCTAGACATGCCCTGGGCCCCCG G [68819] 68767 30 93.3 31 ............A................T CCGCGCCGGCACCCGGGCCGCCGAGCCAGTC 68706 29 93.3 31 .....................-.......A AGGGGGACGGGACGATGTCCATGTCCTGGTA 68646 30 90.0 0 ..........G...........C......C | ========== ====== ====== ====== ============================== ====================================== ================== 45 30 97.1 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : ACGAGGTCAACCTCTGGGACGAAAGTGGAGCCGACATACCGGCTGGCTTCAACCACGGGTCCGAGTACGAGGTCGATTTCTGATGACCGTCATCATCTTGACCTCGTGCCCGCCCGGCCTGCGCGGGCACCTGACCCAATGGTTACTCGAGATTTCCGCCGGCGTATACATCGGCCACGTCAATCCACGCATCCGCCGACGACTTTGGCACCGCGTCATCGAACTGTCCGGACCCGGTCGAGCGCTACTGGTCTACCAGCAGCCCGGCGAGCAACGACTGACCTTCGAAACGCACGATCACGACTGGGAGCCGGTCGACTTCGACGGCATCACCCTGATGCGACGTCCGACCCAACGTAGCACCTACAACCCAGCAGCCCCCCAAGGATGGAGCAGCGCTAGTAAACGGCGACGCTTCGCACGCCGATCCCCGAACACCTCCACCACACGGACTGAACAAATTCCGCCAAGTTGACCTATAGAATCCCAGGTCAGGAAGT # Right flank : ATTAATGACGAGCAGGCAGTGACAGTTTCGGGAGGTCATTAGTCGGCTGCCGCTCATCAGCATGATGGAAGGCCCTCACTGGGCAGATCCGTAAACTCGATCATGGATCGGGCAATCCATCTCGACTACGGTCGGTGACTGTGAGTCTGGCGGTGTTCCGCTGATGAGGGAGCAGCGCGGTAGTAAGGAGGCCTTGTCTGGACTGTCTTTCGGCGGTCTTGTGCCTCCGCGCTGCTCCCCACGAGGTGTCTTGCCGAGGTTCTGCGGGGAGCAGGCCTTCCCGGTTCGGCTGGCCGTCGGGCATCGGCCGAGGTGTCGCCGGTGGGGGAGCAGCGGAGGTCTTCCCGGTGAGCGTGTTTGTGCTGCTCAGTATCTGTTCTTGTTGGTTGTGGGGAGCACCGTGGCGATGAATTCCGCGTTTCTGGTGGGGGTCGTGCGGCGCTGCTCCCCAATCCGGGTGATCGGTGGGGAGCAGGTGGGGTGGTTACTGGCAGTGCTAG # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 80842-83988 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOMX01000147.1 Actinoplanes teichomyceticus strain NBRC 13999 sequence147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 80842 30 100.0 31 .............................. GGTAGACCCGCAGATGGTCACGATGAACAGA 80903 30 96.7 31 .............................T GATCGAGGATGTTGCGGACGACGTGCAGCGC 80964 30 100.0 31 .............................. CGGTCAGCACCAGCGGCGCCGGCCAGGCGAG 81025 30 96.7 31 .............................A GGGCCAGGCACTCCACCGCCTCCGGTACCCA 81086 30 100.0 31 .............................. CAGCAACGGCACCTACACGCTGGCCACCAAG 81147 30 96.7 31 .............................T GCATCAGCGACACCGTCGGCGGCGTGCTCGG 81208 30 96.7 32 .............................C CCGGCCACGGCGAGCTGTCCATCCGGGCGCTG 81270 30 96.7 32 .............................A GCAGACCGTGGGCGGCCCTGGCTCGGGCGTAC 81332 30 96.7 31 .............................C CGTCCGCCAGGAAGTTGTGCGGATCGTCGGC 81393 30 96.7 31 .............................C ACGCCCTTGGGCGCCGGATCAGCTACAAGTA 81454 30 96.7 31 .............................A GTGGCTTACGGTGGTCCCGGCCTACGGTTGT 81515 30 100.0 31 .............................. CGGCAGCCAGTACGCCGATGAACGACATGAT 81576 30 96.7 31 .............................T GGCTCAGCAGGATGAACGGCTCGCAGCCAGA 81637 30 96.7 31 .............................T GTTTGGGATCGTTGATCCGGATCTTCATGCG 81698 30 100.0 31 .............................. AGCGGATCCTGTCCCCTAGAACACGGCAGTG 81759 30 96.7 32 .............................A GGCTCGCCGCGGTGTGCTCCCGCGGCTGTGGG 81821 30 100.0 31 .............................. GAGCGCTGATCGCGGTAGCAACGGAGGCGTA 81882 30 96.7 31 .............................A CCACGCTCAAGGACGTGCCCGGCGCGAACAT 81943 30 100.0 31 .............................. ACGCGCCGAGCATCGCGGTCGGGATGATGCG 82004 30 96.7 31 .............................T GAGAAACGGACGGGGCCGGCACGCCCATGCC 82065 30 96.7 31 .............................C TGCCCTGTTCGCCGGGGTTGATGTTGAACCT 82126 30 100.0 31 .............................. ACGATGCGGACGCTGGCGAGTGGGAGGACGA 82187 30 100.0 31 .............................. GCTGGTCGCGGACATGCAGCGCGATGCGGAG 82248 30 96.7 31 .............................C GCATCCCTCACCTCGGAGGTGTACTAGTGGG 82309 30 96.7 31 .............................C GGCCGGCGACGGCCCGCTCGTCGCGGGTTTC 82370 30 100.0 31 .............................. TCCCGCGGGCAAGACGCCAGATGCCGGACGC 82431 30 96.7 31 .............................A ACCGCACGAACCCGAGGGCAAGGAATCCTTC 82492 30 100.0 31 .............................. GGGTCGAGCAGGGTCGCCGGCCAGCGCACGA 82553 30 100.0 31 .............................. TCCGAGCCAGCGCTCCCGCTCGGACCTGCCC 82614 30 100.0 31 .............................. CGTTCGACTGCTCCGGGCTGATGCAGTGGAT 82675 30 96.7 31 .............................T ACCCCGGGGCGTTCACCGGCGCCCTGCACGT 82736 30 96.7 31 .............................T ACGTCGCGGGCGTGGCGGGCTGGTCGATTGA 82797 30 100.0 32 .............................. GACAGCAGCGCCGCGAGCAGAGCGGTGGTGCC 82859 30 100.0 31 .............................. GCACCACCGTCGACCTGTCCGGGATCGGGCT 82920 30 96.7 31 .............................A CGCTGATCCTCGGCATCGTCGGTGCTGCAGG 82981 30 100.0 33 .............................. GGCTTGGGCTGCGCGGGCAACCGAACCCCTGGT 83044 30 86.7 29 .CC.C........................C TGTTCGATAAACCGAACAGTCAGGAGATC 83103 30 100.0 31 .............................. CGGCCTTGTCGGTCACCGGGTTGTGGTAGGT 83164 30 96.7 31 .............................C GGTGGTCGACGGCCTTACGGCCGGAGTGACA 83225 30 96.7 31 .............................T CGACCCGGCGTCAGGCCCGGACGCCCCCCGT 83286 30 96.7 31 .............................A CGAGGTCGCCGGGGCGGGGGTCGGTGATGGG 83347 30 100.0 31 .............................. GGGTCGACTTTGAAGGGTCGATGACCGGCAA 83408 30 100.0 31 .............................. GGTTGGCCGCCGGGCAGTCCGGGCAGTCGTT 83469 30 96.7 32 .............................C GGATGATCCGGAAGATCACCGATCCGCAGGGC 83531 30 100.0 32 .............................. CCATGACGCGCCACCGGTACGACTGCCCGCCG 83593 30 96.7 31 .............................A CCCGTGACACCGCGCGCAGCTCGGCGATCAC 83654 30 96.7 31 .............................A TCAAGCAGGACGCGAAGAAGCGGATCGGCTA 83715 30 93.3 31 .............G...............C CGGGCACCGTCACCGCGGTCGCGGCGCCGGC 83776 30 96.7 31 .............................T GCGGGTCACCGGCGAGACTTTGAAACTCGTC 83837 30 96.7 31 .............................A GCTCGGCATCGTCATGTCGGTGCTGGAGATC 83898 30 93.3 31 ..........A..................C ACTGGTCGCGCACCCTCAACGGCGCCGGTCG 83959 30 93.3 0 .......T.....................C | ========== ====== ====== ====== ============================== ================================= ================== 52 30 97.6 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CCGGTGTGGCCTTGCCGATGTCGTGGACACCCGCCAACCATTGAACGAGAACCCGGCCATCCGCAGCACCTAAAGGCATCTCGTCGGCGATTCGCTGACGAACCGCCATGGGCAGCCACTCATCCCACAGCGACCCCGCAACCTCGGCCGCATCGGCAAGATGCCTCCACAACGGAAGCGGCTGCACCTGGTCCCCCGACTTACCCCAGACCGTCCGCGCTGCGGAACTCAATTCGGAAGCGATGTCCACGGCTGCGGATTCAAGCACGGAGGTATGACGGTTCCCCAGACGACCGAGGCGCGCCTTCTACCCGTATAAGCAAATAGTTACTTTCTGTCGGTATCGATACTTCTTCCAGGTGACGTAACATGCGTTGGTCTCAGGGGCAAGCTCGTCGGCGGTAGGAGGGAGGGGAGCCATCACGCCCTATGTCGCCTCTAACGGGAAACGAGTGAATAAAAACAACACTCAGGCACTACATTCCCGCAGGTCAGGAAGT # Right flank : CGGTACACCCGGGCGTGGCTCACGCCTCCGCCGTTTTTGGGCCACGACCGCCCGCCGGCCCCGGTGACCACGCCAGCCCCCGCGTCGACGCGTTCGGCACCACCACCGTCGCCATGTACCGCATCAGCGTCGACGCCGCCCTCGGCGACACCGGCACTGCCCTGCAGCACGCTGCCAGCGTCAACTCTGCTGCTCAATTTTTTTGGTCAGAGGATGGTCCACGCGGTGAGCTCGCGGCTCCCTCGCCGTAGGCCTGCAATACGGCGGTGCACCTCTGCCGCTGCCGGTGTGCCTGGCAAGGACTTGCGTGCATTGGTAGTAATCATCTGCAGCTCACGGAGCTGACACAGGTCCTCGAACTCAGCCCAGTGTCGAGGGTCCCAGCCGTAGGTTTGAACGAAGGCGTCGAATCCGTGATCATTGCCGAATCGGCGGCAGTGCACAGCTACCGTGGCGACATCCCAGACGCGGTCGCCGATGCGGGCGCCGTCCCAGTCCGC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //