Array 1 4441813-4434345 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068226.1 Shewanella algae strain A291 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4441812 28 100.0 32 ............................ TTGTTGTTAATCCTGATATTAATTCAAAGTTG 4441752 28 100.0 32 ............................ AATCGCCGGATGACTTATTTCAAAAGTCTCAA 4441692 28 100.0 32 ............................ TCCTTTGCCTGCTGTAGTGCGCGAGCCTCAGC 4441632 28 100.0 32 ............................ TCGACTTAATCCTGTTTATCGTATCTTCTGCG 4441572 28 100.0 32 ............................ TCAATGCGATTCTCTGCTTGTGCGTCAGTTTG 4441512 28 100.0 32 ............................ TTCCAGGTACACCTGAGAGCCTTTCCTCAGAT 4441452 28 100.0 32 ............................ TTGAGTGCAAAGAGTTTACCGGAAGCGAAGCT 4441392 28 100.0 32 ............................ TCTGATGCTGCGCCACCAACCTCGTCTGATGT 4441332 28 100.0 32 ............................ TGTCCATCCATCGAATCTGGTGATTGTGGTTG 4441272 28 100.0 32 ............................ TGACGAATCGCACGACGTAAAGGCTCAAGCTG 4441212 28 100.0 32 ............................ GCGAATATAATCGGCGGTTGACACCTTACCCT 4441152 28 100.0 32 ............................ AACTTCGCCTGCCGGGGCAACGCCTAGCACCG 4441092 28 100.0 32 ............................ GTTAGGCTTAGTCCTGGCCTTGGCAATCAATC 4441032 28 100.0 32 ............................ CATCAGCGACATAAGCCACGCTCAGTCGGCAA 4440972 28 100.0 32 ............................ ACCTGGTTTCGGCATACTGCTCACAGGGTCGT 4440912 28 100.0 32 ............................ AAGAAAGCTGACGTGTTGATTCAGGCTCTTGG 4440852 28 100.0 32 ............................ GTGGTCAGAAGTCCTCACCGCTTGGTGGAACA 4440792 28 100.0 32 ............................ GCCTCGTTGCTCCGCTAATGCCAGACCGTTAA 4440732 28 100.0 32 ............................ AGGGAAGCATTCAAGGCTGAGACTGCCGATAT 4440672 28 100.0 32 ............................ TCAATTTGACGGATGACATTTTATGGCCTCAC 4440612 28 100.0 32 ............................ AGCACCACAGAGTTGATGATGAATCACGACGC 4440552 28 100.0 32 ............................ AACCACCCACCACAAGCCCGGCCAAGAGCCGG 4440492 28 100.0 32 ............................ ATTCGTGGCCATGACGTCGAAGAGTTTATTGA 4440432 28 100.0 32 ............................ TGCTTCAGTTAGTTGCTTGGCTAACCTGTCTG 4440372 28 100.0 32 ............................ GTTACTTTGAGGCAGGAGACGCCGATATCAGC 4440312 28 100.0 32 ............................ TGATGATGCTGTGCGGCTGCTCATCAACGCAG 4440252 28 100.0 32 ............................ AGAATCAACCGATTCTAAGGAGTTAAATTCAT 4440192 28 100.0 32 ............................ GCGAAAGATTACTGATGGATAAGGAATTCCAC 4440132 28 100.0 32 ............................ GCGCCTACCTCAAACACCTCAAGGAATCGGTA 4440072 28 100.0 32 ............................ GCTTAGCTCAAGAGTCGAATGCTTCACCAGAA 4440012 28 100.0 32 ............................ TGGCGCGCTGATGGATTACGCGGCAGTGAAAA 4439952 28 100.0 32 ............................ TCACCGCCGGAACTCGGCGGGGCCAATAGCAA 4439892 28 100.0 32 ............................ CATTTGCGGCATTTGTTGTTAACTGGACGATT 4439832 28 100.0 32 ............................ CCCAGGATATAACTACGCTGCAATCCTCTGTA 4439772 28 100.0 32 ............................ TCGGTACTTCTGCGGCCTGCATGTGCCATACA 4439712 28 100.0 32 ............................ ATCTCTGACTTCGCGAGGCTCAAGCTCATCAT 4439652 28 100.0 32 ............................ TACTTCGGGGTTTACGCCTGCGATGCGTGTCA 4439592 28 100.0 32 ............................ ACGGTGAATGTGCAAGCCAAGACTTCGCATAG 4439532 28 100.0 32 ............................ TCAGCAAAACCAAGGTTATGCGCCAAAGCCTC 4439472 28 100.0 32 ............................ TCAGCAACTGCTCAACGGCCGCGTCCACCTCA 4439412 28 100.0 32 ............................ CATTTGCGCTGTCGGTTATCTTCTTGCTACGT 4439352 28 100.0 32 ............................ TGAAAACCATCAGCATGGTGGCAACCAAAGGC 4439292 28 100.0 32 ............................ ACATTTTAGAGTCGAGCACTGTGGAGCCGTTT 4439232 28 100.0 32 ............................ TATATGCTTGAGTTTGGAGCCGGGTATATCAG 4439172 28 100.0 32 ............................ TAACCTTGCCCCTTAGTCCCTGCCTGAAGTTA 4439112 28 100.0 32 ............................ TTGATTCAGGAGAAATAGTTCTTGAGTCCATC 4439052 28 100.0 32 ............................ GGATGGCGTAACCGGCACCAATTCAAAAAATC 4438992 28 100.0 32 ............................ AATTGGGCCAAACTGCTGTGTTGCCATCAGAA 4438932 28 100.0 32 ............................ GCGCTGGGAAGTTGTCGGCAATGACTCGTTTG 4438872 28 100.0 32 ............................ AATCAAGATGTCCAGCGCGACAATCCGGGCAC 4438812 28 100.0 32 ............................ AAAACAGATTCATTCCAATTCGATGACATACC 4438752 28 100.0 32 ............................ GGCAACAACAGCAGTCTTATGGGCTGCTGTTT 4438692 28 100.0 32 ............................ TATTGAGAGTGACAGGATTGATAAAGTGATTA 4438632 28 100.0 32 ............................ ACAGAGATAAGCACCATTAGCTCAGCAGGATA 4438572 28 100.0 32 ............................ ATCACTCGGCGCCGCATAGAAGAGCTCAGAGA 4438512 28 100.0 32 ............................ TTCAAGGTCGAGGTAGCCGTCAACACTCAGGT 4438452 28 100.0 32 ............................ AATTCAAAAAATCCATAGGAGTTTGGATATGC 4438392 28 100.0 32 ............................ AATATGATAGATGATCACATCGGTAGTCTTGG 4438332 28 100.0 32 ............................ CTGCTGGTGGACGGGTCAAGGTTTGCAAAGGC 4438272 28 100.0 32 ............................ AGTTCATTGTTTTCAGTTGTCATAATTAGTAT 4438212 28 100.0 32 ............................ AGTAAGGGACGCTGATATTGGTTCCGGGTATC 4438152 28 100.0 32 ............................ GCATCGATGAATATCCCGGTAACCACTGCTAA 4438092 28 100.0 32 ............................ CTATGCGGGCGGCACAATCGGTATTCACGTCA 4438032 28 100.0 32 ............................ ACAACGGTGCAATCTTGCCGATGACTGAGTCG 4437972 28 100.0 32 ............................ ACCAGGGAACGCTACACAGTATTCAGGTTTCA 4437912 28 100.0 32 ............................ ATTATCGTCCACCCGGAAGTAACGATTCAATA 4437852 28 100.0 32 ............................ AATTAGAAAAGAGGCAATGATATGAGCATTCA 4437792 28 100.0 32 ............................ TATCAAAAACCAAAGCGGATGCGCCGTTTATC 4437732 28 100.0 32 ............................ GATAAGCCAAGTCTCTATCACCGGCCGGCGAC 4437672 28 100.0 32 ............................ TCAATGGTGCCTGATACGATTTTGCCCAAATC 4437612 28 100.0 32 ............................ TGGCTCGGTATTTGACCTGTGCGCCACTGGCA 4437552 28 100.0 32 ............................ AGCAGGTAAAACTCATAGCCATTGATGCCGAT 4437492 28 100.0 32 ............................ AGTCATCATGTGTCGCTGTATGAACAATCATG 4437432 28 100.0 32 ............................ AAGCTGTTCCTGGCTGAAGCCTTTTTTCTCTC 4437372 28 100.0 32 ............................ GTACAGTTCAGTAAGCATCCCTTCATCAAGTA 4437312 28 100.0 32 ............................ TACAAGGTTAGTAGTCTTGATTCTCCTTTGCA 4437252 28 100.0 32 ............................ GTTATCAGTTGGTTTTACAGTGATACCGATTA 4437192 28 100.0 32 ............................ CAGGCAAGGAATGAATCTCGCAGCTGTTCAGC 4437132 28 100.0 32 ............................ GTAAACACCCGGAACTGACGCCTGAAACGCAA 4437072 28 100.0 32 ............................ TACGCCGGAAACACACAAAAACACGCCAGCAC 4437012 28 100.0 32 ............................ CATCCGCCGTGCATGTATGGCTGCAAGTTGGG 4436952 28 100.0 32 ............................ ATGTAGAACGCAGCGAACGCTGCAAACGTGCC 4436892 28 100.0 32 ............................ AATCTGCAAAAACTGGCCTCCAGGTAAGGTAT 4436832 28 100.0 32 ............................ TCGTTAGCATCAATAACTTTTGTGATGTTAAT 4436772 28 100.0 32 ............................ CCAAGCCTGTTCTGCAGTTGGCGCAATAAAGC 4436712 28 100.0 32 ............................ ATCACATCTCAAACAGAGCGCAGTCTGAAACA 4436652 28 100.0 32 ............................ GAGATTGCCGATGTTTTTAGTTCTGTCGAGGT 4436592 28 100.0 32 ............................ AGAGCCGACAACATCCTTGACGATCTGCTTTG 4436532 28 100.0 32 ............................ ATTAAACTCAAGCTCAAATTCTGAAAGACCGA 4436472 28 100.0 32 ............................ TGGGGTAAAGTCAAGGCCAGTCTCAATAAGGA 4436412 28 100.0 32 ............................ TACCCAAGGCAACACACCCAGAACGGCAGGGC 4436352 28 100.0 32 ............................ ATTATGAAACGTCAATGAAAAATGACCAGGAG 4436292 28 100.0 32 ............................ TAGTAGGCAGCTTCAACCGCGACACCGCGCTC 4436232 28 100.0 32 ............................ AACCTCAAATAGTACCGCATTGCTCCCACCGG 4436172 28 100.0 32 ............................ AGATGGTGCGACACACTACGAGATAGTTGATA 4436112 28 100.0 32 ............................ ATGCCGTCAAGGTAAACACCTGAATGCCACCC 4436052 28 100.0 32 ............................ CCATAGAACAAAGTTGATCAATAGCACTCTGG 4435992 28 100.0 32 ............................ TATCATAAAGTCAGAGCAACCAACCTCAAATA 4435932 28 100.0 32 ............................ ATTGAAGCTGGGCTGTTGCTGATGACGTGTTG 4435872 28 100.0 32 ............................ AAAGCTTGATGATTATGAGCTTCTTCAAAACT 4435812 28 100.0 32 ............................ TCAAGCCTTGGTTCTTGTCCTGCTCCATTCTC 4435752 28 100.0 32 ............................ TTCATCCCTGTTCCCCCTTTCTCGCTGCCAAA 4435692 28 100.0 32 ............................ CGGTAGAAGAGATGGGACTATATGTAGGGCAG 4435632 28 100.0 32 ............................ TGTTTCCGTAGGTGCCGTGGAAACCTTCGTCA 4435572 28 100.0 32 ............................ ATCGTCTGCCATTTGCTCGATAGGCATTGACG 4435512 28 100.0 32 ............................ CTTCTACCCTTTTATTGCCATAGCCTCGCTGA 4435452 28 100.0 32 ............................ TCCTAGGGCTGTTGGTGCTAAGGTTCCTGAGC 4435392 28 100.0 32 ............................ TAGAACCATCATTGGAGTTAATTAAATCAGAT 4435332 28 100.0 32 ............................ AATACGAAATGGAAGGCCGCAAGGCCAGTGGA 4435272 28 100.0 32 ............................ TTGAAGGCACAGGCATCACCCAGTTGCCGGAT 4435212 28 100.0 32 ............................ GCGCTGGACCTATACCCCCTGGAGCATGGCCG 4435152 28 100.0 32 ............................ TTTATCGGCGCTCATGCGCTGGGTCGCATGGT 4435092 28 100.0 32 ............................ TATTGCCACTTTTGCCCCTTTGATGGTGGCTC 4435032 28 100.0 32 ............................ CGTTCAGTACGAAGGTGTGCGCGTTGACGTCG 4434972 28 100.0 32 ............................ AGACATCCTCGCAATATCAGGATAGTCAGGGA 4434912 28 100.0 32 ............................ TTGCTGGCGGTGTAAATCGCCTTGAGACTGCG 4434852 28 96.4 32 .............T.............. AGCCAAGTTGGTGGATAGCTCCAAGGCATCTG 4434792 28 100.0 32 ............................ TGGAACTAGGGGACTCTCCAAATGAAGCTAAC 4434732 28 100.0 32 ............................ AGATACAGGCTGCTATTCTTGGGTATCTTGGC 4434672 28 100.0 32 ............................ TCATGGTCGATATGCCGTACATTCATATAACC 4434612 28 100.0 32 ............................ GCCAGGGAATGGGTCTGTGCTTTGGTATGCGC 4434552 28 100.0 32 ............................ ACCGTGGCCATCAATGCAGATATGATACCGGG 4434492 28 100.0 32 ............................ TGTCATTCAGAGTAACGACACAGGTTATAATT 4434432 28 100.0 32 ............................ TTGTTGCCTTCGTGCATTGCTTCAATGCCGCT 4434372 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 125 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTCAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATTGAAAGATATCCGCAAAGCACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTAAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGAGAGCGGATAAGCGGGGCCGAGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //