Array 1 121679-121174 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCMA01000005.1 Acinetobacter baylyi strain GTC 3695, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 121678 25 89.3 32 ---......................... CAAATGTAATCAGGATTAGTCGATTGCAGCGT 121621 28 100.0 32 ............................ AGATCGCCTGTGCGTAGGTCAACTGCACCATT 121561 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 121501 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 121441 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 121381 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 121321 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 121261 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 121201 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.4 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : TATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 32074-32461 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCMA01000001.1 Acinetobacter baylyi strain GTC 3695, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32074 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 32134 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 32194 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 32254 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 32314 28 100.0 32 ............................ ATTCACCGTGACACGTGTACCCGCCGTTTCTG 32374 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 32434 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : ATTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4320-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCMA01000006.1 Acinetobacter baylyi strain GTC 3695, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4319 28 100.0 32 ............................ GACACCAAAGGTAATAAAGCTATGAAAGAATA 4259 28 100.0 32 ............................ TTTACTCTTATTATACTATTACCCCTAACCCC 4199 28 100.0 32 ............................ TCCAGCTAAAATCGTTTGAGGGTGAAACTCCT 4139 28 100.0 32 ............................ ATGATTTCGAAAGGCTCTCCGAGTACGTTATT 4079 28 100.0 32 ............................ ATTCCCAGCATTCACGCTGAGTGCTTCGGCAC 4019 28 100.0 32 ............................ TGTGCAGCCGTTTGGCGCGCCCCAGATATGCG 3959 28 100.0 32 ............................ AGGAACCGTGGCAGATTGCGTTAATATGTTAG 3899 28 100.0 32 ............................ TAACGATGGAATAACGTTCAAAGAATCTAACG 3839 28 100.0 32 ............................ AATTCATGAAAGATCATTCGCTGTGTTTGGGG 3779 28 100.0 32 ............................ ATTTGCCGCTTTGAATATTTGATGCACCTGCT 3719 28 100.0 32 ............................ AAATCGATGAGGGACAACATCAGGCACTCGAC 3659 28 100.0 32 ............................ ACAGGGCAGGGAAATAACCAAAAATCGATATA 3599 28 100.0 32 ............................ GACATAGGAACGATATGAAGATGATTTTTTTT 3539 28 100.0 32 ............................ ATCAAGCTATCGTCATTTGGCCGATACACAGC 3479 28 100.0 32 ............................ TCTGCCATGCATACAATTTGATTTGGCTGCGT 3419 28 100.0 32 ............................ AATCATCAATATCTTTTTGCGCTTTGCGTGAA 3359 28 100.0 32 ............................ TCTCACGTACAAAAAAAAATCCTATTTGATGT 3299 28 100.0 32 ............................ GCGATTGAATACCGATAGATCGGGGATATTAA 3239 28 100.0 33 ............................ ATACACTACATTGAACTGCTCGGACTTAAGCAT 3178 28 100.0 32 ............................ AAAAAAAGTGTAGCCAACTTCATACAGTTACC 3118 28 100.0 32 ............................ CAGGTGGCAGCGTTCCATTTTCGGGGGCAAAT 3058 28 100.0 32 ............................ AAAACCACATTATAAGGCTCGGTAAATGTGTA 2998 28 100.0 32 ............................ ATGAAAATAAGCCCCAATATTGTCAGTGTTCC 2938 28 100.0 32 ............................ GTTTCCGCGTCATTCGGGTACAGTTGCGACAT 2878 28 100.0 32 ............................ TTGAAACCTATGAACTTTGTGTTATACGTGTC 2818 28 100.0 32 ............................ CTTATCAAAATCGGTGGGATCTTTGTCGTACT 2758 28 100.0 32 ............................ GAATTATGCTTTAAAAAATCCTTTCGCGGGTA 2698 28 100.0 32 ............................ AATCCGATTTCTGCTGTTGCTGGGGTTAGAGC 2638 28 100.0 32 ............................ ATGTACTATAAGTCACATGGTAAAGACACGAA 2578 28 100.0 32 ............................ GAAACGTTGAATCCAGAACCAGCAATCCCAGC 2518 28 100.0 32 ............................ AAACTGTGGAGCATTACATCTACCATACTGCC 2458 28 100.0 32 ............................ TAAAACAGTCAATGTTAATTGGGGTGAACAAT 2398 28 100.0 32 ............................ GCGGTAGCTGGCGCGGTGTTTGCGTTTTTTGG 2338 28 100.0 32 ............................ TATAACTAGCATGTCAGAAATAAAACTATCCG 2278 28 100.0 32 ............................ CGTTGGTACTGTTGCAGGTGGTGCATTGGGGA 2218 28 100.0 32 ............................ GACTCCGCTACTTAAGAAAGAGAGCATAGGTG 2158 28 100.0 32 ............................ TAGAAGTAACTTACGATAACATCTTTGGCGCC 2098 28 100.0 32 ............................ TCAAGCATGTGATCACTAATGATTCGGTTTTT 2038 28 100.0 32 ............................ TATACTCCTTATATGTAATTTACGCGTAAACC 1978 28 100.0 32 ............................ CACTACATTTATACCCGCCGTTTACGCTCTTA 1918 28 100.0 32 ............................ GTTTAATGTGGCGTTCAGGTCTTGTTCGCCAA 1858 28 100.0 32 ............................ ACTCAGTTGACCAATCTTACTGCTTCACTTAA 1798 28 100.0 32 ............................ AGAAGATTTGGTGGGCAAAAATATGGAATATA 1738 28 100.0 32 ............................ ATTCTTAGCTGCATCACGCAAGATTTGCTTTT 1678 28 100.0 32 ............................ CTCATCGAAACATACATTGAGAAAAATCATTT 1618 28 100.0 32 ............................ AATCATCATCGACCGCAGTATTGAAGCGAAGC 1558 28 100.0 32 ............................ AGCCCTTCGTATATTTGAATAGTGCATTGGCT 1498 28 100.0 31 ............................ AAAAATACCCGCGCCCAAGTGATCCTGAAGA 1439 28 100.0 32 ............................ AACCATATAGAATTGTTAACTTTTGTAAATAA 1379 28 100.0 32 ............................ GATCAAAACAACAAGCGTACCAATGATGCCGA 1319 28 100.0 32 ............................ ACAAGGGATGTATTGACCAGGTGTGAGCGCAA 1259 28 100.0 32 ............................ ATTCTTGAGCCGCCTGCAGATTTGTTATGTCA 1199 28 100.0 32 ............................ ATGGTTCGGGGTTGTAGCTGTACGCCCCAGAT 1139 28 100.0 32 ............................ AAGAGCAAAAGGTAACTTGGATCTACCGCCAC 1079 28 100.0 32 ............................ CACGGAAATTGGAATGATGATTTCGACGGTAA 1019 28 100.0 32 ............................ TTGTTGAGCAGCAGAACGGCCTTTTACCAACC 959 28 100.0 32 ............................ AGATACCTCAGTCCAAGCTGCTGAATTTTATC 899 28 100.0 32 ............................ AAGAGACAACAGGGCTTATTAAAGTAACTTGT 839 28 100.0 32 ............................ AAGTTTTATTTAAGCCCAAAGCTAAAGATAGT 779 28 100.0 32 ............................ GTTAGCTGCACAAGCTCTGGGACTTTAATAAA 719 28 100.0 32 ............................ AATCGCTAACCAGTAGAACCCGCGTAGCAGCG 659 28 100.0 32 ............................ AAGCGTTGCGAGCGCTCAAAAAGTGGCTGATC 599 28 100.0 32 ............................ GTCTACCAAAGCGAAAGTATCATTTTCAATGA 539 28 100.0 32 ............................ TGTATCGGAGCTACGTCAGAAGGTCAAGCACA 479 28 100.0 32 ............................ AGGTCGATTTATCATAAACATCGGGCACGATA 419 28 100.0 32 ............................ GCCAGAAATTTTGACACTTGCGTTTAGCAATA 359 28 100.0 32 ............................ AGATTGTCTCTAAATTTAACGCGTGGCTTTGT 299 28 100.0 32 ............................ AAAGCCGAGCCCAACTTTTGACGCACAAAAAG 239 28 100.0 32 ............................ GTCAGTGATTGCTTTCATTGCCGTAGCTACGT 179 28 100.0 32 ............................ ATCCGCGCCCAATTTGTCCCACCAATCTTTTT 119 28 100.0 32 ............................ GATTCCATAGAACGTACCATTGACGCGCAACA 59 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 72 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCCTACCTATCTTGCATGGTAAAACACGCCGCGGAGGTTTAGTGTTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCAAACAATTAACTCAAGTGATTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATCAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : ATGGATCTCTGCAGAAATCACATTGTCCAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 79975-79351 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCMA01000006.1 Acinetobacter baylyi strain GTC 3695, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 79974 28 100.0 32 ............................ AGTCGACCGCGAGACGGGAAAAAGTACGAACA 79914 28 100.0 32 ............................ CGTAGACTGCCACCACCGCACCCCCATACATT 79854 28 100.0 32 ............................ TCGCGCAATCCATCGCGAGGGGCCTATTCGAG 79794 28 100.0 32 ............................ AATGAGAAAATCAAACCACCCATGATGATCGT 79734 28 100.0 28 ............................ TACTCGAACTTGTCTGTCATATTGCCCT 79678 28 89.3 32 TAC......................... TGAATACTCAAATGACAATAAACAGGATAAAG 79618 28 100.0 32 ............................ TGTGAACAAATCCGTTGTAAGCCGCGCCTTAT 79558 28 100.0 32 ............................ ATTTAAAAGCCACTCATCTGACACACCTAAAA 79498 28 100.0 33 ............................ TTATCGAAGTATTCTGCTTTGGGTGCGGCAATG 79437 28 100.0 32 ............................ ACCAGAAATGATTCCAGATATTCCAGATGAAT 79377 27 82.1 0 .C......T..............-..TC | ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.4 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCACCAATCAAGAGTGGATTGGTCAATAG # Right flank : AAGTAAATTTTGATCAAACATTTAAAGCATATTAAAATAGTCACTTAAATTATCAATCAAACATTACTTTACTGATTCATATCAGTTTTTCTAACGATAGATAACAAAATTTTGAGTAAAAGAAATGACTGCATGGCAACAACTTGGGATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAAGATTCTCTATTTAATGATGATCAGCCACTAAATTTTAATGAGCACACTGAATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTACTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCGTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCATC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //