Array 1 205461-200327 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009517.1 Methanosarcina barkeri 3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 205460 37 100.0 34 ..................................... TTATCATGCATCCAAAGTTTGCACCTGCTGACGT 205389 37 100.0 35 ..................................... CATTTAAGGAAACGTGTATGAAAGCTTCGTGTCGT 205317 37 100.0 34 ..................................... ATTTAATATATTAATAAGTGATTGACCTGTAAAT 205246 37 100.0 36 ..................................... ATGATAGGGGAACGAAAAGGACTTAGTATAATATAT 205173 37 100.0 34 ..................................... AAAAATAATAAATAATATTAGAGTGTAGTAGGTT 205102 37 100.0 36 ..................................... TCACCTGGTATTCCATACTCGGATGCTCTTTTTGAA 205029 37 100.0 36 ..................................... TTGAATATATTGCGTGAATTACCGCATTTCGTATTT 204956 37 100.0 34 ..................................... AATGATATTCACAACAAGGTCACAGCAATTACAT 204885 37 100.0 36 ..................................... CAACGTTATCATTACCTGCAGTTCGAAAGAAGCCTT 204812 37 100.0 38 ..................................... TTGTGGAATGTATAGTCGTTGGAAAGAACCAGGGAGTT 204737 37 100.0 37 ..................................... AAGAAAAAGGAGGAGTATGAAACACAAACCAAAATAT 204663 37 100.0 34 ..................................... CAATGAAAATGGAGCTAACATGGGCGCAATATTT 204592 37 100.0 36 ..................................... GGCTGGACTTCCTCTATGGTTTCTTCTACATTCTCT 204519 37 100.0 37 ..................................... TTTTCTTCAGGACAGCTTATACCCTTGACATACTCTC 204445 37 100.0 36 ..................................... ATTTCCTGATATCAAGTAATAACTTTTGCGGAATTA 204372 37 100.0 36 ..................................... CTTTCACCTAGTTCTTGTTTGATCTCCTCGAATGAT 204299 37 100.0 37 ..................................... TAGTTGCTTTAGGAAGCTTGTGGAGGTTAATCCAACC 204225 37 100.0 37 ..................................... TAATTCCTGTTTGTTTGTATGATTCATTCATTTTTTT 204151 37 100.0 36 ..................................... AGTATGGTTTTTTAGAGTTTCCTGAAAACCGGCTAG 204078 37 100.0 34 ..................................... TGAACAAGAATAATCTATCATTCGATCCTTTGCA 204007 37 100.0 34 ..................................... ACTATAGATGTTCTTTTATCTCTGGTTTTTAATA 203936 37 100.0 35 ..................................... TGCGATTGAACAAGCTCAGAAGGTTCCAGAGCTTG 203864 37 100.0 39 ..................................... CTACGGAACCGTCGATCACTTGGAAGTGGATTTTAAATT 203788 37 100.0 36 ..................................... TGTCTTCATCGCTTGGTTCATCGGGGTAAGCTTCTT 203715 37 100.0 37 ..................................... ATTATTACAGTGTTTTTTAGGATCTATATACATGTAG 203641 37 100.0 35 ..................................... TTAAAATTAAAGCTGGAATGCGAATTACTAAACTT 203569 37 100.0 36 ..................................... GTTGAAAAAATAGTGAAAGATTGCTATGGAAAACCA 203496 37 100.0 37 ..................................... TGGTATAGTTCCATGTATCCACACTCTTCCACACATA 203422 37 100.0 36 ..................................... TTGACGAAAATTACAGTTCTGAAACAGAAACATACG 203349 37 100.0 38 ..................................... AAAAAGATTAGGTGGAATCAAACCACCGTTACTTAACT 203274 37 100.0 35 ..................................... TTGTAAGTCCGTTTCCGCTATCCGATGATGCACTC 203202 37 100.0 34 ..................................... TCAGAATCCTCTCCTTTTTTGGAAGTCTTTTCTC 203131 37 100.0 35 ..................................... ACTATCTGTAAAGCTTGAAAAGACATAGACTCAAA 203059 37 100.0 35 ..................................... TTTTTTTATCCACATACTACGGACAAACTTTATAT 202987 37 100.0 35 ..................................... CTTCAACTTGTTTTTCATAGAGTACCTGGAAACCA 202915 37 100.0 34 ..................................... CAAAGAGCTAGAGAAGAAGGAAAACACCTTGGGA 202844 37 100.0 37 ..................................... ATTTTAAGCGTGTTCCATACCGGAGTTAATTTTTCTA 202770 37 100.0 37 ..................................... ACATCAGACCACCCCCTGAACTTCCTGAGCAAACTTA 202696 37 100.0 34 ..................................... TTAAACAACTCGTCAAAATCTACCATCCTGACTT 202625 37 100.0 35 ..................................... ACTGGAACTCAGATGGTAGCACTCGACCATTACAA 202553 37 100.0 35 ..................................... AATTACGTTTCGGCTCCACTGCTCAAAAAATCACA 202481 37 100.0 35 ..................................... TTCACACTCCATATAGGCTCGCGTGTACCGCAACC 202409 37 100.0 33 ..................................... ATCCCACGGTTGACGTTAACAAATTGGATTATT 202339 37 100.0 36 ..................................... ATTGATCCATCGGTACGCTTCCAGCCTTCTCCTTTT 202266 37 100.0 38 ..................................... TGGAGTTGATGAGAGCGATATGACTTCATTGACTTCGA 202191 37 100.0 35 ..................................... CCAGGATATTATTATCCATGCTCCCCAAACTGAAA 202119 37 100.0 37 ..................................... TTCATTCCTTCTATAAGCACAATTCAAAAACATGGGA 202045 37 100.0 36 ..................................... TCAACTTTGAGCTTTGGCCTGTTGCAGATTGTCCCT 201972 37 100.0 36 ..................................... AGACCTCCAGAGGCTTTTGTACTGCTTCCTGTTCGA 201899 37 100.0 36 ..................................... ATTTCTCTCCTGCGCTGTTTCCCCCTGATCCACGAT 201826 37 100.0 32 ..................................... AAACGATGGTTTAAACAAACGTACTATAAAAA 201757 37 100.0 35 ..................................... TATTTTTCATTGAGTTCTTTGAGTTCCATAGTAGT 201685 37 100.0 35 ..................................... CCCAATTGCCCAAAAACCCCAACGCCGTCAACAAA 201613 37 100.0 35 ..................................... TCGGATGGAATTCCATATGCAGATGCTCTTTTTGA 201541 37 100.0 36 ..................................... AGTGCCTGTGTTGCTGCTGCTGCATCTAGTGGTGAT 201468 37 100.0 37 ..................................... GTTTTAATGCGGCTTCTAATCTTTCCGGTCCTGCCTT 201394 37 100.0 36 ..................................... TCATATACCTCAGCATTCCACCCACCCAGGCAGATC 201321 37 97.3 36 ......T.............................. TGTGTCAGGTTCAGGTTTCCTTCAGTTGCCCAAAAG 201248 37 97.3 36 ......T.............................. TTAGGTGATACTTTCCTAACTCTATGCTTCTCCACA 201175 37 97.3 36 ......T.............................. CGTTCCTCATATTCTTCTTCCGATTCCCACCACAAT 201102 37 94.6 36 ......T........T..................... ACAAAATGTCTAGTTTACGTGCTTCTGCGCTGCTCA 201029 37 100.0 45 ..................................... ACCTGATTGAAAAGACGGCTTCTTCAATATTCTTCATATTACACT 200947 37 100.0 35 ..................................... ATGTAAGTAAGACCACTCACAATAGACCACCATTG 200875 37 100.0 35 ..................................... CCGACTGGATCATATGAAACGGGGCAGGGGACAGT 200803 37 100.0 36 ..................................... TCCATTGAGTAACATTGCTTGGCTGCGCGTATGTCT 200730 37 100.0 39 ..................................... TACATTTCCATTTTTCCAACCAAATCTATTATATCATAT 200654 37 100.0 34 ..................................... TTCAATCCTCCTAAATGTAAAATACGACATAATT 200583 37 100.0 38 ..................................... ATATCTGGGAACAGAGATGTTACAAAGTCCTCCATCAT 200508 37 100.0 35 ..................................... TTCTCATTTGCAAATTGTTCAGGACTTAATCTAGA 200436 37 97.3 36 ...........G......................... ATTACATATATGGGAGTACACGAAAAGGATGTAATT 200363 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 71 37 99.8 36 ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : AATCTTAATGAAATCAGTTTTGAAAACGTTGAGAGAGCATAAAAAATTACATATGAGTAAAGAGGAACTTGCTGATACTCTCAAAAATAGTAATTTAGAGAGCAGTAGTAACTTTGAGACAATATTATTGTCCAGAAATTAATTGTCGCGATATCCTTATGATTTTACCTAAATTTTTACCGTCTATTTTGTTTCTCGGTGCCTTAGTTATAATTTGTGGACTTCAAGCGCGTTTTTAGGAATTGTCTCAATTATTTCCTCAGACTGCAAAGAAGCCGATAACATAATACAGAAAATGCTCGATGTTGTTTAAAAAGACTTATATCCCAAAACATACAGATCTTCTATGAAATATGTAGATAGCCTTACTGGAGTATCTGCATATGAAGAGATTTTTCTTGTATTTATAAAGGGTTTGATAATTTTCCAGCAAGAATTTTAGCTCCAAAAAAGGGCTCATTTCAGACCTTTTCTGGCCAAATAACGGAAATTTTTGCCCT # Right flank : TCCATTTCCCCTTAACATATCGTTTTTTGAAAGAAGAAGTTCTTTACACAGCCTGGAAAAATTTAAACCGAAATACAAAAGGAACTGGTTTTGATTCTCTTACCATCCAACAGGTAGAGGCTTTATGTGGGTTGAAAACTTTATCCGCTCGATAAAAAAGAGCTTAAAAGTGAAAAGTACACGGCTGGGCTTGAGAAAACCGAGCAGACTATTAATAAAAAGATTCAAGATTTTATTTAAATATATATGATGTTTTTTTAATTTACAAGATTAGTCTTAATAAATGAGAAAATGTATATATATTAAAACTAATAAGAATAAAATTAAAAAAGATATTTTTTAAAAATTCATTATACTAATCATGACTACGGAAAATATTAAACTCAAAACTCTTGAAATGACTTTTGAAGGCTCAGAAGAGTTCAAAGGGGACGCAAATCAGATACGTGGTTTCTTTGCGTCAAAATTCAATGAATACGATCAACTCCACAACCACAATA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 3729889-3737068 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009517.1 Methanosarcina barkeri 3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 3729889 37 100.0 37 ..................................... TACAGCCTGTACAATCAGAACTAGAAGCACATTCTGA 3729963 37 100.0 36 ..................................... ATTTTAAGTTATCTGATGGAGCTAAAGAACTGATTA 3730036 37 100.0 36 ..................................... TAATTTAGTTCTAGAAGAAGCAATTAAAAGAGGCAG 3730109 37 100.0 36 ..................................... TTAAGGTATAGGTTTCTGTACCGATTGAGTGGTATT 3730182 37 100.0 34 ..................................... AGTTTTATCGTACCGTTGTCGTCTTTTAATCCGG 3730253 37 100.0 36 ..................................... TTACTTTTATTTAGTTATGTAGCGGCTGCTGCTACG 3730326 37 100.0 35 ..................................... TAATTGCAGCATCTTCAGTTGCAGTTGCCGAATAA 3730398 37 100.0 35 ..................................... TCACCTTCAATCAATTATTAAGTAGTCAATCACTT 3730470 37 100.0 36 ..................................... ATAACAGTTCCATATTTTGAGAATGTTGTGTGCCAG 3730543 37 100.0 36 ..................................... CCTCTTATAGAGTTAAACGGTGGAGAGCATAGGATT 3730616 37 100.0 34 ..................................... TTACTAACGGGCCTATAGAAATTCCATCAGGAAA 3730687 37 100.0 38 ..................................... CTCCGTAGTTGGAGATATAGTCGTATACCGTCATCGTG 3730762 37 100.0 34 ..................................... ATTCCTGGTGGTGATCCCCTCTGCAAATGGTTAT 3730833 37 100.0 36 ..................................... CTATGTGTCTGACAGTAAGTAAATGTGAAAAAAATT 3730906 37 100.0 36 ..................................... TCCCTTCAGAACGTGGTTCTCTCGCAGAGTTTTTGA 3730979 37 100.0 36 ..................................... CGGAGATGTGCATACTTCCCTCTAACGTTTTTAATT 3731052 37 100.0 37 ..................................... TAAAGTATGTGGCTGGCGACGGCACAGGTGATTATGA 3731126 37 100.0 35 ..................................... CCCATCATCTTTCGTACTCGTTCCCTTTCATCTTC 3731198 37 100.0 35 ..................................... AGCGCATTCTCTCCGGCAGTTTGCAGCATCGTAAT 3731270 37 100.0 35 ..................................... TAACAAAGCCATTATAACCGCAACAGTAATGCCAA 3731342 37 100.0 36 ..................................... AAGTACTGTTGAGCCACTACACTTTGAATATGAAAT 3731415 37 100.0 36 ..................................... CATACTTTCTCGGCAAAGTAGTCTATACCAGTCTTT 3731488 37 100.0 35 ..................................... CCAAATATCTTTTTCTTGAATGCAAAAACCGAAAT 3731560 37 100.0 35 ..................................... AAATATATACAAGTTAATTACGAAGTATCTACTAA 3731632 37 100.0 37 ..................................... ATTTTAGCTATCAAGTCTTTTGTTTCAGATTCCTTAC 3731706 37 100.0 34 ..................................... AAATTTTTCACAGGTGTCAAAAAAGACGTAACAA 3731777 37 100.0 36 ..................................... CACAGACTATATAAACCATAGTTATCTACCATCCAT 3731850 37 100.0 36 ..................................... ATCATCCTCTACTTGCTCAGTCTTTCTGCTGGTTTT 3731923 37 100.0 35 ..................................... TTAAAATCGCAAAAGGTGCATCAAGAATCAAAGGC 3731995 37 100.0 34 ..................................... TTAGATTCAATTTCATATCGAAAGTTAGAGAACG 3732066 37 100.0 38 ..................................... TGAATTATTCCCTGAAGAATTCGACTATCTAGAAGGAG 3732141 37 100.0 35 ..................................... CACCAACCGCCTACAAGCTCTTCAGGGAGTACCAT 3732213 37 100.0 35 ..................................... CACAAGCGAAGCAGGCAATTCAACAACTGATTTCA 3732285 37 100.0 34 ..................................... GTGATTGGGATACAACGTTAAAATTTCTTGAAAC 3732356 37 100.0 34 ..................................... AAAGAAAATGAAATCAGAATAAAAGAGTTGAAGC 3732427 37 100.0 38 ..................................... AATTTTGAGCGTTCTTTCATCACTCAACCTCTGAACAT 3732502 37 100.0 37 ..................................... TATAATCATCTGACATTTTGCCTACTCCTTAAAAGAA 3732576 37 100.0 37 ..................................... TCAGGATAGCAGACTTGCAAGCTGTGCAAAGAATCAT 3732650 37 100.0 37 ..................................... ATGAAAATCAGGAAGCCGGGGGTGTATATTCAGATGA 3732724 37 100.0 37 ..................................... TTAAAAAAGCTAACGGTGCATCCAGAATAAAAGGGGT 3732798 37 100.0 37 ..................................... TCCAATTAATAGCCCTCCGGTAAAACGGTTTTTGACC 3732872 37 100.0 36 ..................................... GTTCCGAGTGGTTCGGAGCCAGGGACTTACAGGAGT 3732945 37 100.0 37 ..................................... TTTTGCAGGAAAACAAAAATAATTTCTCTTTTTTATT 3733019 37 100.0 36 ..................................... TTATTATCGTTGTATATATCATATGATTACGGACAC 3733092 37 100.0 36 ..................................... TGGAAGAGACGGGAGCTATACATCAACAATAGGTTA 3733165 37 100.0 36 ..................................... TCAAGTCTTTAGTTTGTGATTCCTTACACTTAATGA 3733238 37 100.0 36 ..................................... ATCACCTTCATATTATACTTATCAATTGTAGATCCA 3733311 37 100.0 36 ..................................... AGGTCTTGGAGATACTTATTTTCTGTTTCTGTAAAT 3733384 37 100.0 36 ..................................... GACAACCGTGGGCTTCTTTAATTATTGAAGGATTAA 3733457 37 100.0 38 ..................................... ATGCTTATTATGTATTGTAAAAGGGCGAGTGCCCAACG 3733532 37 100.0 38 ..................................... CCATATGGAACCCACTTGATATAAAAATGAAAGATCCT 3733607 37 100.0 35 ..................................... TAATGTTTTCACTAATTCTTCCAAATTGACGTCAG 3733679 37 100.0 36 ..................................... TGCGCAGGAACTCAAAAAATACTCGACGGAAACGTT 3733752 37 100.0 36 ..................................... CTGAATGGAAAAATAGACTGGAAAAACTTAGCGAAA 3733825 37 100.0 37 ..................................... AACATATAGTGCTTGACAAGACCAGCAAAGGCAAAGG 3733899 37 100.0 36 ..................................... TGTCTTCAGTCATGATTTATCTTCCTCGTAAGCTTC 3733972 37 100.0 37 ..................................... TCGAGTAGGATCTCCTCTGGATAATGCTCAGATACTC 3734046 37 100.0 35 ..................................... ATCAAATAATAGCAGAATCAACAAAAGAAACACAA 3734118 37 100.0 36 ..................................... CAGTCTATTTTTCATGCTCGTGCGAGAAGTGCTGAC 3734191 37 100.0 36 ..................................... ACATTTTCAAGGAATATAATTTCGGGTCTTTTTTCT 3734264 37 100.0 33 ..................................... CAGCTTCCAATATCTCATCATCTGTTACAACTT 3734334 37 100.0 35 ..................................... TTCGAATTACGGTAACTGACGCCAGCATTCAGGCT 3734406 37 100.0 35 ..................................... TAGTTTTCTATCAATGGCAATATAACAGTCAACTC 3734478 37 100.0 36 ..................................... TCCATCGTTGTGACAACGAAATGATCAAGCTTTGTA 3734551 37 100.0 36 ..................................... GATAAAGAAGGAAACACGTGCATTTTAGCATATGCT 3734624 37 100.0 36 ..................................... ACTCGAATTCAACTGCACGTTCCGCATCGTAAAAAT 3734697 37 100.0 36 ..................................... TTCAATCGAATTTGATTCATCTGATAAGCTCTTTCC 3734770 37 100.0 36 ..................................... TCTGGATCTCTAAAGGTTGTAACGTCCATACCCCCG 3734843 37 100.0 36 ..................................... TTTTTCATAATTCCTTTGAGAATCTGCCCGTACACA 3734916 37 100.0 34 ..................................... TCAAATGTAGTCAATAATACAATTCTTTCGTCTT 3734987 37 100.0 35 ..................................... AAAATAATAATATTACAAACGGTATGGGAATCAGG 3735059 37 100.0 34 ..................................... GTAGAATCAATTAACTTTCAGTTCAGGGGCCTCT 3735130 37 100.0 37 ..................................... TAGTATAAATACATACCATATGCAGTATAAAATATAA 3735204 37 100.0 36 ..................................... TGGCAAGCTCTACCAGCAACAAAAATAATTAAAAAA 3735277 37 100.0 37 ..................................... GCGACTTAAGAAGCTCTTGCCCAATCTGGAAATTAAG 3735351 37 100.0 37 ..................................... TTCGGTGAATATCCCAATATTGGGATTAATGCTTATG 3735425 37 100.0 37 ..................................... TTCGGTGAATATCCCAATATTGGGATTAATGCTTATG 3735499 37 100.0 39 ..................................... TCAGTAAAATATATATCATGAATCTGCCCTGCCTGTAGT 3735575 37 100.0 37 ..................................... AAATAGTAACATAAGAGGTTTGAAAACAATGAGCAAA 3735649 37 100.0 38 ..................................... AGGAATCCACACCTTACAAACTTCCTCCTCGATACTGT 3735724 37 100.0 37 ..................................... CAGAGGAATTACTACAGAAATGGGGGTGGAACCAATG 3735798 37 100.0 35 ..................................... CGGCAGGATCTTCAGCTATCATCTTAATATCTGCC 3735870 37 100.0 36 ..................................... TCTCCGTCTTCAACTAGATACAGGATATTTGCTTTA 3735943 37 100.0 36 ..................................... CAGGTTATGCCGTCGTCTATAGCGGTGCAATGATCT 3736016 37 100.0 35 ..................................... CATTTACTTTCTAATTTAGCCTTAAATTTTCCAAA 3736088 37 100.0 33 ..................................... TGAATCCTCTGAAAAATACAAAGTAACAGTCTT 3736158 37 100.0 37 ..................................... CTCCTTACTTCAATTGTTTTCAATCCTTCAACAATAA 3736232 37 100.0 38 ..................................... TGAAAATCATCCCAAGTTCTAAGGTATGACTTTCCATT 3736307 37 100.0 36 ..................................... ACATCCCTGCTGATCCTCTACGTACTTCAGCCAGTC 3736380 37 100.0 35 ..................................... TTATAAAGAGTTATTATCTAAAGGGCAAATCAATG 3736452 37 100.0 35 ..................................... CTATGTATCAAACAAACCTACTAGACGGTGATGTA 3736524 37 100.0 37 ..................................... GTAATTCAGCTAGCATTTGTGCTAATCAACCTAACCG 3736598 37 100.0 34 ..................................... TCTTATAGTGCTGGCTCTAGGTGTCTTATGTCTG 3736669 37 100.0 35 ..................................... TATGGTCAAATAATAGAGTAACCGGTTTTGTTAGT 3736741 37 100.0 36 ..................................... GGGGTTTTCGTGATAACTTGCCCGGAGAAAAGCATA 3736814 37 100.0 35 ..................................... AAATTAAAGCTGTTCCAGTCATTGTATACCACCAT 3736886 37 100.0 38 ..................................... TTCGATGCTGGGCTGATGTCAGCCAGGGTTAACCCCAT 3736961 37 100.0 34 ..................................... TTATTTTCTTTTCCTTCTTCTATAGAAATTATGT 3737032 37 97.3 0 ..................A.................. | ========== ====== ====== ====== ===================================== ======================================= ================== 99 37 100.0 36 ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC # Left flank : GGAGAGCGACGTCTTCATTGCTTCAAAACAATACCATATAAAAGGAATAGTTGATGAGGTACTTTTTCTTGAAGACGGTACTGCTGCTCCTCTTGAGTACAAATTCGCTGAGTATAAAGACAAGATTTTTAAAACCTATAAGTTTCAACTGGTTTTGCAGGCTCTTTTGATTAGGGAAAATTACAGTATTAAAGTAAACCGTGCTTACATTTGTTTTACCCGCAGTAACAGCCTTGTCAAAGAAATGGAAATTACTACTTCTGATTTCAAAAAGGCTGAGAAAATTATTGAGGAAATAATCGATATTGTTCAAAAAGGCTTATATCCCAAAACTACTAAATCTTCTAGAAAATGCGTAGATTGCTGTTACCGAAATATCTGCGTATGAGAAATTTTTCTTGTATTTATAAAGGGTTTGATAATTTTCCAGCAAGAATTTTCGCCCCAAAAAAGGGCTTATTTCAGAGCTTTTCTGGGCAAATAGCGGAAATTTTTGCCCT # Right flank : CAAATGAACGCATACTTACAAAGAATACTAACAAACCATTTTAGTAAATTCTATTAGAGTCGATCCTATGTTGAGTTAGATATGTTAATATTCTGTTATAACATATTATAATATATGTCTACTATAGCCATTGACCCAGATGTAAAGGAATCACTTAAAGAATTTAAGATTACAGAAAACGAGTCTTATAATTCCATTATCAAACGGCTCATTGTTAAAGTTAAAGAAACTGCAGAGTATAAACCAATGTTCCCAAAAGAAGAGAACACCGAACGAAGAGAATCACATGTCAAAGATTTTGATGCATGGTTGGATAGGAAACTCATAGAAGACAAAGAGATCTTAGACGCACTCGGAAGAAAGTGATATGTTGATTAGCTTAATTGATGTCTTAAAAATTCATCAACGAGTGATTGACTATGACAAAGAGGAGAATCCTGACGATTATACGCCTGCAATTAGATCTCTTGCTACATTAGAGTTAATGTTTGAATATATGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //