Array 1 12357-7873 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRBS010000017.1 Aeromonas schubertii strain CHULA2021b aero_3_contig_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 12356 29 100.0 32 ............................. GACGACGAGGCTGTGAGGCGCTTCACTTTCGT 12295 29 100.0 31 ............................. TCGCCAGCGTGATTGATGCGATGGCCGTCAA 12235 29 100.0 32 ............................. TGCTGCAGGGTCTTAAACATAGGTCAGCGCCC 12174 29 100.0 32 ............................. CAGCCGCTGAGCAAGCCGGCTACCGCGTAGCC 12113 29 100.0 32 ............................. GAGCCACCATGCCCGAGCCCATCTCATCCAGT 12052 29 100.0 32 ............................. CAACCAGAGATCCATGCGTCGTTTGAGGAGAT 11991 29 100.0 32 ............................. CACATTGATGACATCACATGGCGACGGGTCGA 11930 29 100.0 32 ............................. TCACGCTTGGAGCCTTAACATGTCCCTGTGAC 11869 29 100.0 32 ............................. ATGTCCCGGGGCAGCCAACGGATGATGGTGCG 11808 29 100.0 32 ............................. TGGTTCATAGCGATGACGCTGTGATGGTGGAG 11747 29 100.0 32 ............................. CAGTGTCGAGGCTTCTACGGGGTGCGCCTGAG 11686 29 100.0 32 ............................. GTCATCCAGGTCGTTCTCGCAGTACGTGCCGA 11625 29 100.0 32 ............................. TGTTACCTGCAGGCGTTCCCGGATTCCTGCAA 11564 29 100.0 33 ............................. CGGTTGCTGTGTCGGAATGCTGCCTACGCTGGC 11502 29 100.0 32 ............................. CGCCCCTCCGTTCCGTTTCGCAGCGCTGGATA 11441 29 100.0 32 ............................. AGCGCGAGTTGTGCTTTAAACCTGTGGAGGAC 11380 29 100.0 32 ............................. CGGAGAAGGCCAGGCTTGCGCCTGCTAATTTG 11319 29 100.0 32 ............................. TACTTCATCAGGCGGTTGACCAGCTTCTGCGC 11258 29 100.0 32 ............................. TGGTGAATGCGGCCGGTGGTGAGTCGCTGACT 11197 29 100.0 32 ............................. CCCACGCCAGAGAGTAGAGCAATAGTCATCAT 11136 29 100.0 32 ............................. TTGGGATGCTGGGTCATGATAGTGAAATCGAG 11075 29 100.0 33 ............................. CTCAAAATCGGCCATTCATGAAACTGTTTGAGA 11013 29 100.0 32 ............................. CATCATACGGGCGCCGATACAAACAGGGCGAG 10952 29 100.0 32 ............................. GCTCTCATTATGACCTCCAAAACACTATTGCA 10891 29 100.0 32 ............................. CAACGCCGTCCAATGAATGGCAGTTCACCGTT 10830 29 100.0 32 ............................. TAGCCACATGTGTTGCACCTGTAGCTGGCCGA 10769 29 100.0 32 ............................. TGAGCTGGGTGGTCAGCGGCCGCAGCAAGACC 10708 29 100.0 32 ............................. GCCAGCTGGTTTTGACGCAGGCCAGCGAGCAG 10647 29 100.0 32 ............................. TCATGGCCCACGCCAGAACGACACCGCCCGAC 10586 29 100.0 32 ............................. GTCTTTCCACTCTCCGTTACCGTAATTCAATT 10525 29 100.0 32 ............................. AGTATTCCTGTAGGCCGACGGCTGAAGTCGTA 10464 29 100.0 32 ............................. AAGAGATTGACATGGGAAAACCTAACATCACA 10403 29 100.0 32 ............................. CTTCATCCCTGCACGCCGCCATTGTTGATCGC 10342 29 100.0 32 ............................. ATCATACTGACGCTGAATCCACTTGGCGTTAG 10281 29 100.0 32 ............................. GGGGAAACATGACACCTGCTCGCCGTCACCGT 10220 29 100.0 32 ............................. GGGCTTCGCGCAGAGTTGTGCCGCCTCCCAAT 10159 29 100.0 32 ............................. TCGACGGGGATCTTACGGTTGAGGAATTGTGC 10098 29 100.0 32 ............................. GAATCCTGAGTCCGAGAACGAGAGTAAATTAT 10037 29 100.0 32 ............................. CGGTGAGAACCAGTGTTTGCTGGTAGGAGTCC 9976 29 100.0 32 ............................. GCGGCCCTGATCGCCCTCTATCCGGCAGATCA 9915 29 100.0 32 ............................. CCGTTTGGATTCGTTTGGCCAAGGAGAAAGGA 9854 29 100.0 32 ............................. GTCTCTCCACTCTGCGTTATCGCAATTCAATT 9793 29 100.0 32 ............................. CGCAGACCCGAGGCGCACCGCTGGGATCTGGT 9732 29 100.0 32 ............................. GAGTTCACGCCGCCCGTCTATGGCGAGGCCTT 9671 29 100.0 32 ............................. GTTTCCCGCGGCCTCGAGCTGCAGGCCGCGCA 9610 29 100.0 32 ............................. CAACTTCACATGGCCACGGCTGTTCACCCAGA 9549 29 100.0 32 ............................. TTCAGATCGATACTGTGAATGTTGGCGTTACC 9488 29 100.0 32 ............................. GTTCGCTGGTGGTGACGGATTTTTCGTCTTGC 9427 29 100.0 32 ............................. AATGAGTCATTCACCGTCACGCTGCCGTGGCC 9366 29 96.6 32 ......G...................... ACCATGACCCTGACCACCGAGAACGGCATCCC 9305 29 100.0 32 ............................. AGCGCGGCTTGTTTGCCGTTGATGGTTGCAAT 9244 29 100.0 32 ............................. CATGTCATTGGCGTGGCGGCAAACCTGGCTGT 9183 29 100.0 32 ............................. TGCACCGACCGCATCCTGCCGAGACTCTCCGA 9122 29 100.0 32 ............................. GCTTCGGCTGTGAACTTCATCGCTGTAACCGG 9061 29 100.0 32 ............................. TCGATCCACAAAACCCGGGGCAGTTTATCGTT 9000 29 100.0 32 ............................. ATTAGCTCTGTCGGCCAGAATGTAGCTTTCCG 8939 29 100.0 32 ............................. GCGTAAACAAGGCGATCATCCTTGGTCGAGTC 8878 29 100.0 32 ............................. GGGGGTTACGGGGGCACAGGGAACGTTCTGGC 8817 29 100.0 32 ............................. CCAAAATCACGCTGTTGCCCAGGTAGAGTCCT 8756 29 100.0 32 ............................. TAAGCACCGCCCTTACTGACTCGGCTACTGAC 8695 29 100.0 32 ............................. GCGTTCAACCGTTACAACGACGGTGCGAACCT 8634 29 100.0 32 ............................. CGACCCGACCTCATCCCGCAGGTTCACGCTAC 8573 29 100.0 32 ............................. ACGGCATCGTCATCACCGAAGACCTGTTCGAT 8512 29 100.0 32 ............................. CTGGTGGACGGTACCGACGTCGACGGCTTCGA 8451 29 100.0 32 ............................. CGCTGACGCTCGACTTCGCCAAACAGACTGAC 8390 29 100.0 32 ............................. ATGGGAATTGGTATCGTGATAGAATAGATGTA 8329 29 100.0 32 ............................. GGGGTTTGCTATGAGACCCCCGATTCATTTCT 8268 29 100.0 32 ............................. CGTGACACCCTCGACACGCTGACTCCCAGCAG 8207 29 100.0 32 ............................. GATATCGAGATCCAGCAGGGTGCCAGTATCGT 8146 29 100.0 32 ............................. CGGCGATGCCCCCTGGAGAGGTGACTTCCGGT 8085 29 100.0 32 ............................. CCAGTTTGCCGATGCGCCGGTGTTCACGAGCG 8024 29 100.0 32 ............................. CAGGGGACGCAAAGGCAAGGGGCTAAGGGCAA 7963 29 96.6 33 .......T..................... GTTAGGCTTGGTGGTCGTAGGATACACCCAAAC 7901 29 82.8 0 ............TTT........A..G.. | ========== ====== ====== ====== ============================= ================================= ================== 74 29 99.7 32 CTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : CCGCTGATCGAGGAGGTGCTCTCGGCCGGGGGCATCACCCCGCCCGAAGCCCCCGCAGATGCCCAGCCCCCCGCCATTCCCGAACCCGCCGGCATGGGGGACGCCGGTCACAGGAGTCAGTGATGAGTATGCTGGTGGTGGTGACCGAAGATGTACCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTACGTAGGCGATGTCTCGCGCCGGGTGCGCGAGATGATTTGGCAGCAGTGCGAGGCCTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCTGCCAATAATGACTCGGGGTTTGACTTTCAAACCCTGGGCTCTAATCGAAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCTATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGATTAGTCGGTGGCTTTTTTATGGTTGGAAAAAGCCATCAAAATCAATAGCATCTGTTAAGT # Right flank : GGGCGCTTGGATATCATCCTGTGTCTTTCTCCCCCTCTCACCCCTCCCTTTATCAATCTGATAATCCCCGTCCGCTTTTTATCATTTTTGCCGCGCGCTGCTTCTGCTCACCTCTGCGGTGGGTGGGGGGAGGGGCGGCTTTTTTTCTGGCCGCTCCCCTGTCCGGGGGGGAGGGGCTGCCGGCGCGCAGGCGTTGTGTGAACCGGGTCACGGGAATGGGGGATGAGGGGAGGGGGAACGGTTATTTCGAGTGCTTGGCACGCTTATTGATTGCCCCTCATGGACCGCGCTTTCGAGTGTTCACCCCTTTTCATTGTGATGGTGGCATTCGTTATTAAAGAGAGAGCGCCATCCATATTTTCATCCAATGAGTGGGGCGAATGATGAAAGACGTGAACCAGTTAATTAAAGAGATAAAAAACCTCAAGTCAGGGCTGCATGAAAAAGATTTTCTGCTGACCTGGGAGCAGACTCCCCAAGAGTTGGAGCTGGTATTGAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //