Array 1 74241-73753 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARMV010000003.1 Listeria booriae strain FSL L7-1850 NODE_3_length_414879_cov_43.984325, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 74240 30 100.0 36 .............................. CCTTCTGGCTTCATGTATTTTTGTCCTACTGGAATT 74174 30 100.0 36 .............................. TCAGGAATAGATGTCAAGTGGCATCGTAAGGGTGGT 74108 30 100.0 36 .............................. CAACATTCTAAAACAAGCTAATGAAGAAGTATCACT 74042 30 100.0 36 .............................. GACGATATGCTTACAACAATTGACATGAAAAATACT 73976 30 100.0 35 .............................. ACACAAGAACAGCCTGTGCAAACTGTGCCGTATGA 73911 30 100.0 34 .............................. GTTAGCTTCATGCTCTGCGTATTGTGCGTATTCA 73847 30 100.0 36 .............................. AAGTGCGTGGACGTGTCGAGGAAATGGAAAAAGATT 73781 29 83.3 0 .................A....-.C..G.C | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 97.9 36 GTTTTTATCTAAGTAATGTGAAATGTAAAT # Left flank : AAGGCAAATGGGCTGGTATGTGCGGTGAAATGGCCGGCGATCAAACAGCTGTACCATTGTTGTTAGGAATGGGTCTAGATGAGTTCTCTATGAGCGCATCAAGCATTCTAAAATCACGTTCATTAATCAAACGCTTAGATCGCACAGAAATGGCGAAACTAGCGGACGAAGCACTACAACAAGCTACAGAAGAAGAAGTTGTAGCGTTAGTTAATAAATATACAGCGGAGTAATTTCGTTGTTTGGAAGGCCCGAGGATTTTCCTCGGGTTTTTCTTTGTGGGGAAAGAGGGGATGAAAATTCTAAAAATCTGTCGACCGTCGGTAGTGTGGAAATTAGGGGGCATCGACAGATTTTTGTTAAGCATTGGTGTGCAAGGGATTGAGTCTATTTTTGAAGTTCGGACTGTAAGGTTAGAGAGCGGAAATTTAGGATTTGGTTGTCGGTCGACAGATTTGGGTGTTTGAGGTATGATGGGAGTATGCATTGATGGGGTACCT # Right flank : TAGATTGCCCACAGAAGCAGTGTTTCTATCCATTTTTTATAGAATCAATTATCATTCAACAATCCCCAACCAACTCCATTTGCATTTTTACTCCCCCAGATGTACACTTTGTTTAGAAGCGAACTGTATAGAAGGAGGAGTTTTTGCGATGAAGAAAATTGGATTTATTGGTGTTGGGGTTATGGGTGCTAGTATGGTGCGGAATTTGATGGCGGCGGGGTTTGAGGTACATATTTATACGCGGACGGAAAGTAAGGCGGAAAGCGTGATTCAAGAGGGGGCGATCTGGCATGAGACACCGCAGGATTTGGCGCCTCTGGTCGATGTGCTTATCACGATGGTTGGATATCCAACTGATGTGGAGGAGCTTTATTTAGCGGAGGACGGGCTGTTGACTACGCTTCGATCGGGAGCTATTGCTATTGATATGACGACTTCTTCTCCGAATCTTGCGAAACAAATTGCTGAAGAGGGCAAGGCGCTGAACATTGCGGTGCTGG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 68796-69220 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARMV010000005.1 Listeria booriae strain FSL L7-1850 NODE_5_length_114855_cov_35.235315, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 68796 30 100.0 37 .............................. ATACTTCTAAGAAGTCATCCATATCTAGCGCACATGT 68863 30 100.0 36 .............................. ACTTTTGCGGCTGGTCGTTCAATGTCGATGTTTACA 68929 30 100.0 35 .............................. CCGAATTTATCCGGATTGATTTGCCCTTTCGCATA 68994 30 100.0 35 .............................. GAAGAATATCAAACATTAGCACCAATTGACTTTAC 69059 30 100.0 36 .............................. ACGAACAAAGTTGTAACTTCTTCGGAAGGCGATGAA 69125 30 100.0 36 .............................. CTTGGTAATGCTTCCTCACTCATGTTGTTAATAGAT 69191 30 83.3 0 ....................C..CA...TC | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTTTTATCTAAGTAATGTGTAATGTAAAT # Left flank : GACGCTGAGCGCAACATCAAACCAGTACCGAATTCCGAGAAAATTTGGGATGCGGATATCGTTCTAATTGCCGTCGGATTTGCCGGCACAACCAAATCAGTATTCGAAGACTTCCAAGTAGCAAAAACAAACCGTCATACAATCGATGCTAGAAAAGGTTTTTACCGTACCAACGTAGAAGGCGTCTTCGCATGTGGTGACGCAAGATACGGCCAAAGCCTTGTTGTAACAGCGATTAACGAAGGAAGAGAAGCCGCCCGCGAAGTAGACTTCTATTTGATGGGCGAAACATTCTTACCATGATAAAAAATCTGTCGACCTCCAGTAGCGTAAAAACTAGGGGACATCGACAGATTTTGTTTTTGCTTAGGGGGAGAATGGGTTAGGATGGTTTTCAAGGAGGTGAAAAAAATAAGTAGATGCAAAAAAGACAAATTTCTTGGAGGTCGACAGATTTGGGGTGTTGAGGTATGATGGGAGTAGGAGTTGAGAGGGTACCT # Right flank : CCCCAAATAAGGAGAGACACCAAATGACTATGGAAAAATTAAAACTACGAGTCACCATAGACAGACCTATCGGATTTAAAGACGACTACGGAAATACATACCCAATAAACTACGGATTCGTTCCCGGTGTCATAGCTGGAGATGGCGAAGAACAAGATGTTTACATAATTTCTAAAAATGCAACAACTCCACTTGACATATTTGAAGGAATACTCGTCGCGGTCATACACCGGAAAAATGATACCGAAGACAAGTGGGTAGTTACCTCAAAAAACGAATTATTATCCAAACAAGAGATATTCGAAAAAACGCATTTTCTAGAACAATACTTTGATTCCGTTATCGAGCTTCTTTAACAAATACAACGGTATAAACGCTCACCTTCTCACAAAATGCCGAAATAAAAGATGAATCACTATTAAAAACAGTACACTAACCATGAAAAAACCACTCGATACCCAGTCCATAAAAAAGGATACAAATACTAAAACTACGAGAAC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 72468-72888 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARMV010000005.1 Listeria booriae strain FSL L7-1850 NODE_5_length_114855_cov_35.235315, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 72468 30 100.0 35 .............................. TTTCTTTTGCTGATTTTTCATATTCCTCACGCAAC 72533 30 100.0 36 .............................. AAAGACAAATGGGCGTCAAATCAGTTGTTCCGTCGT 72599 30 100.0 37 .............................. GATTACCTAGCAGAACTCGAAGCGATATTTGAACAAG 72666 30 100.0 35 .............................. GCGATTACGTCGTTTTCAGAAAGCCCTAACCTATG 72731 30 100.0 35 .............................. TCATCTGGAGCTGTTTCCTGGTTATTTCGTTTTGC 72796 30 96.7 34 ............................G. TTATCTGCACAGCACGCAAGATTGGGAACTTACG 72860 29 73.3 0 ............T...-.A.G...CC..CA | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 95.7 36 GTTTTTATCTAAGTAATGTGAAATGTAAAT # Left flank : AATGTTCCACCTCGACGAAGCCAACTGGAAACTGCATAAAAAAGATATCATCAGCAATACGAAAAACTGGGAACCATTCCAAATAGAAGCATTACAACATGAAATGAGCAACTTTGAAGTACTAGATAAAGAACGCCTCGTTCAGAAAACAAAATTCGGCGCGAATCTACAAGTCATAGCGAATTTCTCGAACAAGAATTTTGAGTACGAAAAGAAAACCATTCCTGCGAATAGCGCATTGATTGTGCAAGACGGGAAGAAAAAGATAATTTTTACAGATAATCTTGATTCGTAATAACAGGAAGAAAATCTGTCGACCTCCAATAGTGCAAAATAATGGGGACATCGACAGATTTTTGTTATGTATTGGTACTAAAGAGGTTAGGCCTATTTTCGGAGTTTGGGTTGTAAGATTTGAGGGCGATAATTTAGCATTTTGTTGTCGGTCGACAGATTTGGGTGTTTGAGGTATGATGGGAGTAAGCGTTGATGGGGGACCT # Right flank : AAATAAGGCATTAGTAAAACGAATTGAATAATAAGAGGGTACTATCCATTATTCAGTATTAATGGATAGTACCCCTCTTATCTATTCGCCTCATATGTTGAACATTTTTAGCATGCAATTAACAACAATTATCTACTCAAACTAACTACTTTGGTATCAAGCACGTTACCATTGATATCGTAAGCAGTGATGCGCGCGCTATCTGTCGTGTTAAGGATGACCGTTTTTGCATAATATTTAATAGCTGGTGCAGTAACAGGGATTTTAACGCCCTCTACACCATTCACAGTAAGGCTAATTTTCGCTACGTCTCCAGAGAATTGACCAGTAACATAGCCTTCTTTACCAATTACAAATGGAGCAAGTGTGGTGATAGAACCGGTTGTGACTATTTGATTTGCAAGAGTGACAGTTTTTGTGTCCAGTACTCTACCATTGGCATCATATGCAGTTAGTGTGATATTGTCTGTATTTTTTAAAATCACTCGTTTCGCATAATA # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 304790-303969 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARMV010000001.1 Listeria booriae strain FSL L7-1850 NODE_1_length_1506962_cov_50.894355, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 304789 30 100.0 37 .............................. TTGCATTTTATACGGATACAAAATTGCGGAGAGTTTC 304722 30 100.0 37 .............................. TTCTCAACAACGCTCTACAAATTTACGAGTTAGTTCG 304655 30 100.0 36 .............................. ACACCACAGGGAAGCCCAACCCCTTGTTTACGGTCC 304589 30 100.0 34 .............................. CTCGGACAACCCCTTCGATTCTGTCCGCATTACT 304525 30 100.0 36 .............................. CGTGATACTCTCTTTTATCGTTACCGTGACTGTTAA 304459 30 100.0 35 .............................. TACGAAAGTTAGCCTTTACTTCATACGCTTTTTCA 304394 30 100.0 36 .............................. AAAAGCGATTCAGCAATAAGGTCCCTTGAATCCGCA 304328 30 100.0 36 .............................. CTTTTATTCTATGATATTGAGGTATTCAAATACGAC 304262 30 100.0 36 .............................. TCTGACTGGTCAAAACTAAGCACTGTACAAGCATCT 304196 30 100.0 36 .............................. TCTTGTGGAAAACTTGCTTTATTTTCATCTACTCCG 304130 30 100.0 36 .............................. TTTATTTATAAGTAGGTGGTGGAGAATTGGATATAC 304064 30 86.7 36 ............G....A........G.G. AAGGACAAAGGCCAAACGGTACACTTTACAAACCCG 303998 30 70.0 0 A......C.C..G..C.A....GCA..... | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 96.7 36 GTTTTTATCTAATTAATGTGAAATGTAAAT # Left flank : AAGATTTGGTGGTGAGATATGTATATTATTTTGATTTACGACATAGCAATGGATAACGGCGGCCCGAAAGTATCGAGAAACATTTTCAAAATCTGCAAAAAATATTTAACCCACGTGCAAAAATCGGTATTCGAAGGCGAAATAACCCCAGCACTACTTGCCAAATTGCGAATGGAATTAGACCATTATATTCGTGACGAAGAAGATTCCGTCATTGTGTTTTCTAGCAGAAATGAAAGATGGCTGGAAAAGGAGTTTTGGGGCGTTGCGGATGAGAAAACATCGAATTTCTTTTAGTGTGTAGAAAAATCTGTCGACCTCTAGTAGTGCAAAATAATGGGGGCATCGACAGATTTTTGTTAAGCGTTGGTGTGATTGGGTTCAAGGCTGTTTTTGAAGTTCGGCTTGTAAGGTTAGAGAGCGGGAATTTAGGATTTGGTTGTCGGTCGACAGATTTGGATGTTTGAGGTATGATGGGAGTAGGCGTTGATGGGGTACCT # Right flank : CAATTTGTTTAGCTACGATTGCTTTGGTAGACAATCTCAGTCTACCAAGCAATGTTCGCAGCCAATAGACTCTATTTTCTAGCTCTCACAAAAAATCCTCACGATAATCTTTAACATACTGATCAAACGAAGTAGCCTCATGTTGCAGCAATTCCTGTGCTGTTGGGGTTATTTGTTTTGCGTTTCCCATTTGGGTTATGAAGTAAAGCATGGTCATGACGTTGGCGAATGCTTTTGGGGTTCCTCGTTTTATTATGGTTGCGCGAAATCGTAATAGGGACGGCTTGCTGTATGTTATTTTTCTCCCTAGAATGGCTTTCATCTTCTCTGCCACCTCATAATACGTCAATGCTTCTTTTCCGGTAATACTGTACTTTTGTCCGATATGTTGGGGTGTATTCATCAGGCAAATAGCAGCGATCTCCCCAATATCACGTGTATCAATAAAGCTCGTCCGCGCATTGCCCGCAGGAATGAATAAATCATCATGTTTCTGAATA # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAATTAATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 429149-429448 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARMV010000001.1 Listeria booriae strain FSL L7-1850 NODE_1_length_1506962_cov_50.894355, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 429149 37 100.0 29 ..................................... AAAAAGGAGCTTGAAGAGACGATGGCTGC 429215 37 97.3 29 A.................................... AAGAATATGAAGAAATGTTGGAAAGATTT 429281 37 100.0 29 ..................................... CATTTAATTAAAAACTAAGGAGGAATAAG 429347 37 100.0 28 ..................................... CGACGACACTTTCCGACGTGTCAACAGT 429412 37 83.8 0 T..........................GT.T...TA. | ========== ====== ====== ====== ===================================== ============================= ================== 5 37 96.2 29 GGTTTTAGTCCTCTTCTGTTTTGAGGTACTCTAAATC # Left flank : TACTGTACAGATATCCCCATATCAAATATCTCCGAAAAATCATCAACACTTGGCAGTTTCTTTGTACTAATGATTTCTTCGTCTTGAAGTGTTATAGGTAACGCCTTGCTACCATCTTTCTTCAATAAACGAATAACCTCATCATTTTTGAGAAACGGTTCTAGCGAGTCTTCCAAGTAAAAAGCATCAAGAACTATTTGCTCCTCCTTTACGAAAAGGTGGCTTTCTTGGAACTCCTTGTCAAAAATAGAATTGAATAGCTCTAGCTCTACTTCATCAGACTGTTTTAGACTGTCTCGCGAGTCGAGGAAGAAAGTAAGTTTTATCATTTTTGCACTCCTAACTGCTTTCGAAACTAAAATAGGATACATCATTGTTTTGCAAGTAAATACTGCTTCATTGACTACCGATTGGATGAGCATCACTTTGAATGCTCTATTTTCTATGGTTACTAACCTCCGATTAATTAAAAATAACTTATCCCACTTATCCACAGTAGA # Right flank : CTTTAATCTTTGTAATTCTTTTATTAATAATTGAAATACCCTACGTCACATCTCCAATAGCGCCTTCACAATACTACAATACTCTTCTGAAACTTGATTCGTTTCAATATAACTGTCATTTAATTTTTTTCCACTTAAATGTCTCAATTTTTTTGGTTTTAGGCTTGCTATCACCAATCTGTGTTTATTGTTTTTCAAGTTAGCAAACACAACACACATACCATGCTTATCTAAAAGATCGATTAATGATTTAGTAACTGCGTTCTTTAATTTGCGGTCATATTTAAGCATTTCTCTTAATTTCTCGAATAAATACAATAACGAATATTTATGTTTTGGTGATAAATAATTTAAATGTGCTATATAGTTCCTTCCATTTTTCTCAGAAACAAATAGCCCTGCCTTGTTCATGAAAATATCCAGCTTTTCAATATAATCTGGCCTGTTTTTTCTGGTAGTATTAATCCAGCTATCTACTCTTTCGGTATGTCCAGAACTCT # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTTAGTCCTCTTCTGTTTTGAGGTACTCTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.40,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 432886-433185 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARMV010000001.1 Listeria booriae strain FSL L7-1850 NODE_1_length_1506962_cov_50.894355, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 432886 36 100.0 29 .................................... TGCAAAAGCGCTTAAGCGATGGCTCTGAT 432951 36 100.0 30 .................................... CTGACCTCAGAAAAAATATCTTCCTTGGTT 433017 36 97.2 30 .........................A.......... CCTGCTATTCCAACAGGTGATTATCGCTTT 433083 36 97.2 29 ...............C.................... CATTAGGTAATTTTATAAAACACACGATG 433148 36 86.1 0 .................A.........TG.A..C.. | A,A [433150,433179] ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.1 30 GGTTTTAGTCCTCTTTTGTTTTGAGGTACTCTAAAT # Left flank : GGTTTTTCTTGGTGTAGTACCGCTGACATTAATTCTGTTATTTCTTTATTGATTGCTATTTTACGTTTATCTTTTTCTTTTTTGTTGGGTTTCCTCACTGTTTTGTTGAGAATACTCTTATAAAACGACTCTTTCTTTTTATCAAATATAATTTCTTCTGTCTTGTTCTCATCAATACCTTCATAAACCAACTGGCCTTCTTTACTTGTCCTCTCCATTACAATAGTTCTTCCATCAACTCTCATTTTGGTGATTTTCATTTGTCTGCTCAGCTCCATTTAGTTTTATAGTTGTATAGCTAAATGTTTCCACTTTCATATGTGTCTGATATTGCTAATATTTATCAATATATTCATTATACAAGAAGGTATTGCGCAAAACAACATTCATTGGTAATTGTACACTTTGCTAATAATTGAATAAAGCCATAAAAACTACTGATCCAATTCTTTGAATCACAGTTTTTATGGCTTTATTGTCGAATACTTATCCACAGAAGA # Right flank : TATCTATTTTACTTTCAACAGTTTAACTATACCAGATTATTAGTAACTCTGCATCTTCGCGTAATCACGCGTACTAAATAATAATTTCCCGTACTAAATCAACAAAAAACACCATAAACCGCATCTTACATAGCGATCTACAGTGTTTTCCGTTCTTTCTAAGCGGAGAAACGGGGATTCGAACCCCGGCGCGGCCGGAACCGCCTAACAGATTTCGAGTCTGTCCCCTTCAGCCGGACTTGGGTATTTCCCCAAAATGCAATGTTGTTGTGGCAGGCCTAAATGGCTTGCTTGAACAATTACAAGTTCCATTCTAATGCATTTTTTTCGAAAAATCCAGTTTTTTATTTAATACGCGTCATAAAAATTGCTGCGCATGTGGGGGATTACTTTTTCCCAGGCTTCGATGGTTATTTCACTGGCTTGGGCTTTTTCGTAGTAGACAAGGTCTCGTGGTCGCACAAAGCCCATCATCATTTGCCCTAAGCCTTGAATCGTAA # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTTAGTCCTCTTTTGTTTTGAGGTACTCTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.40,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //