Array 1 33772-31954 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJUH01000009.1 Lacticaseibacillus casei strain NBRC 101979 sequence009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33771 36 100.0 30 .................................... GCTGTCAAAAGCGCTCAATGACAAGCGTAT 33705 36 100.0 30 .................................... TCGCTTCTGGGTTGTCTAGCTTGTACTTAT 33639 36 100.0 30 .................................... AACGGATTCCACCAACCTTGGCACCAAAAG 33573 36 100.0 30 .................................... ACAATTGCGATAATCAACAAAACGATTGCC 33507 36 100.0 30 .................................... GTTAGAGACGGCTGAGTCAGAATATTATGG 33441 36 100.0 30 .................................... CAACCTTACAGAAGTTCTTCAAGAGCGGTT 33375 36 100.0 30 .................................... GGACGAGCAAATCTAACCGCTTCGGGCCAA 33309 36 100.0 30 .................................... CCGAAGGATAAGCCAATATTTGTACCAGAC 33243 36 100.0 30 .................................... GACTTCGAATGCTGAAGAACTAGCTGATCA 33177 36 100.0 30 .................................... GGGGCACCTCGATATACGGGTACCCCATCT 33111 36 100.0 30 .................................... CGAATTTAAGACGATGAAACTGCCGTATGG 33045 36 100.0 30 .................................... AGAGTTTATTCAGCATGATAGTACCAAATT 32979 36 100.0 30 .................................... TCAAATAGCCTCTTCGAAAGTTAAAGGAGG 32913 36 100.0 30 .................................... AGCGTGGCGTAGCGCTAACTTGTCATTTTT 32847 36 100.0 30 .................................... AAAAATTGGGGATTGGCAAGATTACGACTG 32781 36 100.0 30 .................................... TATTTCGCACTTCCAAAATCATAGCCATCA 32715 36 100.0 30 .................................... CGCCTGAACATTGCATCGATGGTTTGATCA 32649 36 100.0 30 .................................... GTTGGTGGCAGCGATTCATTGCTGACGTCC 32583 36 100.0 30 .................................... AACAATTGAAGCGGTGGAAGCTATAGCCGC 32517 36 100.0 30 .................................... ACGTCGCCGCGAATTTTCCGCATTACCGTA 32451 36 100.0 30 .................................... TCGACAATTGTGACACGGGTTTCAACGTCA 32385 36 100.0 30 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCGC 32319 36 100.0 30 .................................... AAGGGTTAGCGCCACTTAATCCTGACAACT 32253 36 97.2 30 ................................A... AAAGGCTTACGTTCAGGCGATTGAATCCGG 32187 36 100.0 30 .................................... ACCCAGTTTCCTCGTTGCGCAGATGTTTGT 32121 36 100.0 30 .................................... CCGAGAAGGTCGGACGATCAACTACTTTCG 32055 36 100.0 30 .................................... AGGAAATTCGAGTTCTTCCCGCAATTGATG 31989 36 83.3 0 C.............C..............G..TTC. | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.3 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGTGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAATCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGTGAACTAGATTGATTAGGAGATTGTGTGAAAACAACG # Right flank : AAACAGCAGTGAGACTAAACTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGCGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGCACGACTAGCCAGACGAGCAATGCTAAGGTGAAGATTAATACCGGCGCCGATGCGAGTGCCAAGGTGCCGGCAGCCGGCACCTTAGTGATGCGTCAGCTTTATGCTGCACCACACGGCAAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //