Array 1 2072140-2074585 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134375.1 Veillonella dispar strain NCTC11831 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================================================================================================= ================== 2072140 33 70.6 44 A...T......GAA.....-GC....T..G.... CTCAACAAAACGCAATGCTCATGGATTTATTAAAATATAAGGGA 2072217 33 88.2 44 .............-.........A.A.....G.. TAGTTAAAGCATTATATAAATTCATTATTACAACCTTATATAAG T [2072228] 2072295 34 82.4 45 ..A........TGT.......C...A........ TAGCATTATGCGTAATTAGTAAAGAATGTGAGAAATGGGAGGAGG 2072374 34 85.3 41 ...........GAA...A...C............ TCAATCTACCGAAAAGCCTGCTGAAAAGCCTAAAAAAGCAG 2072449 33 88.2 43 .............-.......C.A.A........ TTTAGACGCTATCAATGGTAGTCAACTATATGCAGTAGTTGAG T [2072460] 2072526 34 94.1 45 .............TA................... GAAATCATCAAGAATAGTACCTAAGCCGAGTGATTGGCTACTATG 2072605 34 94.1 44 ...T..........A................... ACGCTAGAAAATTGCAAGAAAAGGAACAATTACCAATCGTAGAG 2072683 34 94.1 43 .............TA................... TTATTGGAGGTTTAAAATGAAAATCTTTATTAATTATCAACTA 2072760 34 85.3 43 .....A........A......C.A.A........ GAAAATCGGTATATTTTGCCTTTGGAGATTGGCTTTAGGTTTG 2072837 33 85.3 119 .............-......GC.A.A........ GTGAAAAGCTACCTATTCAAGATAGAAAATACGTAGCTACTGTATTTATGTCCCCTGGGGATTATTAAATTTAACCACCTGGTATATTAATCTACAAAACACAATGTTATAGGATTAGT T [2072848] 2072990 34 91.2 44 ...........T.A.......C............ CCAACAATAAGGGTTATACATACATCAACTTGCGAGTATTCGTG 2073068 34 100.0 45 .................................. AAGGTGCGTATCGTAGATAGCATTGAGGAATTATGGAGCGGTAGG 2073147 34 100.0 45 .................................. TTACGTAAACAGAATGAAATGCTTATGAAATTGTTACAAGACAAG 2073226 34 100.0 42 .................................. AGCCAATCATGGAAAAGACATACGTTATAGACAGCAAATTAG 2073302 34 100.0 43 .................................. AAGCGGTAGCTTTAATGAAACATGTAAATTACTGTCTTTCGAG 2073379 34 100.0 42 .................................. AGCCAATCATGGAAAAGACATACGTTATAGACAGCAAATTAG 2073455 34 97.1 44 ..................A............... CGTATGGGTATATTAGCATCAACGGTCTATATGGTTATTGCGAG 2073533 34 100.0 45 .................................. AAACACACAATTAGCGGAGTGAATACATTTGTACTAGATGAAAAG 2073612 34 100.0 45 .................................. CGTTCTCCTCTCTCATGGGTAAAACTACAAAGTTCTGCTTGGGGT 2073691 34 100.0 46 .................................. ATGATTTTCTTTGGTTTGATGATGAGTACATCTATGAGAGCTTAGT 2073771 34 100.0 45 .................................. GGCTGTTAAAGCTAAAACTAGCTCAGAAAAGGACTTATTAAAAGT 2073850 34 100.0 43 .................................. AGTACAAAAAGCGGTAGCGAATACATGATAAACCTAAGCCAAT 2073927 34 100.0 44 .................................. TTGGAAAGTGGACTGGAACGTAAAAATGGAGGACAAAAATGAAT 2074005 34 100.0 44 .................................. ATACAGACATTTTAGTAGGCGACCTCGCCAAATTGCTAAACCAG 2074083 34 100.0 44 .................................. ACTAATTCTGAAAAAGAGCTTTTAAAAGAACAAAATGCTATGTG 2074161 34 100.0 45 .................................. ATAAAACAGTTGAGTTATACAATAGAAATAGCGAATATTATTGGG 2074240 34 100.0 43 .................................. TTTGTACAAGGTGATAATTATTGCTTTGTTACCGCAAAAGGCG 2074317 34 100.0 43 .................................. TAATTCCTGTAAATGTAACTAAGAATGATGAGCAATATGTAAG 2074394 34 100.0 44 .................................. TTTACATCTTTAAAACTACATTTGGTTATGAGCCTGTAATTAAG 2074472 34 100.0 46 .................................. AGAAGAACGCAATTATTTAGAGAACTACGACAAGGACGTATGTGAG 2074552 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ======================================================================================================================= ================== 31 34 95.4 46 TTTCCGTCCCCATCTGGGGATTATTTAATTTAAC # Left flank : GGCGAGTCTCTTCTGCAATATCCATAAATAAATTATTTAATGCACAGAAAATAAGCGTCAATGTCGTAAGCCTTTGCTGACCATCGATAACATCAAATCTAGTCGGATTATTTTCATTGCTAATCAAAACAATATTGCCTAATAAATACCCAGGCAACGTATCTAATCTATCTGTATAGTTATCCGTATCTTCCTTGAAATCAGAAAAAAGTGTATCTACATCTTTATCTGTCCATACAAAACTCCGTTGAAAGTCAGGTATAACAAATTGATTTTTATTATCTAATATCCCCTTAATATCCTTCATTAAGGACGTAATTTCAGCCATGATATCCTCCCCATACCAAAATTTATTTTCTTATATCTATTAGATCATAAAAATAAGATGAAGATCAACACTTTAAATTCATCAAACTCTCAAAAGGCAAAATATTCTATACACAAAATAACCACCCTATACAAGAGTGGTTATTTTTGTCTTTAAAAGAAAATATTGATTT # Right flank : CCCTGTCTCTGAAACAATAAGTATTTACTGGTTCCAAAACCTAAAAAACGGCGGAGATTGTATTTCGGCCTCAAAAGGCACTTTAGCCAGCTAAAATAATACCGTTTAATCGCGCCACTATCACAACGGCGCAGATTTGTTTTTTCAAGGGTTAAATCTAGGTCTATTATAGCATAGCTTCAAGGGAAATGAAAAATATATGAAAACAGAGCTATCTCGTGACAAGATAGCTCTGTAAGAGAGTAAATCGTTATTTGAGTTGTCTTAATGATAACCTTTTATTTATTTCTCCCGTATGTTATTGTTCTCCCTATATTTCCTCCTCTCTTTCTCTCCCCCTATTACTTCATCTCCCCTACTTATTCTTCTCTTCCCCCTAACAGTTTTATCTTGTTAGGTCTCTCCAGGCGATAAATAGTTCGGCCACGACTTGTGGGTTTTGGCTAAGTTTGATGCGGGCTAGCATTTTACGCACGTAGTTACAGTGTTCTAGCATAGCT # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTCCGTCCCCATCTGGGGATTATTTAATTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [48-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //