Array 1 97187-96004 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABPRN010000002.1 Clostridium perfringens strain Q041.2 isolate Clostridium perfringens, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================================================================================ ================== 97186 27 100.0 38 ........................... CGTAATAGATGGTATTTCATTTGCTTTCCAAACTTTAG 97121 27 100.0 39 ........................... CTGCATTCTTCTGTTAATCATTTTAAGTTCTTTTCTACG 97055 27 100.0 39 ........................... GGCTGGTAGAGCTAATTTGTTTGGTGGAGAGGTTGTTGG 96989 27 100.0 38 ........................... GATCATAGTACCCATAATACCTATACCGATGGGTAATG 96924 27 100.0 39 ........................... GATTAGAAGCTAAACCATCCTCAGTAAAATGTCCTAAAG 96858 27 100.0 39 ........................... GGCATAAAGTATTCCATACTTTGTAACACCTTGTGCTTG 96792 27 100.0 38 ........................... GTTTACCAACTTGATCTCTCATTACACGAGATGGCGAA 96727 27 100.0 39 ........................... GCTATTAGGACATCTATCTTGCTTAGTAGTAATACATTA 96661 27 100.0 39 ........................... GGAAGAAAATGGTATGGAGTATTACATAAAAATAACTTA 96595 27 100.0 39 ........................... GAACCTAGATGAAAAAGGAGATGTTTCAGATTGGTTTGA 96529 27 100.0 38 ........................... GTGAACTTGCTCCTAATCTTTCATCTACTTGTTCTGAA 96464 27 100.0 38 ........................... GGATATTGAATTTGAATTAAAAGATGATACTACAAATG 96399 27 100.0 38 ........................... GTTAGTAAACGTAAAAAAACTTTATGTAGCTCATATAG 96334 27 96.3 38 ..................G........ TCCTAATATTTCAAGTTCTTTGGGCATTGGACTTAACG 96269 27 96.3 96 ..............C............ TTAATATTAACAAGGAAACAATAATAAAGAGATAATATATTTTATATTACTCATAAAAATGAGTGTTGATTTATTAATAAAGTTTACTTTGTTTTA 96146 27 85.2 43 ...............T...T....G.T ATTAGTTATAAATTTTAAATACATATCATGATAAAGTTCAATA 96076 27 81.5 20 .T.........T..AG...A....... TAATCTTGAAATAATTGTTA Deletion [96030] 96029 26 88.9 0 ...............G......-..G. | ========== ====== ====== ====== =========================== ================================================================================================ ================== 18 27 97.1 41 TATTAATTTCACTATATTAGTTATAAA # Left flank : TTATCAATAGAAAGTAATCAATCAAATTATCTAACAGATACAAAACCAAAAGCAATTATTTTAGGAGAATACTCATGGGGAAATAATATGTTCCAAGGATTAATAACTAAAAATGGAATTAATATTGATGGATTAAAAGAAGTTTTAGATGAATATGATGACTACAGACTAAGTAAAATATGGATTGGATTAAGCAATACCATAAAGTCAGAAAGTTTCAATAATAATATAAAAGAAATAAAAGAAAAGTTAATAGATTATGATGTAAAAGTAACCTCTGTAGGAAAAGTTTTCGATGAATATTTAGAATATATAGAAAAAACTTTAGAATAATAATTTTTGCAGTAAACCTAATTAAAAGCAAAATAGCTATAAGCATTGAAATAACTAAGCTTTAAACAATTTTTATAAAAAGTAAAAAAGCATTACTTAAGGTCTACTGCAAAATTAATGAATTAATACATTTAAAAGCAAGTAATATAGCTATTTTAAGATGGGGG # Right flank : GATATTATTTATAAAAAAATATTTATTAAGGTGGATTATATGGATTATTATATTTTAAAGAATTATAAAGCGAAATTAGATGGAACGACAATATATCAGCACTCATTAAATTTAGTAGATATTCTATCACAATTGAATGATATACATGAAATAGATGATATTAATACTTTAAATAAGTGTGCAATGTTACATGATATAGGAAAATGCGTTAAAGAGTTTCAAGATAATATTGAGAATACTCATAGAAAAGTAAGACATGAACTATTGTCCGCAAGTTATTTAAATCTATCATTTAAAGAAAGACTAATCATTTTATTACATCATAAAAAAATAGATTACTGGAAAAGTGTAATAGGTAATGAGTGTTATGTAGAAGAGCTTGAAGAAATAAAATCTGAGTTAAATTGTGATTTCGAAAATATAAATAATTTTTTAAAGAGTTTATATAGAAGAAATATAGAACAATCATTGAAAGATAAAGAACTTATCCTTATGTTAGG # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.34, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATTAATTTCACTATATTAGTTATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:88.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //