Array 1 20230-21051 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJEA01000002.1 Lactiplantibacillus modestisalitolerans strain NBRC 107235 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20230 29 96.6 32 ............................C GGTTTGTTGACGTTCGTCGATACCGTGGGAAC 20291 29 96.6 32 ............................C CAAGCGGAGCAGTTGAATAAGCAAACAGCCTG 20352 29 96.6 32 ............................C ATGATCGCCCCAGATATTGGCAGTGATCCACT 20413 29 96.6 32 ............................C TTAATTGCGTTGTCCTTCATGAAGCGAACTAG 20474 29 100.0 32 ............................. AAAATTATCAGGCAACGCCGGGGCGCTGTTCA 20535 29 100.0 32 ............................. CGAAGGGCCGGGCGGTGAGGGTTCCGCCTACG 20596 29 100.0 32 ............................. TTTTGAGCGGCGGCGCGTCTGACCCGGCCTTT 20657 29 100.0 32 ............................. TTTCAAAAAGTACAACCGTAACCGGCCAATCC 20718 29 100.0 32 ............................. TGCATGTGATACAATTTAGCTAATCGTTGGAA 20779 29 100.0 32 ............................. TGCCGAATCGCCGGAACTCATACTTGTATAGA 20840 29 100.0 32 ............................. TCCCTTCGTCTGGAAGGTGCGTCCACTCTTTT 20901 29 96.6 32 ............................C GTCGAAATGTACGACGAAGGCCGATTTTTCGC 20962 29 100.0 32 ............................. ATTCCAATTCTTGATCCAGAGCTAATCGTGCG 21023 29 82.8 0 ........................GAAAG | ========== ====== ====== ====== ============================= ================================ ================== 14 29 97.6 32 GTATTCCCCGCAGGCGCGGGGGTGATCCT # Left flank : GCTTAATGCTGACGCTTGCGACACCCAGTGCGACTTACCGGTTGTTAAATACCGATTTAAGCGTAATTCCGGCGTTGGTGGCGTGGGCGCAGGAATTTTCGTTGGCGTTGGAAGACCCGCTGAATTTGGCGGCCCAAACGTGGGATTGGCGCCAGTTAACGGTGCCCCAGTTTGAGCAGTTGACCCGCGGAACGGCGTACTTTGCGTGGAACCAGACGATTGGGGCGCCGTTGGGGACGGCGCAGCGGGTTTGAGCTGTCCGAAGTACTAGTAAGAAATGCATTATTTAAAGTTTAATACTGAGTAAATCAGCCTGCGGGACGGGGCTTTCTAAACATAGGATGGCCTGGCTTCTTTTGAGGCTGATTTTTAATCTAGTTTTAAGTAAAAAATGAGTGTTGTTTTTACAAGCAACATGTTATTCTATTAACACCGAAGCAACTAATAAAAAGTGGCTAAATGTGAAATTGAGAATGCTGATTTGACGGGCTTCTGTTAGT # Right flank : GCCGTACTGCAAAAAGAACGCCATCATTACCGACTCAATGTCAGTAACGATGGCGTATTTTTTTGAATGGTTAATGCTGACTAGTTAATGAAACGCAGCTACCGGCTGAAACTGTTTCTGGAAGGCAACGCAAACTAAGCTGCCGCCTATAAAATCTCGCCCACGAACTCGCCAGCCGGCAAGGTTTTAAAGTCATAGCGCTCAAAGTCGGCAACTTGCTTCGTGTACCAATGTAAACTTTCGGTAATCATTAAGTTAACGGCCTCGTCCTTTTCTTGGAGCACGACGATTGGCAGGTTACGCATCGTGGCAACGCCCAATTCGTAAGCCGTTCCCGAATCAAGGTTCTTAGCTTCAAAGTCGAGCACCGTGACGATTACGTCCGCCGCGGCAATTTGCGCCATGTCGCGCTTGAAGATTTCGGTTGCCCACGGCTTAGTGAATTGTTCGGCCTGAGCGTCCTGGTGTAGGCGCGGGGAGTAAAAGTCGCGAACAGTCGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCAGGCGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCAGGCGCGGGGCTGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 18973-17969 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJEA01000018.1 Lactiplantibacillus modestisalitolerans strain NBRC 107235 contig18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18972 28 100.0 33 ............................ CCACAAGTACGTTTGGGGCGATAACCCGCTGAT 18911 28 100.0 33 ............................ TAATATTGTTAATTGTCCGGCTTGCAATGCACC 18850 28 100.0 33 ............................ TTACAAGTTTATCGTACACCACGGACTAGGGCG 18789 28 100.0 33 ............................ TAACTTACTAGTGGGGTTAGTGCACCCTTTTAG 18728 28 100.0 33 ............................ CTTTACAAACGGTTCAATTTCTAAATGGAATAA 18667 28 100.0 33 ............................ TAAATTTATTTCCGTCTTGCGTTCCACCGTAAA 18606 28 100.0 33 ............................ TTACAAGTTTATCGTACACCACGGACTAGGGCG 18545 28 100.0 33 ............................ TGATTATATCATAACATTGTTCTCGTTTGGAAA 18484 28 100.0 33 ............................ TACCGGCTTTATGACTTACGGCGTTAACCGTTC 18423 28 100.0 33 ............................ CTGGTATGAGACTTATAAAAAAGCTAGCATTGC 18362 28 96.4 33 ....................A....... CGGGTGTTGTTCCTCGCCAATGCGACCAACCTT 18301 28 100.0 33 ............................ TGATTATTCATTAGATTCAACCGCAAAGCCGGC 18240 28 100.0 33 ............................ TGATTTGGAAAGTTGCTTTACCGCGTTGACGCT 18179 28 100.0 33 ............................ TAATTTCGTTATAAAAGCCCATACCAGCGTTCA 18118 28 100.0 33 ............................ CAGCACCATGAAGCGCGAACGACAACGCTTTAC 18057 28 100.0 33 ............................ TCCCGACTACATCAATCGAACTGTCGCGCTTAA 17996 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.8 33 GTGTTCCCCGCGTATGCGGGGGTGATCC # Left flank : TACCCGCCGAGGCCGCGGTCAAGTGCGCGGTGTTTAACCTCGGCTACTTACCGGGCGGTGATAAAACGGTGGTCACGACGGCTCCAACCACCTTAACCGCCGTTGAAGCGGTCGAGCAACGCTTAACACCAAACGGGCTCGTCTTATTGATGGTCTACACCGGTCATCCGGGTGGTCAAGACGAGGCCGATGCCCTGTGGGAACACGTACAGCAACTTAATCAGCATGAATTTCAGGTGTTGCAGTACAGCTTTGTGAACCAAATTCACCAGCCACCCTACTTATTAGCGATTCAGAAGCGTGCTCGTCATCAGCAACCTACAAATTAGTAAAATCCAGCGCCGATTGAGTCGGTAGCTGGATTTTTTTATAAAATTCTAGTCATTTTAACTTAATAAAGCGGTTACTTTCGGTATAATAAGAGCGTGGGTCCGGATCAACTTAATAAAAAACGCCGATATCGAAATATTAAAACGTTGATATTACGGGATTTTTTTAGT # Right flank : TGTTGGTGCCATTTTAGTGCTATTTCATATATCATATTTCCCGCATACGCGGGGCCACCCCTTTTCATCCGCCACTTCGACCCCAATCGCCGGTATCCAACCGCAGCTTGTAGAATTACTCAGCTTCACACCTATTTCCTATCGGAGGTACGCTAATGTTTAAGCTCATCGATCATCTTGCGAACGCGCTAAAGTCCCTCTGGTCCGTTGCCATCACGCTACTCACCATTGTTATCACAGTACTTGGCATCATTTTTATCCTAACCGCGCTATTTGGTTAGGATTCAATGCGGTTGCTTGCCCATCACCGCCACTTCCAAAAATGACCCCTACGAAAAAAATCGCAGGGGTCATTTTTATTGACTTAGAAACTGAACAGCCACAGCTATTCGTGCGACTTCAGTTTTTCGTTCAAATGATTCAATTTTTCTGCGTGCTGAGCGGCCGTTAGTTGCGGACCGCGATCCAACCAGTTGACGAGGATGGCGAGTACGACCAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 141458-141853 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJEA01000003.1 Lactiplantibacillus modestisalitolerans strain NBRC 107235 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 141458 28 100.0 33 ............................ TCGTGGTTTTGAAGTTGAACTGCTTGGGGCTAG 141519 28 100.0 33 ............................ TTTCCGGCGCGCCGGTCAAATCGCCGCGGAAAT 141580 28 100.0 33 ............................ CTTACCTCCTTCTGCTTTGCCTGCATCATGTAG 141641 28 100.0 33 ............................ TCGGTTGGCCCGTGTTTAAGTTCATTGATACTG 141702 28 96.4 33 ..........................A. CGGCGATGGTTACGTATGGTTAAGATACAAGGC 141763 28 96.4 34 ........T................... CCACAAAATTACCGATTTGGAGTTGCTGCGGGTG 141825 28 96.4 0 .......................A.... | G [141842] ========== ====== ====== ====== ============================ ================================== ================== 7 28 98.5 33 GTATTCCCCGCGTATGCGGGGGTGATCC # Left flank : CGATGTTGCAGCGGCAACAATCCACGGCCATCTTGTCGGCGCGCAAAGTCATCGTGGAAGGGGCGGTCTCAATTACTGAGGAAGCCATTAAGCGAATCGAGCACGACACCGGGATGCGGTTGTCGGATGATAAGAAGTTGCAGCTGATCAACAATATGATGGTCACCATTATATCGGAGAAGGGCTCGCAGCCAGTAATCAGTACGTCGGATACGCAGTAGCGGCGCTGATTTAACGGCGATTATAGAATAAATAGTAATTTTGAAAGGCTCTCAAATGTGAGGGCCTTTTTAGTTTTACGTAATGTTTTGAAGTTGACCCTTAAAATCAGGTAATTTAAAGAATCGACTTCAGGTTGTTAGATTTTTTTCAGAATTCTAGTTATTTTAACTTAATAAAGCGGTTACTTTCGGTATAATAAGGATGTGGGTGCGGATCAACTTAATAAAAAACGCCAATATTGAAATATTAAAACGTTGATATTACGGGCTTTTTTTAGT # Right flank : CTGTGAAGACGATCACTGCGTAATCATCCTGATTTATTTTTAAAGTACCTCTAAGCGCCCGCGAGCCGTTTCATTCAGCTCGTCGCTAAATAAAAAACGATGACCCCATTAACGGTGGTCATCGTTTTTTGTGGTTGCGGTTCAGGTTCGAACCTATAAGTTTAAGTCCGTATCGTAATTTAATGGCGAAAAATCAGTACTCTTGGTAATTAAATCAGCAATTAAGCGCTGAAAAGCGGACAGGGCGAGTTCAGCCGCCTGGTCATTGGCTTTCGTCAGGGCCGCGGTGAGGGCGGCGCCCGTTAAGCCCGCAATGGCTTTGTCGGTTGTGATCAGGTGGTGCCCCAGTTGAATGGCAACCGCCTTTTGCACGGCCTGTAAATCCCCGTGCAACGCGTGATAGTGCGCGTCAACCAGCACACCAGCGTGTTTAAAGATCCAGTACGCCGAGGTGGGATCGTACTGCTTCGTTGCGACCTGGTAGGCGGCCGGCGTGTCAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 78400-77455 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJEA01000007.1 Lactiplantibacillus modestisalitolerans strain NBRC 107235 contig7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 78399 28 100.0 33 ............................ TGTCTCGAACTCGACTACAACACTCACACTTTC 78338 28 100.0 33 ............................ TCGAACTGACCGTCTAGGTCTTTCAGCATTGCC 78277 28 100.0 33 ............................ TTGTCATCGACCGGCCTAGCCACTGGTCTGCAA 78216 28 100.0 33 ............................ CGTGTTATATTGCGTTGTATAGTGTGATGGTTG 78155 28 100.0 33 ............................ TAAACGCCGCTGGGCAACTGCTGAATGGTGGCA 78094 28 100.0 33 ............................ CGGAATTAAGGGAGTAATTTCGGGCGTTGTAAA 78033 28 100.0 33 ............................ CCGGGGTCATTTTGTACGGCCAGCCTGCACTGG 77972 28 100.0 33 ............................ TGGGTAAAAGGACAATAAGGGCCGTAAAGTCTT 77911 28 100.0 33 ............................ CAACTGTCGTGAGCAAGCGACTAAGAAAGGCGC 77850 28 100.0 33 ............................ TCGCTTGCAAGTCCTTGTAGTTGTTCGCGTCTT 77789 28 100.0 33 ............................ CGTTAATCATGCCATCGCTGTCCCCGCTTGGAA 77728 28 100.0 32 ............................ TGATGGAAAAAGTTGAAAAAAATTGCGCAAAG 77668 28 92.9 34 .............G......A....... TCAAAAAATTCAGTATCTTCTAGGACACAAAACA 77606 28 92.9 33 ............C............G.. TTCAACCGTGATGTCGAGGCTGTCAGTCATGGA A [77584] 77544 28 82.1 34 .........A.A.........T.CG... AAAAATGGCGTCTACGCTTCACCCTTCTTCAAAA 77482 28 75.0 0 ..........TA.....A...AC...TT | ========== ====== ====== ====== ============================ ================================== ================== 16 28 96.4 33 GTATTCCCCGCGTATGCGGGGGTGATCC # Left flank : CTTAAGGACCAAATTATTGCGATTGGGGCGGTCAAACGCACGCTAACGGGTGAGATAGCAACGTTCGAACGGTTCATCAAACCGGCGCGGGTGGTACCACAGTCCATAACCGATTTAACTGGGATTACAACTGAACAGTTAAGAGAACGGGGCCTGGACTTGAAAGTAGCGTTAGAACAGCTCCAGACCTTTGTTGGTGACTACCCAATTGTAGGATATCATTTCGGGTTTGATGAGAATTTCTTGAGACAGGCGTGCCAGCAAAATGGGTTAGCCAGCTTAACAAATAAGATGGTGGATTTACAGCCAATTGTTCAACGCGTCGAACTTTTTCTGGATAATTACCGGTTAGCAACAGTTTTGAAAAAGTATGGAATTAAGAATCAACGGCCACATAATGCGTTGGCGGATGCGCAGGCAACGTGGCAGTTGGCGGACCACCTTATAAAAAACGGTGATTTCCGAATTTAAGAACGTTGATTTACCGGGATTTCTTTAGT # Right flank : ATTTATTCTAGTTAATCGTAAGGAGAAAAAATGGTAAAGAAAACCAGTGAGAAGGTTCAAGATTTACTTGATAGTACACTCACAGCCTATAGTATTGGTAAGAAATCTGGTGTTTCGCAGCCGTTAATTACAAGGCTTCGAACTGGCAGTAGAAAAGTTGGTGGAATAAAGTTAGAAACAGCGGAAAAATTGGTTGAATATTGGGAGAAGCATAAAGCAGATGCTTTCTTCAATATACGTAAGGACAATTTTAATTAGTACCAATGTTGATTCAATAAGGCGTAGATCCGGATGTAATGCTCACGATACAGTTAATATTTTTATTGTGTATATAGAGTTAATCGGATTCGGATTATGATGCTTTCCATATATGCGGGAGTAATCCTGAAGGAGAATTATGTTTAAAGAAAAAATCAAAATCATAGGTTTACGCACACTAATAGGTTTGATGTTGATTTGGCTTGGCTATGAGCTTATTCATCTGTTCAAGTTGATTTATA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 14429-13205 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJEA01000008.1 Lactiplantibacillus modestisalitolerans strain NBRC 107235 contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 14428 36 100.0 30 .................................... GCCGGTCGATATTGTTGTGCCTGATATGGT 14362 36 100.0 30 .................................... AAACAGATTTAACAGTGCTCAATCAGACCC 14296 36 100.0 30 .................................... AGTTACACCTTCCTTGTCATTTGTTTCACG 14230 36 100.0 30 .................................... TAACGCGACGATTCGCGCGGCGAATGCGGG 14164 36 100.0 30 .................................... AATTACGAGCCAATTAGATGCAAACTTTAA 14098 36 100.0 30 .................................... GTTGGCCCCGCCGCACCAGAATTGTCTTTA 14032 36 100.0 30 .................................... GGACGTGGACGAGTCAACACTAGACGAATT 13966 36 100.0 30 .................................... ATTATGTACAGAAATGTATCTTCTTCGACT 13900 36 100.0 30 .................................... ACCACCAGTGCCGAATACGAGGACGACGAT 13834 36 100.0 30 .................................... CAACGACCTTAAGCACCTTAGCCAACCCGA 13768 36 100.0 30 .................................... AAAAAACTAGCATGAGTATGACGTAGTGAA 13702 36 100.0 30 .................................... TCGCCGGTCATATCGTAATGACCCGCGCCG 13636 36 100.0 30 .................................... GGTGTTTAATGTCAATATCATCAAACCCGC 13570 36 100.0 30 .................................... TGTTTCGGCAAAAAACGAGCTGTCTGAGCT 13504 36 100.0 30 .................................... AGATATTATTCGCAGTGGCGCCGGTGATAC 13438 36 100.0 30 .................................... CTATCGAGTCTAATGCTGGGCTGGCACGGA 13372 36 100.0 30 .................................... AAAGGCATGACATAGCAGTGAAGGAGGGTA 13306 36 100.0 30 .................................... CACGGACACGGCTTAGATGGTCCAGACACT 13240 36 88.9 0 .............................T...CTA | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.4 30 GTTTTAGATAGAGGTCATTTTAAATAGGTCAAGAGC # Left flank : TCAGTAGATTTAAATAAGCTCTTTTTAAGAAAGATACAGCATCGAATTATTGATATAATGGCAGAGGAACAGAGAATTGATTTGATTGACCAAAGCAGAAAAATTATTTCACAGGTCTCGGATATTAGTTTTTTGATGGATTTACCTTTAGAAATTAGTGATTTGCCGAACATTGATCAGGTTATTAAATTTGCTGGAATTAGTTTTCCGTCAGATTTAAAGGCCCATCCAGAAATGATGTTAGAAACATTGATTCAAACTCATGTTGAGTTGGGATCAAAAAAGACTATTGTGTTAACGAACGTTAGCCACTATATCACGTTTCAACAGTTACAGAAGGTTAAGCAGGTTCTTCAAGAATTAAATGCAACTGTTATTCTTATTGAATACTCAGAATGTAGTCGTAAAGATAAATTCAATGTTCCTTGTTATTATTACGTTGATGAGGATTTGGTTGACTGGCGGTCATGATATTATGATAAATCAATGTGGAAAAGGTG # Right flank : TATTATCCAAAAAATAGGTCGAGCAACAATTACCAATACTGGTATTTGTTGCTCGACCTTGTTTCTTATGGTTTAGTTTAGGACGGTTTCCTTACTAAAACGAAAACGTAAGAACTTGCCAATTTCGGTAACCACCAAAACAATGATCCCACAAATGATTGGAATGCCCCAACCGTACCAGAAGTTGATGCTGGTCGTGTGGAAGACCGATTGCATGAATGGCAAGTAGATGATTCCTAATTGTAACAGGATCAAAATGCCAATGATGTAAAAGGCCATCTTGTTTTGGAAGAAGTACTTGGAAATGACCGGGTGATCGTTTCGCAAGTTGAACAGGTAGAAAATCTTACCAAAAATAATGATGTTGAGCGACATCGTACTCCCAATCACGTTTGGTAAGCCGATAGCGGTCAAGTAGTCGTAAGCAAAGATTCCGAGTCCTGAAATCAGGAGTGAAACGTAAATAATCTCAAAGGTGTCCAGTTTATTTAAGAGCCCCG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATAGAGGTCATTTTAAATAGGTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //