Array 1 3599-3825 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEEGC010000110.1 Clostridium sp. PL3 NG-25456_PL3_lib407054_6879_1_1_contig_110, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3599 30 100.0 35 .............................. GAACTTAAAAAGCAATTTAAAAACGGTGTGAATAG 3664 30 100.0 35 .............................. TTATCTTTATTATAGAATATAATTGATTTTTCTGT 3729 30 100.0 37 .............................. TCTACACTAATACCTTCAATTGGCATCTGTGCTGTTT 3796 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : AATGCAATTAAGAGAGCTGGAAAAAGGTGGAATAATTTATAGGGAAGTCTATCCGGAGTCACCACCAAGAGTGGAATATGGCCTCACTAATATTGGAAAAAGCATGCAGCCTATATTAAGTGCCATGTGTGAATGGGGAAAAACTTATAAAATCCATGATCTATTCTAAATTATGTTAATAGCTGGGACGAAGGACTTCAACCTTATTGGATAAATACCAGCAGTAATGATTTAGTGAAAAAACTTATAGCACGGGGAATTAAGAATATAATAGAAGTTGGTATTGCTTCTGAAGGAAAAGAGGTTATGGTATTAACTTGATTTTTACCAGGTAGCTCTAAAAGTAAAGTGCCTTTTAAGCGTTGAAGTTCAAGGTTTAAAGGCACTTTTTAAAATATATTTATTAAAATTGAAAAACAGGTGGTAAAATTTTAAGGAAAGGCTTTATTTTAAAGGGTTTAGAGGGTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : TCTTAAGCTAATATATTATTAGTTTTCGCGTTATTTCCAAGTATATCTGTATATAATATCTGTTCTTGCCAATTTATAATGATAAAGGCTGTGTATTTAGGAAGTTATATCCCTTTGTGCACAGCCTTTATATATTTTTTGTAGTAATAACAGTCTTCTATCTTGTTTTAAGATTGAGGAGGGGTATAATGATAAATCATACAATTGAAACAAATATTTGAAGATGGTATAATTTTAGACAGTATATGAATTATATTGTAGTAAAATGAAGAAAAGGAGGATAAGTTGTTGGAGTGTAATAACTTGATATATGCATTTGCTAAATATCTGAAAAATATTGATAAACAAAGATATAATAAATTATTAAATATATTTTCAATTAATAACAATGATAATGTAGAAAAGGCATATAGTGCAGCTATAGGTAATCAGAAAATTGAAATGGGAAAGAACTCTATTTATAAATTGAGAAACATATTATCGAATTCTGATAACAGTTA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 11882-12114 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEEGC010000110.1 Clostridium sp. PL3 NG-25456_PL3_lib407054_6879_1_1_contig_110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 11882 32 100.0 34 ................................ CGCTTCAAATTTATCTACATTCAAAGAAGCTATT 11948 32 100.0 35 ................................ GTCAGACGAGGCTAGTTTTTGTAAATGGGCCAAGG 12015 32 100.0 34 ................................ CAAGATCACGGGCCTGGCTAAGTTTGGTTTTGCG 12081 32 87.5 0 ................GA.........C.C.. | T,A [12102,12107] ========== ====== ====== ====== ================================ =================================== ================== 4 32 96.9 35 GTTGAACCTTAACATAAGATGTATTTAAATAA # Left flank : TAGACAGTAAGCCATGGCTTAAAGAAAAATATTCAGTAGATTTGTTAGTGAAAAGGTTAAACGATAATTTAGAGAAAAAACTTAATCAAATTGGAGAAGAATGTGGAGTTATGGCATCAGGTACGTTTATTAGTGAAATAGAAATTTTGAATAAATTTCCTATGAAATATAGCTATAAATCCATTAATCTATTGGGAAATAAAGTGCAGATAAAGGTTAATCAAGATGAATTTAGTCAGAAAAAGGCTTTAGCAGCTATTGCTTTGGGCTTAGGAGAAAAAGGCAGTAGTCTTGGAGCTGGTTTTTGTGATTATAAATAATATTTTACCAACCTTAATTTAAAATAAAGTGCATTTTAAGTCTTGATATTCAAGGCTTAAAGGTATTTTTTAAAACACATTTGGTGAAATTGAAAAACAGCTGGTAAAATTTTAAGGAAAGTGTTTATTTTAAACGGTTTAGAGGGTATAATAAAAATAGAAAATGGCTATTTTACAGTG # Right flank : ATATTGGAGTGTTGATATTGCTATAAAAATTAGTAGTAGCCTTTACTTTTTATAAATGTTTAAACTTATAGAATTCATGTTAAAATAATTATTAAGGAAGGAAGTGATTAGGTGAAAAAAATTCCTATTGGTATAAGTGATTTTAAAAAGTTAGTAAGTGAAAAGTACTATTTTGTTGATAAAAGTCCATTAATAAAAGAAATTTTAGAGGATGGTAGTGAAGTTATATTGTTGCCAAGACCAAGGCGTTTTGGGAAAACTATAAATATGAGTATGCTTAAGTATTTCTTTGAGAAAACTGATGAGGATAACAGTTTTCTTTTTAAAGATTTAAATATATATAAACATAAAAATAGCATGGAAAATCAAGGAAAATATCCTGTGATTTATATATCATTTAAAGATCTAAAAGATAAGGATTTTAATAAATGTTATGAAAAAATAAAGGACCTTATAAGTGAACAATATGATAGATTCAGCTATGTAGTAGAAAAGTTAAG # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAATAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 220-775 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEEGC010000055.1 Clostridium sp. PL3 NG-25456_PL3_lib407054_6879_1_1_contig_55, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 220 30 100.0 34 .............................. ATTCTAATATATCCTCTAAAATTGGTATTTCTAA 284 30 100.0 38 .............................. CCTTCTTACATTATTTATTTAATGGAGATGCAGTTCTT 352 30 100.0 37 .............................. TTTTGTAATTTTATATAATCTTTATAAGGAATACTTT 419 30 100.0 35 .............................. AAAAAAACATGATTATGTAGAAACTAGACAACCAG 484 30 100.0 36 .............................. TCATTACAGGGAACGCTCCAGTTTCTGAGAGAATTT 550 30 100.0 36 .............................. TTTGATTCTGAAGATTCCTTTGAATATGCTAGAGTA 616 30 100.0 35 .............................. GATAAACTCAATACCAAAACATTCTCCAGCAGATT 681 30 100.0 35 .............................. ATAAATTCTAATGATAATTGATTAATATAATTTTC 746 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 100.0 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : TATTGCTTTTGAAGGAAAAGAGGTTGTAGTATTAACTTGATTTTTACCAGGTAGTTCTAAAAGTAAAGTGCCTTTTAAGTGTTGAAGTTCAAGGCTTAAAGGCGCTTTTTTAAATATATTTGTTAAAACTGAAAAACAGTTGGTAAAATTTTAAGGAAAGGCTTTATTTTAAAGGGTTTAGAGGGTATAATAAAAAATAAGAATGGCTATTTTACAGTGG # Right flank : TTGTAGATTATGGATGTAACAATTAGGGAATAATATTAAGTTATATGCTATTATATAACTAAGAAACATAGCAAATGGAGGGATAAAAGTGTGTAGAATAAACCCAAAAGTAGATTTTGCATTTAAAAAGCTATTTGGAAGTCCGGAAAATAAGGATATACTAATTTCATTTATAAACTCAATAATAAGAGAAGAAGAAAAGATAAAGGATATAGAACTAAAAAATCCTTATAATATAGCCAACTATAGAAATGGTAAAATGACAATATTGGATATAAAGGCAGTAGATGAAAAAGGCACTTGGTATGATATAGAAATGCAGCTTGCAGAGCAGGGATATTATGATAAAAGGGCCTTTTATTATTGGGCAAAGGTATACTCAGAACAAATAGAAAGTGGAAATGATTTCGAACTTTTAAGAAAAACTATAGCTATAAATATATTGGATTTTAACTATTTAGATGAAGAAGATTTTCATAATGTATATAGAGTATATAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 1889-2178 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEEGC010000055.1 Clostridium sp. PL3 NG-25456_PL3_lib407054_6879_1_1_contig_55, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1889 30 96.7 34 ....................A......... CAGATAAAACTGCCTCTTTGAATACTTTTTATAT 1953 30 100.0 36 .............................. TATTTAAGTAGTCAAGTATCCTTTGATACCTGTATA 2019 30 100.0 34 .............................. TTATTGTAAGGAACCTTTGCAGAAGTAGTTAGAA 2083 30 100.0 36 .............................. AGATGGTGTACGGGAGCTGGAACTGGTGCAACTGAT 2149 30 93.3 0 ..........................G..C | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 98.0 35 GTTGAACCTTAACATAAGATGTATTTAAAT # Left flank : TAAATAGAGCTTATGAATTAGACTCAGATAGAATACCAGAAGAATTAGCAAAAGATGAAATAGTAAGAAAAGCTATAGAAAAGTTAGAAATAATGTATCTTGATAAAGAAGAAAGAGAATTATATGAAAATGATTTAAAAAGATTAAGGGACTATAAGGCAGCCTTAAGAACAGCTGAGGAAAAAGGTATTGAAAGAGGCATTGAAAAAGGGAAAATAGATATAGCTAAAAATTTATTGGATGTGCTAGATGAAGAAACTATAGCAATAAAGACAGGGCTAAGTGTAGATTTTATAAGAGACTTAAAAATAAAGCAAGAGTAATTTTACCAGCTGCAGTTAAAAATAAGGTACCTTTAAAGCCTTGAAATTAAAGACCTAAGGGTACTTTTTTTATATATTTTTAAAAATCCAAAAACGGTTGGTAAAATTTTAAGAAAAGCCTTTATTTTAAATGTTTCAGAGGGTATAATGAAAAATAAGAATGGCTATTTTACAGTG # Right flank : CAGTATTCAATTGTTAAAATTCCTCCAGAATAATCATTTTTAAGGGTATTTAGATTAAATGCTACTGCTATAAAAATCAGCAGTAGCATTATTTTATAAATGTTTAGATCAGAGCATTTATGTTAAAATAATTATTAAGGAAGGAAAGTGGTCAGGTGAAAAGAATTCCTATTGGTGTAACAGACTTTAAAGAGATTTTAAATGATAATTATTATCTAGTAGATAAAACTTTGCTCATAAAAAAGAGATAGTAGAAGATGGTTCAAAAGTTCTATTATTGCCAAGACCAAGACGTTTTGGAAAGACCATAAATATGAGTATGCTCAAGTATTTCTTTGAAAAAACTGAGGAAGATAACAGTGTTCTTTTTAAAGAATTGAATATATATGAACATAAAGATATTATGAAGAAGCAAGGAAAAAACCCTGTAATTTATATATCATTTAAAGATTTGAAAGATAAGAATTTTAATAAATGTTATGAAAAAATAAAAGATATTC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 3 16116-16931 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEEGC010000055.1 Clostridium sp. PL3 NG-25456_PL3_lib407054_6879_1_1_contig_55, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16116 30 100.0 36 .............................. TATAAAGGCAACTTTTTAACTATTTTTCTTGCTTCT 16182 30 100.0 36 .............................. TTGCTTTTTCTCTTTCAAGTTCTAGTCTGTCATACA 16248 30 100.0 36 .............................. TAGAAAATTTAATTAATGGCTGTAGCTACACAGTGG 16314 30 100.0 34 .............................. ACATGTGGCTTTAGTTGGTGAAAATGCAATCAAC 16378 30 100.0 36 .............................. GAAGTGCTATACTCTAAAGATAACTTTAGTCTCTCT 16444 30 100.0 35 .............................. TCCAAGTGAGAGTGCTTTTACCTTTTTATCTGGAG 16509 30 100.0 36 .............................. AGAGAGAGAATTAATTTGCAGAACATTAGAAGAACA 16575 30 100.0 35 .............................. ACTTAAACAAATGATGGATAATGAAACATGGTTGA 16640 30 100.0 35 .............................. GAAATAGATAACCTAGAAGGTGGTGAAATACAAAA 16705 30 100.0 36 .............................. TCTGGTATAAATGGTTTTAAATTTTAATAATTTGGA 16771 30 100.0 36 .............................. AAAGTTCAATTTAAGTTATATGGTGTCAGTAGTGAT 16837 30 100.0 34 .............................. AAGAATACATCATCTGGATCATTTATTTTTACTC 16901 30 96.7 0 ...........................T.. | T [16924] ========== ====== ====== ====== ============================== ==================================== ================== 13 30 99.7 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : TATTCCATTTAATCTTAAGGAGAATATTTAATATGAGTAAAAACTTAAATTTTAATTATGCATTTCTATTTTATGATGTGAAAGAAAGAAGAGTTCAAAGAGTATTTAAGGTTTGCAAAAAATATCTTTCTCATTTTCAAAAGTCTGTTTTTAGAGGAGAGATAACGCCATCAAAGCTGATATCTCTTAGAAAAGATTTGAATAAGGTTATTGATGACAAGGAAGATTTTATATGTATAATTAAACTTTTTAATGATAATGTATTTGGAGAGGAGATACTTGGAGTAAAAGATAATCCTACAGGTGAAGATTTGATTTTGTAATTTTTCCGGGTGAAAATAAAGGTGAATTGACATGTATCCATTGAAATACAATGGGATAGGTTATATTTTTATTGATATTTAAGAAAACAAAAATCGCTTGGAAAAATCTTTGTGAAGTTCTTTATTTTCAAGGGCTTCAAGGTTATAATAAAAATAGAGAATGGCTATTTTTCAGTG # Right flank : TTCTTCTCCTAATAGTTCCTTTTACAAGTGGTAAGGGTAAAAGTGCCTTTAAAGCTTTGAAATATAAGTACTAAGGGCACTTTTTTCATATTTTAGTCATTAAAAATAAAAAAACTTCCTACATCTCCACTAACTGTATATATATTAGGTGAAGGGAGATGATAAATATGGCTGCAACAGCAACAAAACTGCAGACTACATTATTAATTAAGTATAAGGATGGTGTAGATGCCAAGGGGAAGGAAAAAATTAAAAACCTAAGATTTGCAAAGGTTAAAACTGGAGCTACAGAACAAAATATATATGATGTAGCTATGGAAATTTCAACGCTTCTTGGAAAAACTTTGGACGAGGTAATAAGAGAAGATCAAAGTGGAATAACTAATGCATAATTAATTGAGAATTGACAGTGGATAGCTGTCCAGGGTCAATTCTCAGCTTACAATTTAAAGAATATGAGGGGGAATGAGTTTATGAGCAAAACATTGGTTATGAATTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 3308-3599 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEEGC010000150.1 Clostridium sp. PL3 NG-25456_PL3_lib407054_6879_1_1_contig_150, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 3308 29 100.0 37 ............................. GAAGAAACCATTAAAGATTTAGTAGATACTTTAGATA 3374 29 100.0 37 ............................. ATTAAAACAATCTTTCCATTTTCTTTAACGAATAATT 3440 29 100.0 37 ............................. GTTACAGAAACTCCATTTATAGTAGGTATCCCACAAT 3506 29 100.0 36 ............................. AAACTTCCATACATCATAGAATTTGTTGTCGATATG 3571 29 82.8 0 ......................AT..GTG | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 96.6 37 GGTTAAGATTAACTATATGGAATGTAAAT # Left flank : GGGCAAATTAATTTGGAATTATTGTCTATGCAAGAAGCAACTAAAGGAACTTTACTACAAAATTGGGCTTATTATCAACTTCAACAAATGATAGAGTATAAAGCAGAACGAGAAGGAATTGCAGTATGTTATATAGACCCATACCACACATCACAGACTTGTAGTAAATGTGGAAATTACGAAGATGGACAAAGAGAAACACAAGAAACTTTTATTTGTAAGAAGTGTGGATTTAAAGCTAATGCAGATTATAATGCAAGTAGAAATATTGCAATGAGCACAAAATATATATCTTCAAAAGAAGAAAGTGAATATTATAAAAACAGTTTGGATGATGATTCTGCAGTAAATCAAAAATTTTAAGAAATACCTCTAATAATAGTAAAATCAATAGTTTAAGGCAAATTACTTAAAAAAATAAAAAACACTACCATACATTTACTGCAAAAATAAGATTTAATTGAGTGTTAAACCTCTAATTTAGCTCAATTTTGAGATGG # Right flank : GTATTATACAAGATGAGAAAAATAATAAATAGTTAATTAAAAAATGTATATAGAACTGTAATCTAAGATTTTTATTAATAAAATAACCTTCTGTTTTAGCAGTAGAAAACAGGATAAAGGTTGGGGCGATTTAGCGTCCGAAGTTGGAGGTTTCCAAAGGTTTAGACCATAAGGAATTAAGCACTCCAAAAGGTTAACCCTCTTCACAGTATTCCGAGAGGCATTCCAGTATGCTCACGAGCATATGCTACTGTATAGTTATTATATTAGGATATATGTAATGATACATATATCTTTTTTATTTGCTGAAAAAAATAATATAAAATAAAGATGTAGATAGATTTGTTTTGGAAATTATTACAAAATAAAAAAGACTACCTAAAAGTAATCTTAAAATATGGTAATGTTATACATTTACCCATATATCGTTTTATGGTAAAATAGAATTTAATGTATAAATATAGTGAATTCTATTTGCCTAATATTATCATATCATTAGA # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTAAGATTAACTATATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //