Array 1 608297-607667 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SSHH01000002.1 Alteraurantiacibacter aquimixticola strain SSKS-13 contig2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    608296	    36	  86.1	    30	TCC.A.A.............................	GCGCCCCTCTTACTTCCTCTAGTTCATTGG 	
    608230	    36	 100.0	    31	....................................	GATGATGTTGATCCTGACCTTGTGTTGGCAA	
    608163	    36	 100.0	    30	....................................	CGCGCCTCCACTAGATCATTGTCTGCTGTA 	
    608097	    36	 100.0	    30	....................................	CCCTTACCGCATCACCTGCACCTGTGGATG 	
    608031	    36	 100.0	    29	....................................	TTTTCTGTTAAGTGTCAGATGACGGTGTA  	
    607966	    36	  97.2	    30	........C...........................	CAAGGCTCATTCTTCTATCTCCATCTGACA 	
    607900	    36	  97.2	    30	..........................G.........	CTTATTCCTCCTCTTGAATGGATGCCTTGA 	
    607834	    36	 100.0	    30	....................................	GCGCGACATGCTGGTGTCCTTCCTGATCGC 	
    607768	    36	 100.0	    30	....................................	TGCGGACGGTGTTCTGTATTATGTGCGGAA 	
    607702	    36	  97.2	     0	.........................C..........	|                              	
==========	======	======	======	====================================	===============================	==================
        10	    36	  97.8	    30	GTTGCAGCTGGACCGCGATTTCTGAACTGCTATCCT	                               	       

# Left flank :   CGAAGTCGGCGAGGCAAGCCGCAGCATCATGGCTGCTCTCGCCATATCGCTTGAAGGTGACGCCATCACCTTCAGGAAAGGGGCTGGCCCAATAGCCTTGCGCCCTTACCGCAGCGATTGACGCCGCCAACGCTGCCGCTTGATCAGCAGGGAGTACCCCCGGCCAGAGCAAGTTACCCATATGGTCGCCGCGCGGGTGAATCAGCACGGCACCGATGCGCGATAGATCGGTCATCGGCAGCTCGGCGTTAGCTTAGGAAGCGCGTGAAGGGCGCGAACGCTCATAGTCAGGTCTTCACCTTCTCGATTTGGCCAGGCTGTATGGTTTTAGCATTCCTGGATAAGCAAATGGCAGCTTTTGGGTCCGTCGGCGAATCAGGTGACCAGTGGAAATTGAGAAGGCACATTGCTGACTGGCGCTCATGCCCAATTAGTCGGACAGCTCGTGGGCCGGAAGGAGAAAGGCAGCTTTGCTTGAGCCGACAGTACACATCGGACAT
# Right flank :  CGATGTTCTCTCAAGGCATTGAATACGAATGTATTTGTGAGGCATCGAGGACAGTAAAACGGGTTTCCGAAACCTTCAGAACAAGGCAAGCTGACCGGGATTTTTGCGCTGACGGCGGCGTGACTGGCCGTTGAATCGTATGATGTTTTCATATTGCCGATCCGTGAAACCCAGAATGTGGACGTCGCCCTTGTCTGGCAGGTTGCGTTCGATCCGCCTCACATAAGCTTCGTATTGTTCCTTGCCGGAACAGAACCGGGCATAGATCGAAAACTGGCTCATTTCGAAGCCTTCGCCGAGAAGATACTCGCGAAACTTTGTCGCAGCCCGGCATTCCTCCTTCGTCCCGACAGGTAAGTCGAACATCACCAGAATCCACATCAGCCGATACCCGCTAAGATGAGCGTCGCCACGGAGCTTCACTGCATTTCGGCAGCGGGGATGTGCTGGGCAATGGCATTCCAAGCGAGCGGATCTGGAGGCTGGAACAGGGCCAGCTC

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGCAGCTGGACCGCGATTTCTGAACTGCTATCCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [11,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTGCCGCTGGACCGCGATCTCTGAACAGCTATGGT with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.70,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [58.3-43.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [1.42,4.5   Confidence: MEDIUM] 

# Array family : II-C [Matched known repeat from this family],   
//