Array 1 2956-197 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZAP01000149.1 Prevotella copri strain iAU3127 NODE_143_length_3241_cov_9.38481_ID_293, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2955 30 100.0 34 .............................. ACTCTTCGTACTGCTGTTTTATAGTCTTTTTTGC 2891 30 100.0 34 .............................. TATCATAAATGCACTCGTTCTTATTAAAGAAGTG 2827 30 100.0 34 .............................. AAACTGTTTTGTGTGCGCTTCAGTGCTACAGCGA 2763 30 100.0 34 .............................. GTTGTAACGGGCTGCAAGTTTGCAGCGTTAACAG 2699 30 100.0 35 .............................. CTGCCTCCCAGGTGTACCCACTGCCTGAAGGAGTG 2634 30 100.0 36 .............................. GGTTGTCCCCACTGCCTGAAGGAGTGCACCCCACTA 2568 30 100.0 35 .............................. TCTCTATTATAGAGGGTGAAATTTGAGGTAGTCGT 2503 30 100.0 34 .............................. GATAGTTCAGCTTCTCCAGCTTGGTGTCTGCTGT 2439 30 100.0 34 .............................. AAGGCAAGCGAGAAGTTCGATGCCAAGGCTTTTC 2375 30 100.0 35 .............................. TATTTTGCTGCACTCGCTGGCGTTGTCGGTGTTGG 2310 30 100.0 38 .............................. GTGGAGAAGCCCTTGACGAGTGCTTTTGCTCCTGCAAA 2242 30 100.0 34 .............................. GCCTTGATGAAGTGAAGAAGCAGACTGGAACTTG 2178 30 100.0 37 .............................. GTGTTCGTCTGTTATGATTTCTATCTTTTTCATATTT 2111 30 100.0 35 .............................. TGCGTAGAGAAATATCGCTCTCGTCAGTTGCCCGA 2046 30 100.0 35 .............................. CATAGTTCAATCTCTTTTACGAAGAGGTTTACTCC 1981 30 100.0 35 .............................. GTGTTTTACAGAGGATAGTAATAAAGTCGCCCTGT 1916 30 100.0 36 .............................. AGTTAAGCAATAACCTGGTAAAGATGAAGCAGATGA 1850 30 100.0 34 .............................. TCAGTTTTGAGGATACGTAAGATACCCTCAAGTA 1786 30 100.0 34 .............................. GGTAGCAGAAGACTTTAAGGACCGTCTCATTATT 1722 30 100.0 35 .............................. ACGGAAAGTAAGATTGTAACCGAGAGCGGGCAAGG 1657 30 100.0 35 .............................. TTAGTAGAACCAGCTTCACCGATGACGGTACAGAA 1592 30 100.0 34 .............................. TGTCCCATTGGACGTGCATCCATATTGAGGTGGC 1528 30 100.0 34 .............................. AATCAAGTAACATGTCCTCAGCTTGCGGACGTAT 1464 30 100.0 34 .............................. ACGATAAGACCTCCCCTGAGTACATCGCTCAAGG 1400 30 100.0 36 .............................. TCAGGGATGTTTATTCGGGTGTTGTCGAGTTAAACA 1334 30 100.0 34 .............................. TGCAGAAGTATGCCGGCCTAACAGAAGATCAGGT 1270 30 100.0 35 .............................. AGCAGGAACAGGCTGAGTATGCCGAACTTCAGAAA 1205 30 100.0 36 .............................. CCAGGAAGTGAAGGATAGCGTATCGGCTATTCAGCA 1139 30 100.0 35 .............................. ATACTATTATTCAGAGATATCATGGATGAATGAAT 1074 30 100.0 34 .............................. AAGTCTGCCTTACCTGTTTTGATGGTGATAGCAT 1010 30 100.0 36 .............................. TGGGGAAGGGAAAAAGTAAGAAAAAGCAGCAGTACG 944 30 100.0 35 .............................. TGGGGAAGGGAAAAAGTGAGAAAAAGCAGCAGTAC 879 30 100.0 36 .............................. TCCTTATACTCGTTGAAAGCGACTGAACCCTTGGCT 813 30 100.0 34 .............................. GGAGCAGATTACCGAGACCACCGATTCCTCCGGC 749 30 100.0 34 .............................. TTATTGAGGATCAATTCTGTGCCGACTGGGTATG 685 30 100.0 35 .............................. AATGATAGAGAGACGGCAACCACTATCATAAAAAA 620 30 100.0 34 .............................. TGGCTGCAGCATGCTGCCCGGATAGGGGGTGTAC 556 30 100.0 35 .............................. TCACGAAGCAGGGCGACCTTCTCCCTTGCAGGCTC 491 30 100.0 36 .............................. GTCTTCTACACTCTTATCGGTCGAGAGCACCAGGTG 425 30 100.0 36 .............................. AGAAAAAATGAATCAAGACACTAAAGACAAAATCGA 359 30 100.0 35 .............................. TACATATAGCGCATCATGCCCATCATCATCATGTA 294 30 100.0 39 .............................. ATAGACAATATGTATTGAGTTAATTCCGAACAAAGTTCT 225 29 83.3 0 AA......C................-..T. | ========== ====== ====== ====== ============================== ======================================= ================== 43 30 99.6 35 GTTCTAATTGTACCTTTATGGAATTGAAAT # Left flank : TGCCCCCAGCAGGGAGTGGGAATGAAAGTTAAGAACAAGCCTTGACACAGTTTAAATTACACCCCCTATAAAAGAGTTGTTGATGTGGTTCTATTTTTCCGTTTCTAGGTTCGGAAAAACCTCCAAAAGTGTTCTTTGACTTATTGAAACCTCCATAAATAGGCAGGTTGTCGTAAGGCCGCAGAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTGTATCTTTGCACCCGCAAACCTATTGATTCTTCGAGCATCTATGTCTAAGGATTAACG # Right flank : TCAGAAGTACTGATAGCTTTAGTATTATACCGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCTGCCACAGCATTCGTCTCCTCCGGTCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTCCGGTCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTCCGGTCACTGCATTCGACT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATTGTACCTTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //