Array 1 135515-134816 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJESY010000003.1 Staphylococcus pseudintermedius isolate 18S03474-1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	====================================	========================================	==================
    135514	    36	 100.0	    38	....................................	CTATTTCTTTATTCATTTTAATCAATTCCTTTTCTGTT  	
    135440	    36	 100.0	    36	....................................	AACCGCTTCTTTGTATTCCTCAAATGAGAAGTTTTC    	
    135368	    36	 100.0	    38	....................................	GCTATTTTCTTTGTCATAATTATCAATTCCTTTCTTAT  	
    135294	    36	 100.0	    35	....................................	ATCTTGAGTGATGTAGCTTGTAATTAAAGGCATCT     	
    135223	    36	 100.0	    38	....................................	GATTGCTTATGGAATTCTATATGAAGCATCGTATAGAA  	
    135149	    36	  97.2	    39	.................................T..	TCTAATGTCTGAAACTTTATGGCTCGAATCGTCTCCTCT 	
    135074	    36	 100.0	    40	....................................	GGCTCAACTGATTGCGGATATTTAACTAAGTGCGATTTAT	
    134998	    36	 100.0	    39	....................................	CCTGTATCATCATAGGAATAACGTTTATCTTTTTTTGCA 	
    134923	    36	  97.2	    36	....T...............................	TTCTAATTCGTTTTGCGATATTTCTCAAGAATTCCA    	
    134851	    36	  94.4	     0	............C................T......	|                                       	
==========	======	======	======	====================================	========================================	==================
        10	    36	  98.9	    38	AATCGAATAGAGACCCCGATATTAGGGGACGAGAAC	                                        	       

# Left flank :   GTGAAAACTGGAGATGAAGTCAAATGTGTAACGTATAGTTGAAAGGTGGTAATACAGCGGTTTTGGCAATTTAATAGGCGATGGAAATGTCAAGGCACAATGCATATTCCGATTAATTTTTTAAATACGAAGAAGTTAGGAATAAGCAAATATTGAAGTTTGCACAGCTACAGTATATTCGGCCAGATGTTAATTATTAAAAAGAAAGTTCCAGTATTCAAAGGAAGAGTAGAAAATGTATGATAATTATCATTAACAAGACTTCGTTTAATTGAAAGCGTTTAAAAAATATAGAAGAAAGTAATCATGTGAATAGGATATGAATTAAGAAAGGTTTATTGTATAATATCTATGATATGTTTTGAAATATTTATAGTTGGTTGAAACTGAAATGTCTAAAAATTGGACAATAGTGGTATTTTTAATATTAAATTTGTCTTATTTCTAGACATGATCAAAGTATAGTTATCCTCGTTATCAAGGTGTTTCTACAGCTGACT
# Right flank :  AGAACTTTCAATGTGAGTTGTGACCAATGAAGCATTTAAAAATGATGAGAGATATAGAAGTTATGAAGGCAACGTTTTGAAAATTACAAATAATTCACAATTCTGTTGTTGTAAACAAATAAATGTTGTAAAATTAAATTAACATTTTAAGCGATAAAATGGGGTCTTATACTTTTTTGGTGAATGTTTGTATTTTTGCATATATTTTAGTCATAGTTATTTAAAGTGTAAGTATTAGTGCTTTTGATTAAAATTTTGAAGAAATAATAAGTGATTAAAAGATGTTGAGATTGAATATACTACTGTATTGATACAATGACTCACTGAATAGTACCCTTGTTTTTATCTAGGGAGGTGTAAAAATGAAAGATATCATTTACGTTGAGAACCATCATTTTGTCAGTGTTAAAGGGGAAAGTATCAAGTTTAAAAATATTATTGATAAATCAGAGCAATATTTTTTAGTAGATGATATCGAAGCACTGATATTTGATAGTCAT

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCGAATAGAGACCCCGATATTAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.00,-7.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//