Array 1 42534-42965 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000008.1 Clostridium botulinum strain 69-A-KM145-1 8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================================================================================================== ================== 42534 26 100.0 40 .......................... GCGAATATGAAATTATTGTGAAGTAGAGAAGGGGGAATGC 42600 26 100.0 39 .......................... GCTTAAAAAAAGTATAATTTTTAAACTTCATAAAACTGC 42665 26 100.0 120 .......................... GCAGGGAACCCAAATCTGTGATTTGGTGTGAGTCGCTTACTCGTTCGAGGGAACGAGAAGGAGTTTCATTAAATAATTAGATATTTAATGTTTTAAGCTTATGTATGGTATGAAAACTAC 42811 26 88.5 38 ....T........A.T.......... ATTTTATTTTCTTTATATTCGCATATTAAATATGCTAT 42875 26 96.2 39 ......A................... ATGTATCTTCTGGGAATAAATTAGGCATTTACAACCAAT 42940 26 96.2 0 .............A............ | ========== ====== ====== ====== ========================== ======================================================================================================================== ================== 6 26 96.8 55 TGAACATTAACATGAGATGTATTTAA # Left flank : TGTTTCATAAAGAAATAGATTATGAAAATATTAAAGAGGAAGAATTAGATGAAATTTTAGAGGGGATAAAAAAAGAATTTCATGATCTAATAATATCAGTAAAGGAAGAAAATAAAAACATAATATTAGTTACTAATGAAGTAGGTTATAGTATTGTTCCAGCCTATAAATTAGGCAGAATATTTAGAGATTTTCAAGGTATTATAAATAAATTTATAGCTTCTTTGAGTGATGAAGTTTATTTAGTAACCTGTGGAATACCTTTAAAAATAAAATAAAATTAATTTTAGTAACTAATTAATCTAATTACAAGTAAAAGAATTTTCCAACCACATTTAATTTTAAAATCTATTCTAGGCATTGAAATATAAGACTTAAGATAAGTTTTATCTCTACCATTATAAAAAATGGCAAACGGTTGGAAAAATTTCTTTAAAACCTTGTAAAATTAAAGGCTGTATGCTATTCTTAGAATTAAGAAATGGCTATTTTTCTATGGC # Right flank : AATCAGCATGTAGAATAAGGTGATTCAAAATAAATTAAATCTATTTTGAATCACCTTATTTTTGTATAATAAATACTAGCTATTTTAGATAATATTTAAAATAGCATATAATTATTATTTTATATTGTCACAATAAACATTAATAGCTTCTCTTAAAAATTTAGAAAGACCAGTTTTATATTTATCTATATTAGCAGTAAATCTTTCATCATTAACATAAAGTTCTCCAAGCCCCCTAAATATTTCAGGAGTACAATCATAAAAGTTTTTTGAAATGTGCTCTCTAAATTGGTGAACAGATTCTTGGACTTCCTTATCATCTGGATTTTTGTCCATAAGATTTGCTAGTTTTTTATAAATTTCATCCCAACCTTTCATTATATTACTCCAGTCTTCCTTTGTATATTTGGATGTTTTTTTATTACTTTCCTTATAGGCAGAGGTATTACCGTATTTTTCTTTTATCTCTTCTGAATATTTTCTTTGATGCTCCTCTATTT # Questionable array : NO Score: 4.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-1.79, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAACATTAACATGAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.92%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 217804-218374 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000001.1 Clostridium botulinum strain 69-A-KM145-1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================== ================== 217804 30 100.0 37 .............................. GAACAATAATAACGCAAATTACTAGAAACACTTCTAA 217871 30 100.0 36 .............................. TTGCTATGCCGCAAGAGGTAGAGAAGGAAAAGCACC 217937 30 100.0 35 .............................. TGGGAAAATAATCTCAGAGTTGCTTGTCCTGGTAG 218002 30 100.0 36 .............................. CGATTCATATTTTCTCTTTCTATGTTTTCGGAACAA 218068 30 100.0 36 .............................. AAAAATAAATAATAAGATATATCAGAGTCGAATTTT 218134 30 100.0 36 .............................. TACTATAACATTTAAAAGAGGAATAATTCTTAAAAT 218200 30 100.0 115 .............................. AGGGAACCCAAATCTGTGATTTGGTGTGAGTCGCTTACTCATTCGAGGAAACGAGAAGGAGTTTCATTAAATAATTAGATATTTAGTATTTTAAGCTTATGTATGGCTTGTAAAC 218345 30 90.0 0 A.......T......A.............. | ========== ====== ====== ====== ============================== =================================================================================================================== ================== 8 30 98.8 47 GTTGAACAATAACATGAGATGTATTTAAGC # Left flank : GCATGACATCAATTTTATCATAGGCATAGGTTAATCCAATAGTTAAAAAAAGTTCTGCGGTTATATCAGAATGAGTAAGGGTGTAGCGTCTTCCTAGAATAGGTTCTGTGCCAGTTACTCCATCTCTAAATTCTACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCTGTACAATATTTCTCATAGGACTATTATATGATTAGGTTAAGGAAGTTGTCATTTGGGTATCTATAAAATCTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTGAAATAAATAAAAGAAAAGAACAAAAACTTTTTCCAACCGACTCTAGTTCCAAAATCTATCTTAACCTTTGATATATAAGAGGTTAGGGGGTGCTTTTTATGTAAATTTCAAATTATTTAAAACGGTTGGAAAATTTTGTTTAGAACCTTGTAAAATCAATGGTTCTATGATATTCTTCAAATTAAGGAATGGCTATTTTACTATG # Right flank : CAGAGAATTCAAATCTGTGATTTGATGTGAATTGCTTACTCCTTGGAGAGTAGGAGAAGGAGTTTCATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGTTTTTTATTTTGTATTTATAAAAAACAAAATCACTTGGAAAACTTTCTCTAAAATATTGTAAAATCAGTGCTTATATGATATTCTTGAAATTAAGGAATGGCTATTTTGCTATGGTTGAACATTAACATAGGATGTATTTAAATTCCAAATATGACATTTCATATCCTCCCTTGTATTAGTTGAACATTAACATAGGATGTATTTAAATAGTAAAAAGAGATTAAAAAGGAGAGTGTGAAATATGGTTGAACATTAACATAGGATGTATTTAAATCTAGAATACTTTTTAAATATATCAGCATAACGTATTATTGAACAATAACATGAGATGTATTTAAATCTTTTTTTAACCTTGCCACC # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-1.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 218627-218911 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000001.1 Clostridium botulinum strain 69-A-KM145-1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 218627 30 100.0 35 .............................. TCCAAATATGACATTTCATATCCTCCCTTGTATTA 218692 30 100.0 36 .............................. AGTAAAAAGAGATTAAAAAGGAGAGTGTGAAATATG 218758 30 100.0 36 .............................. CTAGAATACTTTTTAAATATATCAGCATAACGTATT 218824 30 86.7 28 A.......A......GA............. CTTTTTTTAACCTTGCCACCCATACTTG 218882 30 86.7 0 ........A.....AG.....C........ | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 94.7 34 GTTGAACATTAACATAGGATGTATTTAAAT # Left flank : GAATTTTGTTGAACAATAACATGAGATGTATTTAAGCTACTATAACATTTAAAAGAGGAATAATTCTTAAAATGTTGAACAATAACATGAGATGTATTTAAGCAGGGAACCCAAATCTGTGATTTGGTGTGAGTCGCTTACTCATTCGAGGAAACGAGAAGGAGTTTCATTAAATAATTAGATATTTAGTATTTTAAGCTTATGTATGGCTTGTAAACATTGAACATTAACATAAGATGTATTTAAGCAGAGAATTCAAATCTGTGATTTGATGTGAATTGCTTACTCCTTGGAGAGTAGGAGAAGGAGTTTCATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGTTTTTTATTTTGTATTTATAAAAAACAAAATCACTTGGAAAACTTTCTCTAAAATATTGTAAAATCAGTGCTTATATGATATTCTTGAAATTAAGGAATGGCTATTTTGCTATG # Right flank : TTTGTACACAATCTGAATTTATGGTGACATAATTACTGAAATTAAAAATACGAATAATGTTCTTTGAAAATTGAATAATACGGTATTAAAAAAATGGAAATGCTTACATCTTAATATCAATAGCCAGTATAACAATATAGAAAATATGTTGTAGTTTTATATAATAGTTAAGTCCAAATAGTAAATTATGAAGTTAAATTAAATATAATTCTTAAAAATTATTTTTAGCAAAATAGGTCAAGTAAAAATCCATAAGAATATGTTATCCTTTATTCAAGAGGTGAGAACATGGGAAATTGGGAAAAGATAAATGCGGTATATCGTATGCAAATTTATATTGAGAATCATATAGCCGAATCAATAACTCCTTGTATGCTTGCAAATGCAGCAGGATATTCACTATGGCACTCTACAAGGGTTTTCAAGGAATTAACAGGTAAAACACCATTTGAATACATTCGAGCACTTCGTTTGTCTAGGGCTGCTGTTAAATTGAGAGA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 225155-225449 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000001.1 Clostridium botulinum strain 69-A-KM145-1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 225155 29 100.0 37 ............................. TATTTTGAATCTATCTTATCCCAATTGTTATTTAAAA 225221 29 100.0 37 ............................. TTCATTAGAACTAACTATTACAAATTGCCCTTTTTCA 225287 29 100.0 38 ............................. AATTTAAATAAAATATATCCAAAAAATCAGAAATCCGG 225354 29 96.6 38 ..............G.............. TAAGTAACTGCAAATTGAGGTACACCATCATTATTTCG 225421 29 82.8 0 .......A......GA...........GC | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 95.9 38 TTGAACATTAACATAGGATGTATTTAAAT # Left flank : GACCTGGGATAATCAAGGAAACGTTGAGGATGTTGCAACAGGAAGTGCAGCTGGACCATTAGGTGCATATTTATATAAGCATAATATTTTTAATGTAGGTCATGAGATTATAATAAATCAAGGAAGATTTGTCGGCAGACCTAGTAAAATTAAGGTTTCTATGAGCATTTCTGAAAAAGAAATATTAGTGTCTGGAGAGGTAGCTATTTTGGCAAAGGGAACTATTTTACTATAATAATAAACGTAAAAAATCGCATTATTCAAGAAATTGAATTTGCGATTTTTTATTGCGCAATCCAAATATATTGTAAAGTTAACTGAATTTTTCCAGCCAAAATAAATTTTAAAACCTATTTAGAGCGTTGACACATAAGGCTTATGGTAAGTTTTTATTTTATATTTGTAAAAAGCAAAACTACTTGGAAAAATTTTTATAAAACCTTGTAAAATCAATAGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTGTGA # Right flank : CAGGGAACGCAAATCTATGATTTGATGTGAATTGCTTACTCCTTGGAGAGTAGGGGAAGGAGTTTCATTAAGTAATTATATACTTAGTATTTTAATACTAGATATAATACATAAGATTAAATATTAATATAGTATGTAATACATATAATGAAAATTATTAAAAGTCTTAGAAAAATCTAAGACTTTTATTTTATGCAAAATTTTAGAATTAAATATAACACTAGATTTAAAAATATTTAATGGAAGCAATAATATTTTCAAATTTAGTTTTTATAAAAATTAAGTAAAATAATTGGTTATATAACTAAAGAACTGTATGGTATAATATAGATAAAATTGTATAAAGAGGTGTATAAATGGAATTTTGGGAAGCAATTGTAACAGTCATGTTAAAAAAAGACATATATTTTGAAGATTGTGGATATATAATAGGGAAAAATATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAAGAAGTACATCCAAAGAAACAGTAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 4 239600-238559 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000001.1 Clostridium botulinum strain 69-A-KM145-1 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================================================================================================================================= ================== 239599 29 89.7 37 C...G...............A........ AAAATTGTAAATAAAACAGGTGGAAGTCATGGAGTAA 239533 29 100.0 35 ............................. CTAAAATGTTTCCAGTTTCCTGATTAATCATATAA 239469 29 100.0 37 ............................. TACAGGTAAGAATCCTTATTATTGTAAACTAATTTAA 239403 29 100.0 36 ............................. TATTTACAGCTTTCATAAGACCTAAGCATCCTTCTA 239338 29 100.0 37 ............................. GCCATATGGATGTTGTTTAGGTCTATTATGATGCCCA 239272 29 100.0 209 ............................. CGTAGTAAAATAGCCATTCCTTATTTTTAAGAATATCATATACACATTGATTTTACAAGGTTTTGTAGAAGTTTTTCCAAGTGATTTTACTTTTTTAAAAATTCACAATAAAAACCTAGCCCAACCATTATATTTCAATGGCTATAATAGGTTTATAAGCTTATTATGCCTGGAAAAATTAACTTAATGAAACTAGTATTACTTATAAA 239034 29 93.1 37 ............C.......A........ TTATGCAGCTGATAATCATAGACAAATAACAACAGAG 238968 29 96.6 221 ....................A........ ACATAGTAAAATAGCCATTGATTTTACAAGGTTTTAAAAAAATCTTTCCAAGCGATTCTTATTTTTTATAAATACATAATAAAAACCTACTCTAATCCTTATATATCAATGCTTAGAATAGTTTTAAAATTCAATTCACTTGGGAAAATTTAATTAGATATAAATATACTATGCTCGAAGAAGTAAGCGATTCATGCCAAATCAAAGATTCGGGTTCCCTG 238718 29 82.8 36 C............C......A.A....C. TGAAGGCGGTGTAGCAAAACAAGTACAATAGCTGAA 238653 29 89.7 37 ...T....T..............C..... TTAAAAATAGTATTAGTCTTACCGCACCAGAATTAAA 238587 29 96.6 0 .............C............... | ========== ====== ====== ====== ============================= ============================================================================================================================================================================================================================= ================== 11 29 95.3 72 TTTAAATACATCTTATGTTATTGTTCAAC # Left flank : ATTTCATGCTAATGTTAAACGAAGAATTTGAAAATATGCTAGAAGTTTTGAAATTATTTAAATACACCTCATGTTAATGTTCAACGAAATACCTTTTTCAGTCATTCTTTCTTTAAATTCATCATTTAAATACATCTCATGTTACTGTTCAACAGAACTTACAAATACTCAAAAGGCTATATTTACTCCATTTAAATACATCTCATGTTACTGTTCAACCATAGTAAAATGGCCATTCCTTGTTTTTAAGAATATCATATAGCCATTGATTTTACAAGGTTTTAAAGAAATTTTCCCAACCGATTCCTATTTTTTATAAAGGCATAACAAAAACCTATCCTAATGCTTATATATAAATGACTAGAATAGACTTTGAATTTAAATTCACTTGGGAAAATTTAATTAGATATAAAATATATACTATGCTCATTAATGAAACTCCTTCTCGTTGCCTCTAAGGAGTAAGCGACTCACTGTAAATCAGAGCTTTAGCTTCTCTG # Right flank : CATAGTAAAATAGCCATTCCTTATTTCTAAGGATATCATACACCTATTGATTTTACAAGGTCTAAAAGAAATCCTCTCAACCGATTCTTATTTTTTATAAAGGCATAATAAAAACATATTCTGAGCCTTATATATCAATGCTTAGAATAAGCTTTAAATGTGAATTCGCTTAGGAAAATTTAACCTAACAAACACTCATATACTTATAGAATTTCAGTAAAGAGCAAAAACTAGATATGGATATTAACCCATTCTAGTTTTTTGCAAATGTATATTTAAATATTTTTAGCTACTTCATATGCACTCCAAATAGCATACATAATATTTTGAACTTTATTAGCATCTCCAATAAGTCTTGCATTTGGAATATCAAATCTAACCTGGTTATACAGGTCATTTTCAGATAAATATCCGATAGCTACAACAGCACTATCAGCATTAATAATTGATTCTTCTCCATTTGTATTTAAAACAAAACCTTCATCTGTTTTCTTGCTGAT # Questionable array : NO Score: 2.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-3, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATACATCTTATGTTATTGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 5 239881-240254 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000001.1 Clostridium botulinum strain 69-A-KM145-1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================================================================== ================== 239881 29 100.0 37 ............................. TGGAGTAAATATAGCCTTTTGAGTATTTGTAAGTTCT 239947 29 100.0 39 ............................. TGATGAATTTAAAGAAAGAATGACTGAAAAAGGTATTTC 240015 29 93.1 36 ........T.........G.......... TAATTTCAAAACTTCTAGCATATTTTCAAATTCTTC 240080 29 86.2 116 ...T....T..G.....A........... AGGGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTCCTTCGGGGATAGGAGAAGGAGTTTAATTAAATAATTAGATATTTAGTATTTTAAGCTTATGTATGGTATGAAAACC G [240108] 240226 29 82.8 0 .C......T..........C..G.....G | ========== ====== ====== ====== ============================= ==================================================================================================================== ================== 5 29 92.4 57 GTTGAACAGTAACATGAGATGTATTTAAA # Left flank : CAATAACATAAGATGTATTTAAATTAAATTAGTTTACAATAATAAGGATTCTTACCTGTAGTTGAACAATAACATAAGATGTATTTAAATTATATGATTAATCAGGAAACTGGAAACATTTTAGGTTGAACAATAACATAAGATGTATTTAAATTACTCCATGACTTCCACCTGTTTTATTTACAATTTTGTTGAACATTAACATAAGATGTATCTAAGCAGAGAAGCTAAAGCTCTGATTTACAGTGAGTCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATTAATGAGCATAGTATATATTTTATATCTAATTAAATTTTCCCAAGTGAATTTAAATTCAAAGTCTATTCTAGTCATTTATATATAAGCATTAGGATAGGTTTTTGTTATGCCTTTATAAAAAATAGGAATCGGTTGGGAAAATTTCTTTAAAACCTTGTAAAATCAATGGCTATATGATATTCTTAAAAACAAGGAATGGCCATTTTACTATG # Right flank : GCAGGAATTCCAAATCTGTGATTTGGCGTAAATCGCTTACTCCTTGGATTAAGGTGTAGGATTTTTATTGACTAAAATATTTTTAAAATTTAGTTTTAATTTTGGTTGTGCTTTAGAGTGGTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATGTCTTCTTTTAATGGGGTTTATATAAATTGTAAAATACTAACTATTTAAAAATTTTTTCAATGAACCATTATCTTTAAATAAGTCTTTTAAGTTACCGTATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTGTCTACATTAAATTTAATAATTTCAGCGTTTGGTATAAGAGATAATAATACCACAGCATTTTTTTCTAAAAGTTTTTCAACTTTGTTGTCCTTCCAAAATTTATTATAATTTTCTTCCCCTAAATTTTCATTTGCTTTATAGTTAACAGTTATTTCATATGGCTCTTTACTAGTTCGTAGACTAAATCCAGC # Questionable array : NO Score: 3.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:-2.26, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATGAGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 6 246838-247732 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000001.1 Clostridium botulinum strain 69-A-KM145-1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================================================================== ================== 246838 30 100.0 36 .............................. ATGATTGGTGGGAGTAATTTATTAATTAAGTTTCCA 246904 30 100.0 35 .............................. GAAGTAACTGGCAAATCCTTAAAATGGTGGGTTGA 246969 30 100.0 37 .............................. GTATTATCCTCCACTACACTGGTAGGATTACCATATA 247036 30 100.0 36 .............................. AAAGATACTGTAGTTTCTCTTATGTCATTGCCCATA 247102 30 100.0 35 .............................. TATTGTAATAGCTATAGGTGCAGCATTGTTAAATA 247167 30 100.0 37 .............................. AAGTTTTAACTGATATACCGTATTCATTTGCTACCTC 247234 30 100.0 35 .............................. ATAATTCTTTCCTTTTATCAAAATTTACACCATTC 247299 30 100.0 36 .............................. TATAATGCTGATCTTGAAGTAACATTTACTTGTCTG 247365 30 100.0 37 .............................. CCTTTAGTATTTGTATAATACTGTACTGCTCCATTAG 247432 30 90.0 36 A..............AG............. TTTTTAGACTTAGCTTGTAATTCCTCATCTATCTCG 247498 30 83.3 34 A..A....A......AG............. GCATTACCTGGTCTTTTGGATTTGGCTAGTGCTG 247562 30 90.0 111 ........A..............C....G. AGAGAAATCAACTCTATAATGTGTTATTAATCATGTACTCTTTATAGATTATAGAAAAAATGTCTATAAATAATTTAATATATTGATGAATTATGATTAATATGGTAGACT 247703 30 73.3 0 TA.ATTT.A......A.............. | ========== ====== ====== ====== ============================== =============================================================================================================== ================== 13 30 95.1 42 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : CAAAAGCCTATATTCATGTATTTACTTTGTTTTTTGTAGTAAATATTTATGATATGATTGTTTTAGATATATGTATTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGAAGTCCATGGTATCATATAAAAGGAGCTGGTATTGGAACTATAACAGGCGCTGTAGTAGCATTATTATCTGGAGGAATGGTTCATTTCATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCCCAGATTTGGTGTGAGTCGCTTACTACTTCGAGAATTGGAGAAGTAGTTTCATAAATTAAAGTTTCCAACCACAATAAATTTAAAAACCTATTCTAGCTATTGATATATAAGGCTTAGGATAGGTTTTTATTTTGTATTTATAAAAAAACAAAATCACTTGGAAAACTTTTTTTCAAACCTTGTAAAATCAATGGTTGTATGCTATCCTTTAAATTAAGAAATGGTCATTTTACTATG # Right flank : TATTCTTGTATTTATTATTTAATTTTAACCATAACATAAGATGTTTAAGGGCTATGTAAAAATTATTTTTTATGTGGCTTTTTTTATTATGATTTTATAAATTATTTTTATATATTAAAAAACGTTAAATATATTTATATAATTAAATTTTTTACATTAAATCCGTGTAAAACATTGACAGAAAAAACTATAAATGGTATTGTATGATTATACAAAGAATTTTTATGAAATATGTTTTCTAGTTATGTTAAAATTTCAATTCTAGTATTTATTATTTAAAAAAGGTGTAAATATGAGAGGAATAATAACAAAATTTATTCAAGACAATAAGATCGTTGTACTTATAGCAGCATTATTAATTTTTTCTATTTTTAACAAGAAGAAAAATATAACTTTATTAAAGGGAGATAAAAAATCATTTTTCTATGTCCAATAACAGTGAAAACATATAAAAGCAGCAACCTTTTATATGTTTTAAAAAATAAGATATATGAGGTGAA # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.56, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 7 257295-257864 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDL010000001.1 Clostridium botulinum strain 69-A-KM145-1 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================== ================== 257295 30 100.0 36 .............................. TAATCATCTGTATGCATATTCCCGCTGCCTAACCCA 257361 30 100.0 36 .............................. AAATATACTATGTGCGCATGAATTAGGCCATGTGCT 257427 30 100.0 36 .............................. CCCTCTAAGTAACTAACTCCTCTATAATATAAGTCT 257493 30 100.0 36 .............................. CCGTATGCGAAATTATGCAATACCGTATACGATAAT 257559 30 100.0 36 .............................. AGAAATGGTTAATGCTGCCCTAAAGCTTAAGAATAG 257625 30 93.3 115 ............................GC AGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCATTCGAGGTGAGGAGAATAAGTTTCATAAAACAATCAAAGCTTTATTATTTTAAAATTAAGTATGCTTTTAAACT 257770 30 83.3 35 T......A.......GA.........G... TGTAAGAATAGAATAACAACAGTAGATTTAGAAGT 257835 30 76.7 0 A......AAC.....GA...........T. | ========== ====== ====== ====== ============================== =================================================================================================================== ================== 8 30 94.2 47 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AAAGGAGAAGATGTAAATGGGGAAAGGATTTAATTATAATTATGCCTTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAACAGAGTATTTAAAGTTTGCAAAAAATATTTATCTCATTTCCAAAAATCTGTATTTAGAGGAGAAATAACACCAGCAAACTTAATATTATTGAAAAGGGATTTAAATAGAGAAATAGATGAATGTGAAGATTTTGTATGTATTATAAAGTTAATGAATAACAATGTTTATGGAGAAGAAATATTAGGAAATAAAGGAATAACAACAGGGGAAGATCTAATATTATAGAAAAAATAAAATTGATTTTTCCAGCCAGTCTAAATTTTAAAATCTATCTTAATCTTTGAAACATAAGGCTTAAGATAGGTTTTTGTTATGTTTTTATAAAAAATAAGAATCAGCTGGAAAAATTTCTTTAGAGCCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATAGCTATTTTGCTATG # Right flank : TTATAAGTACTATTAGGTCAATTAGATATCTGATTATTTTTCATGATGAATTACTTGATATAAATAAATTTCTATAATGCACCACAAAACCTACAATAATATGGTAAAATAAGAATATATCTCAGAGAATAATTATATTTTATTGTTCATGAATAATGCTTGCATAAAAAGGGTAATTAATAATAGTTATATTATTGTAAGATATATGGAGGTTTTGATATGAATATATTAATATCCACTTGCAATATAGGTATTCCTGTACTAATGATTTTCATAGGAATTTTATATAAATGTAATTTATATAAAAAGATAGACAAAACATTAGATTTAATTGTACCTATAGCAATGTTTTTTACTGGCTTTTCAGAGAGGGATAGAGAACATTTGTATAAGAATACAAATAACTTGGCTTCGGTTAATAGAAAATGTAGTTTAATATGGAGTATTTCAGGAGTATGTACACTACTACTTACTATAATATCGCTAATATTAAATAAATC # Questionable array : NO Score: 4.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-1.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //