Array 1 177351-173722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVBV010000002.1 Raoultella sp. RLT01 NODE_2_length_748109_cov_32.972767, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 177350 29 96.6 32 ............................T GCGATCATGAGTTTGTGGCACAACCGTGTACT 177289 29 100.0 32 ............................. CCGGCGAAGAAGACAAGCAGGGCGGAGGCGGT 177228 29 100.0 32 ............................. CTGGCGGGGCAATTCTGCTACACGTTTGACTC 177167 29 100.0 32 ............................. GCTGATACAGCTTCGCTAATCGCTAGGGTTAA 177106 29 100.0 32 ............................. ATGTTTCCGGCGGGACATTCTGGGTCTGGGTA 177045 29 100.0 32 ............................. GCCGACTGATAGGTTCCTGTATCAATGAACGA 176984 29 100.0 32 ............................. CCACCGTCGAACTCTCTGCAGTTGCTGGACGA 176923 29 100.0 32 ............................. CCATCGACAGGATGGTGATAGCTTCCGGACGG 176862 29 100.0 32 ............................. CCGCCGGCCAGCGCATCAATCCACTTACCGAG 176801 29 100.0 32 ............................. TGCTTTTCTGCAGTGCTCAGCAGCTGAGAATC 176740 29 100.0 32 ............................. GAACCAGCTGCGTTAGTGGTTGCCATCGGGTT 176679 29 100.0 32 ............................. CTCATTTGGCCCCCTCGCGCAGCTGCTTGGCG 176618 29 100.0 32 ............................. CGGTACTGGTCGAAGGCGATCGCCTTTATATC 176557 29 100.0 32 ............................. TCACCATGAACCCGGAAGCCGCACAACTTCTT 176496 29 100.0 32 ............................. CGAGTTCAGCGCGGATGGCACGCAGCATACTG 176435 29 100.0 32 ............................. AAATCATGGTGCATCACCGCCGCCATCTGGCT 176374 29 100.0 32 ............................. GCGGCGTTCTCATCGACCACGAGACCGGCGAG 176313 29 100.0 32 ............................. GCAGCGCGAAAGTAATTTGATTACACGCCACC 176252 29 100.0 32 ............................. GTTTCGAGAGCCTGTAGTGCTGCTTTAGGGTC 176191 29 100.0 32 ............................. CGTTATCGTCGAGTCGCTTCTGGTCATCTCTG 176130 29 100.0 32 ............................. CATTCAGTGTGCTCGCGGTCAAGGATGAACTC 176069 29 100.0 32 ............................. GCAACGCTACCGACTTCGGTAGCTTCAAGGTC 176008 29 100.0 32 ............................. TCTTTGGACCTCGATACACTCGGCTTATCGGC 175947 29 100.0 33 ............................. GCCGCGAGGGGGCGTTTACTATGCCGACCTGGT 175885 29 100.0 32 ............................. ATCACCCTGAACAACGGGGTACTGAAGGTATA 175824 29 100.0 32 ............................. TCGGTTATCGCCGTGCACCACCATCATGTGAA 175763 29 100.0 32 ............................. CAGGTTGCACGCTGCGGCAATGCCGTTCCGCC 175702 29 100.0 32 ............................. CTGATATGATAAACGTGACGTTCTTCGGCCAT 175641 29 100.0 32 ............................. CGATACTGGCCGGTTGGGATACCGTGGGGTAA 175580 29 100.0 32 ............................. CCTTCCGTGTCAATAAACAGGGCCGGATTGAT 175519 29 100.0 32 ............................. CCTTTGGTCGCTCTGCTATCACTGAGAACGAA 175458 29 100.0 32 ............................. GTCTCCTGCAAGGTAGTTTCGTCCGGTTAGTC 175397 29 100.0 32 ............................. GTGAGCGGCGGGGCTTCCGAGGGTTTCCTGAA 175336 29 100.0 32 ............................. ACTCTGCAACTTTTTCAGAAAATCACAAAATA 175275 29 100.0 32 ............................. CAGGAATGACTCCGCCAGCAGGCATGTAAAAA 175214 29 100.0 32 ............................. GCGTTCAGGTCAGCCACTGACAACGCAATTCC 175153 29 100.0 32 ............................. GTCACTGGACGGTGACGCCAATGGCAGCAAGT 175092 29 100.0 32 ............................. CCTTGAACTGCCACGGGTGGTCCTTGATGTAG 175031 29 100.0 32 ............................. ATCGGGCAAAACATCGTCAGCATCCGTGACAG 174970 29 100.0 32 ............................. AACATCCCGTGGCCGTAGTTGTTACGGTTAAT 174909 29 100.0 32 ............................. CTGGCCGGGTATGGACATTTCTATATAGTCAG 174848 29 100.0 32 ............................. GATAAGAACATGTCAGTACGTGCAAAATTTCA 174787 29 100.0 32 ............................. ATCGGCCATTTGGGCGTTGTCGTCGAAATGGA 174726 29 100.0 32 ............................. CCGATGAAATATTCGTGGTTTCACCATAACGA 174665 29 100.0 32 ............................. CTGTGGCCGAAATGGAAGCCAGTGGCTACATT 174604 29 100.0 32 ............................. CAGACTCACTTGCCACAACGGGATCAGGGGAG 174543 29 100.0 32 ............................. TAGACGGTCCAGCGTGGTAAACAGAGGAAGCA 174482 29 100.0 32 ............................. CTAACCACGGCCCACTGCTTTAGCGCAAAAGC 174421 29 100.0 32 ............................. TCGGTGATATAGACATTTACCAGCGTACAACC 174360 29 100.0 32 ............................. ATTGATGAGGTGCTGAAAGGCATCAATCTCTC 174299 29 100.0 32 ............................. TTGTCGCAGTCATTAACAGGGATAATCAGCAG 174238 29 100.0 32 ............................. AAGCGACTACGGAATTAAACCGGAAAGATTCA 174177 29 100.0 32 ............................. GAGAAGTGGTCTGGCTGGCTGGAGGCCGTCAT 174116 29 100.0 32 ............................. CGTTCTGCGCTGGGCATGTAATATTTTATAGG 174055 29 100.0 32 ............................. GTGGTTATGTTAATGACCCCACCGACAAAGGC 173994 29 96.6 32 ...........A................. TGCGTGCGTACCAGGGTGACACGGTGGATGCG 173933 29 96.6 32 .............T............... ACTTATTAATAGGTCTCAAATATAGTCCTCAC 173872 29 100.0 32 ............................. AGATAAACGTCCGGTAAGGGACACCATGTCAT 173811 29 100.0 32 ............................. CGACGACCTATCCGCGGACCGACTGCGGTTAT 173750 29 96.6 0 ........................T.... | ========== ====== ====== ====== ============================= ================================= ================== 60 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGGCAGCAGGTGAAATACTCCCACCGCAACCAACCCCCGATATGCTGCCTCCGGCAATTCCTGAACCGAAACCTATTGGAGATTGCGGTCATAGAGGGAGTAGTGGATGAGTATGGTTGTCGTTGTGACGGAAAATGTCCCACCGCGATTACGAGGTCGACTTGCGATCTGGCTTCTGGAAATACGGGCTGGTGTTTACGTTGGTGATACTTCAAAACGTATCCGTGAAATGATCTGGCAACAAGTTACTCAACTTGGCGGTTGTGGGAATGTTGTAATGGCCTGGGCAACGAATACCGAATCGGGTTTTGAGTTTCAGACATGGGGAGAAAACCGCCGTATGCCGGTAGATCTAGATGGGCTTCGGTTGGTTTCATTTTTTCCTTTTGAAAATCAATAGAATAATGGTTCTTTAATAATGCAAAGTTGTTACAACCAAGTTGGTAGAATGTTGGTTGATGGAAAGGTTATTGAAAAATAACAATATATTTTTAGT # Right flank : ACTGATATCACCGAACTGGCGCAGAGCCTGAAGTGTTCCCCGCAGCAGAAAAACGCCAGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAAGGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGTAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTATCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //