Array 1 16825-12233 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESHJ010000055.1 Acinetobacter baumannii strain M12 NODE_55_length_21415_cov_10.477217, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 16824 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 16764 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 16704 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 16644 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 16584 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 16524 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 16464 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 16404 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 16344 30 93.3 30 ............................GA TTACATCCACGAAAAGAGCTTTAATCAGGA 16284 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 16224 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 16164 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 16104 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 16044 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 15984 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 15924 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 15864 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 15804 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 15744 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 15684 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 15624 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 15564 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 15504 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 15444 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 15384 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 15324 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 15264 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 15204 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 15144 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 15084 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 15024 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 14964 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 14904 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 14844 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 14784 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 14724 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 14664 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 14604 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 14544 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 14484 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 14424 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 14364 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 14304 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 14244 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 14184 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 14124 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 14064 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 14004 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 13944 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 13884 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 13824 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 13764 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 13704 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 13644 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 13584 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 13524 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 13464 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 13404 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 13344 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 13283 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 13223 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 13163 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 13103 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 13043 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 12983 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 12923 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 12863 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 12803 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 12742 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 12682 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 12622 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 12562 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 12502 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 12442 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 12382 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 12322 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 12262 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 77 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //