Array 1 2126054-2121450 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXV01000002.1 Corynebacterium striatum strain NCTC764, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2126053 29 100.0 32 ............................. ATTTGGGATGGGTCTGTGCGTTCAGGTAAGAC 2125992 29 96.6 32 ............................G TGATGGGGTTTAGCCAGAAGCAGAAGGATGCG 2125931 29 100.0 32 ............................. GGGACCAGGGCCACGGCCTTTAGGAGGCCTTC 2125870 29 100.0 32 ............................. AGTTTGTTAGTGGCACTGCTACCGGCTAGCCC 2125809 29 100.0 32 ............................. ACCGAGCCGATGAACACTAAAGCTCGGTAGTT 2125748 29 100.0 32 ............................. ACTAAAGCTCGGTAGTTCCCACACACAGATAG 2125687 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 2125626 29 96.6 32 ............................T TTGAGCAGATGCCGGGCCGTGTGGGGGAGATT 2125565 29 100.0 32 ............................. ACCAAAAGGGCTATTTCCTTGGTATGGAAATA 2125504 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 2125443 29 100.0 32 ............................. ACCCGCGTTGCGCAGTTCACGGAACAACCAGT 2125382 29 100.0 32 ............................. GGGTTCTGGAAATGGAAAGGCCCAGCCCACCA 2125321 29 100.0 32 ............................. CCTGGATGAGGTAGCGCACGACGTCTTAGAGA 2125260 29 96.6 32 ............................G GTCTTCACGCGTGAGTTGCTTTGCTGCGCCTC 2125199 29 100.0 32 ............................. CTGACCGGCGGCCAGACCGCGACGTCCTACAC 2125138 29 96.6 32 ............................T CTTTTTGTTGGGGCGGTGGAAAGACTGATAGC 2125077 29 96.6 32 ............................G GTAAAGGAAATGTACTGGGCAGGCCGAAAGGT 2125016 29 100.0 32 ............................. TAAAAACACAAAGACCGGGAACACAAATTTAA 2124955 29 96.6 32 ............................T AGGGATGCGGTCACCCCGTTGGTGATTCGGCC 2124894 29 100.0 32 ............................. ATCGCATTCCACCGTGTGAAACCCAACGTACT 2124833 29 100.0 32 ............................. GGGCGCTGCTTCCACCCATCAGCAGGACCAGG 2124772 29 100.0 32 ............................. AATGAGGCCAACCGGCCCCATAAGCACAGCCA 2124711 29 96.6 32 ............................A GCATGTGCGCGGCGCTCGACGGCGGGAGCATC 2124650 29 100.0 32 ............................. TCACCACACAAGGCCCAGACTTCCAAGCCCTC 2124589 29 96.6 32 ............................G CCACAAGCGGCGGGCCATATCCTAGGTATTGA 2124528 29 100.0 32 ............................. GTGGTGTACCACTACCTGTCGCGCAACCTGCC 2124467 29 100.0 32 ............................. TACTGGCATCCGTTTGGGTGTTCCTGATGGGT 2124406 29 100.0 32 ............................. GACCTGGGAGCAGACCCACGCCACGGCATCAG 2124345 29 96.6 33 ............................A CCATCACACCGGCCGCCCCCACCGTCTTCACCG 2124283 29 100.0 32 ............................. CATGGGTAAATCCGGCGGTGTCCGGCGTGAGC 2124222 29 96.6 32 ............................T GCTCGCCGTAGCTGCGTGTATAGCTTTTGGGT 2124161 29 96.6 32 ............................T CCTCCGCTGGGGATGGGGAGAGTAAAAATGAA 2124100 29 96.6 32 ............................G TCTGGTTCGCGCATGCTTGAGACGTTGAATGC 2124039 29 100.0 32 ............................. CCGACGATGGGGGCGGCTGTCGTGGTTGCCGA 2123978 29 100.0 32 ............................. ACAATCGCAACAACTGCTCATGAGACTCACCA 2123917 29 100.0 32 ............................. AACTTCAGCCGACGCCTGTGGGAAACGATCGG 2123856 29 96.6 32 ............................G TCGGCGCACTGTCCGAGGCTTTAGATGGCTTC 2123795 29 100.0 32 ............................. GCAGCGACTGCAACATCTTGGGAGACGTGGCC 2123734 29 100.0 32 ............................. CATGACTAAGACCCTCGCAGACATGACCCCAG 2123673 29 96.6 32 ............................G GCTTCAGCTGATGAAGCTGGAACCGCGTTTCA 2123612 29 100.0 32 ............................. ACTTCAGACTGCGAGCCGTGTTTGAAGCCCGC 2123551 29 96.6 32 ............................G GCCACGCGGCCTGCACAATCTGTGATGTTTTC 2123490 29 96.6 32 ............................T CCCAGCTCGCGGGCAGCATCCGCCGCGCCAGA 2123429 29 100.0 32 ............................. TCCGTAAGGAAAACGCGAAGTACCGTACCGAG 2123368 29 100.0 32 ............................. ATCCTTAAGCGCCGCATTCGGGTACGTGCCAA 2123307 29 100.0 32 ............................. ACAGCACCGACGCTGTTCTGAATCTGCTTACC 2123246 29 100.0 32 ............................. TCGGCAAAAAACTAGCCCCCGACCGATTCCCC 2123185 29 100.0 32 ............................. TCGACGCAATCACTGGCGACTGTCATGAAAAC 2123124 29 100.0 32 ............................. ACTCTGACGGCACCGACCATCAAGGAGTACGA 2123063 29 100.0 32 ............................. ACCGGCTTTAACTGGAAATGGGAGGAAGCATG 2123002 29 100.0 32 ............................. GTAAAAGGGGGAGGTGCCTGATGGACTCGATT 2122941 29 100.0 32 ............................. CAGGGCAATGACCCGACCGCACGCACCCTCAA 2122880 29 100.0 32 ............................. GATTCGTAGACGAGAAAGACGCGGCTATCGTC 2122819 29 100.0 32 ............................. CCTGTTGAGCTGCTTTTTGGCTTCCAATGGGG 2122758 29 96.6 32 ............................T TGAGTAGGGCGTTTAGGAGTGTGGTATCAACC 2122697 29 100.0 32 ............................. CCCACGACTTGGCCCCAGGACACGATGTCATC 2122636 29 96.6 32 ............................G GAGGGTGCCCTGTCTGCCAACAAGATCGGCAC 2122575 29 100.0 31 ............................. CCCACGCGAACAGAAGCTAAAAGAGCGTGAA 2122515 29 100.0 32 ............................. ACCCCGCCGCGCCCGCTGGTACATGCTCCCCA 2122454 29 100.0 32 ............................. CCAATACCCATACGGGGCGAAACCTGAATCCG 2122393 29 100.0 32 ............................. TCAGCACCGACGCGTGGGAAAGTAGAAATGAC 2122332 29 93.1 32 ..........T.................G GGTTGGTTTACCTGTGATTAGGGCGTGGAGTT 2122271 29 100.0 32 ............................. AATGCGCCGTCCACGTCCGGCCGTGAGCTGGC 2122210 29 100.0 32 ............................. CAAGCAGGCCATCCACACAGCTGTTGTGGAGC 2122149 29 100.0 32 ............................. ATTCCGGCAACCTTGGATAGGATTTGCTCGGA 2122088 29 96.6 32 ............................T CTACGCCTGCACCAGCCCCACCTACCGACAGG 2122027 29 100.0 32 ............................. AAGAAAGGCACCCGCGACGGCGGCAACCGTCC 2121966 29 96.6 32 ............................G CGACCGGCTGGAACGGTGCTCTAGCAAAGACT 2121905 29 100.0 32 ............................. AGCGGTATCCCATGCGGAAGAAATCTTATTAG 2121844 29 100.0 32 ............................. ACACGGCACTCGAAGATGCGAAAACGGATCTG 2121783 29 96.6 32 ............................T TACGCGATATGGAACTGGATAAGCTCAACCAG 2121722 29 100.0 32 ............................. CAGGCGGAGAAGCCATGTCTTATGAATACGCG 2121661 29 100.0 32 ............................. TTCACAAAATTCTCTCGGTCTGGATGCGCGCT 2121600 29 96.6 32 ............................T ACGCTTGTGTGCGCGTACGGGATGCCGGGTAG 2121539 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCAGCCGCT 2121478 29 89.7 0 ................T.....A....G. | ========== ====== ====== ====== ============================= ================================= ================== 76 29 98.7 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGCGCTGCCCGAAATGCTCGTCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : TTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATACGAGCAATCCCCATTTATGTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGGGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGGGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //