Array 1 1189-30 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ440400.1 Apilactobacillus apinorum strain Fhon13 Fhon13_scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1188 36 100.0 30 .................................... TAAGCATTGTTTGATGTTTACCAATTGCAG 1122 36 100.0 30 .................................... AATCTAGTTTGTAATTCTTGCTTGTTCATA 1056 36 100.0 30 .................................... AAGCGTTTGTTGTTTACGATACTACTGTAG 990 36 100.0 30 .................................... ATTCTTTGATGTTACGAATCCTAATAAAGC 924 36 100.0 31 .................................... GAGAACTAAACTCAGTTCCTCAAACTGCTAG 857 36 100.0 30 .................................... ACTATCCACAGGTTCACCTGTCAAAGTATC 791 36 100.0 30 .................................... CTATCGTATTAGTGGTAGACTAGATAGGGT 725 36 100.0 30 .................................... CATCATCTGAAACGACTTTCATTTGGATTT 659 36 100.0 30 .................................... ACATTTAGAAATCAAGACGTCTAAATGTCT 593 36 100.0 30 .................................... CGATCCAGACAAAGTTGACTGGTCAATTGT 527 36 100.0 30 .................................... ACCGAACCAATCAATCACGGTTAGCGACAT 461 36 100.0 30 .................................... GTATGGCCAATTCGCAAGTATTAAAACTGA 395 36 100.0 30 .................................... CAGACATATGTGGAAAGATACAGTTGACCA 329 36 100.0 30 .................................... GCATACTTTATCCAAGTTCCTTTAGATATG 263 36 100.0 30 .................................... AGATGCTGATATGCAAAGGATGCAACAAAT 197 36 100.0 30 .................................... GATTTACCGTTTCAATAAATGGTGGAGTAT 131 36 100.0 30 .................................... AAAGAAATTCTTCGACGATGAAGCTGATGG 65 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 100.0 30 GTTTTAGAAGTATGTTGAATCAATGAGGTTTAGTAC # Left flank : TTTTTATTATCTTAAAACAAAAAACACGC # Right flank : CTCACGACGCCAATTACTATCATTGAACAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTTGAATCAATGAGGTTTAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 105152-105980 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ440395.1 Apilactobacillus apinorum strain Fhon13 Fhon13_scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 105152 36 100.0 30 .................................... ATGGATATCCACTGTTTTCTATGTATTGCT 105218 36 100.0 30 .................................... ATTCGTATAAGTAATGATGCAATCTTTTTA 105284 36 100.0 30 .................................... AATTCAAATTAATACCAGTTATGATCGTCC 105350 36 100.0 30 .................................... ACATTCTTAAAAGAAAACTATATTCAACAT 105416 36 100.0 30 .................................... ATCAATAAAGATAACATCATATTTGCTTTT 105482 36 100.0 30 .................................... CCTAACCAATCAATCAACGTCGGCGAGATG 105548 36 100.0 30 .................................... TCAACTTGGTTTCAGCTGGCAGAATGCTCT 105614 36 100.0 30 .................................... TTAAACCTTTAGAGTCAGTTGTTATTGACA 105680 36 100.0 30 .................................... GTAGTAATCCTGATCATTAAAATCGGACAT 105746 36 100.0 30 .................................... CCATCTTTGCTCGTTCTTCACCTTTTTTAA 105812 36 100.0 30 .................................... GGTACAAATTGATGGACTTCAACTAACCCG 105878 36 100.0 31 .................................... AATTGTTTAATTATGCTTTTGGATCCTTTGA 105945 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== =============================== ================== 13 36 99.8 30 GTTTTAGAAGTATGTTGAATCAATGAGGTTTAGTAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA # Right flank : GATAATTTGAATAGGTTGTGTGTTTATGAAAATATGTTATTGGAATTGTAATGGTGCTTTTAGAAAAAAATATAAACAGATTATTAAAGAAGAAGCAGATTTATATATCATATCCGAGGTAGAAGATATTGATAAAATTGATTTTCTTGATGACGTAAATCATAAACTATATCGTAGAATTGATGGGGACCAAAAAGGGATATTGTTTTTTACATTTTTGGATGAAGAGATTATTCCGATTGAAAATAATAACTATGGAATTCGTTATATCATTCCGGTGATGTTTTTAAGCCATAAAATATATGGAGTTTGGATGAAAGGTGGATATATTGAAGATTTGTATACATATTGTGCTGTAAACATTAAGCACCTTTCCAATGCCATTATTATGGGAGATTTTAATAGTAATGTGATATGGGATAAGAAACATGGTGATCGAAATCATACACGATTTGACTTTATGATGAAACAAATTGGTATACATAGTGCCTATCATCAAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTTGAATCAATGAGGTTTAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 30-857 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ440403.1 Apilactobacillus apinorum strain Fhon13 Fhon13_scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 30 36 100.0 30 .................................... TATCTAAATAAACTAATCGTGATGGATTGT 96 36 100.0 30 .................................... TGAGTGATTTTTTCAGTATCTGAAACCACC 162 36 100.0 30 .................................... GCAATGTGATTAAAGACCAAATGAACAATG 228 36 100.0 30 .................................... ACATGTTCGAGCCGATATCTTTGATAAAGT 294 36 100.0 30 .................................... CTAATTTATCGTTTAGTAGTGGATTTGTTT 360 36 100.0 30 .................................... CTAGATGAGGTTCCCATTTACCAATTCGGT 426 36 100.0 30 .................................... TCTTGAATCCACTTTTCGGCTCTCTTGACT 492 36 100.0 30 .................................... CTTCAGCAGCGACTTTAAATTCTTGTTTAA 558 36 100.0 30 .................................... TTGGATGAGCGATTGCTGAACCAATCTTCT 624 36 100.0 30 .................................... GGCAAGGCATTAAGAATAAAGTATCCGACG 690 36 100.0 30 .................................... ACGCACAAGGCCAAGCGATTCGTGATTCTT 756 36 100.0 30 .................................... ACAACAATGGTCGGTATTACGCTTTTTTTA 822 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GTACTAAACCTCATTGATTCAACATACTTCTAAAAC # Left flank : ATAATAGCGTCCGTTTCGGGCTGTGTATGG # Right flank : | # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTAAACCTCATTGATTCAACATACTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [25.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //