Array 1 1390367-1388681 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT984417.1 Latilactobacillus fuchuensis strain MFPC41A2801 chromosome I, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1390366 36 100.0 30 .................................... AAAGTTACAATGTCAGGCATCAACTTTTTA 1390300 36 100.0 30 .................................... ACAAAAATCAGCAGTTCATCGAAGCAGAGA 1390234 36 100.0 30 .................................... ACTTGTCTGGGTAAATTCCTGCAATTTGTT 1390168 36 100.0 30 .................................... TCAAAACAATGGTAAACTAAGTAAAGGTTT 1390102 36 100.0 30 .................................... GGGTTAATGCTTGGGCTTCTTCTGCGCCAA 1390036 36 100.0 30 .................................... GCATATCATGTCGTTGGTTTGGGTTGCCAG 1389970 36 100.0 30 .................................... TTAATGGAACTAGCAAAAACTAATAGTATT 1389904 36 100.0 30 .................................... AAAACTATTAATAACTAAATTATAACACAA 1389838 36 100.0 30 .................................... ATTAACAAACAGTAAGCCATTAAGCGCAAA 1389772 36 100.0 30 .................................... AGCATTAATTAAATACTTTAATATGTGGCA 1389706 36 100.0 30 .................................... TTTTTTCGATAAAACATTCGACTATGCCCA 1389640 36 100.0 30 .................................... AAATGTTACAAGGGTTAAATAACGTTAGTG 1389574 36 100.0 30 .................................... CGTCCAATGTGTCTGGCGTGGCAATGAAAT 1389508 36 100.0 30 .................................... AACGATATAGTCATAAAGACATTAGCGGTA 1389442 36 100.0 30 .................................... GACAAGTCTGACAAGATTCGCTACATCACA 1389376 36 100.0 30 .................................... TTTCTGCTAAACTCTTTAGCAGCTGCTTGG 1389310 36 100.0 30 .................................... GGTTCGTGGGTGGCATGGTGAGCGATTTAA 1389244 36 100.0 30 .................................... GAGACGCTTATAACTTTCTTGGCATAAGCA 1389178 36 100.0 30 .................................... CTGTTAATCATTACTATTCCCCCTAATATG 1389112 36 100.0 30 .................................... TCACGTATGCGCGCACTGGGACAACGACTT 1389046 36 100.0 30 .................................... ACCCCAGTCGGTCTACGGATTCGAACCCTA 1388980 36 100.0 30 .................................... TCTGGTTGAAGAGAAGAGTAACAACACTCC 1388914 36 100.0 30 .................................... TGGGCACTTAAAGTAATGGTTAGTAATCCA 1388848 36 100.0 30 .................................... CAACACTATGTGGAAATGATTAAGCAGGTT 1388782 36 100.0 30 .................................... ATACGTTCAATAACTCTACATTCATCAGAG 1388716 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Left flank : ACGCTAGATCCAAATAAATTATTTCAAAGTCGGCTGATTAAAAAAATGGCGAAAGACCTAACGGATGATCAGCGTCAGAATTTAGTTGGACTTGACAGTCAGATGCGGGCTGCTATTTTAGAGGCTGCTTTTATGTATGATTTGGCGTTAGATATTGATTTAGAATGGGATGTTCAGAAAGCGTTGAAATACTTTAATTTAAAGTTTTCAAACGATATTCAAACCAATCCCTATGGTATAATGGAGAGTATAGTAGCAACAGCTTCAGAATTAAATGAAACTAAAATTATTGTGTTAATGAACGTTTCCCATTACCTTAGTATCAGCCAATTTAATGAATTGGTAAGGTTGATGGCGACGTTGAATGTGAAACTCTTTATCATCGAATTTTCAGAAACTTCAAACCCGACTAGGTACCAAGAATGCCGGTATTATCATATCGACACCGATTATGTCGAGTGGCGTTATGATTCAGATGAAGGAATGATGAAAAAATAACG # Right flank : TCAATCGCACTAATAACCCTATGCTCCTATCCTAGTATTTGGTACATAAATTTCTGAACAGTTGTGCCATAATTAATAAAACAAGATAGGAGCATTCCAATGAAACGATATCAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTACACGAAGACATCGTTAAGATGTTTATTTTTTTGCGAAAAGACAAAAAAGGTGTCGGTAGAATATTTCTACCAACACCAGAAAGTATAGACCCGTTTTTGGATAATGTTATTTTTAATTTAGACGGAGATTGATGAGTGAGGTCGCGCGATGAAGCGTGGTTGCTCTTAACCGACAGCGCCATTTTTTATTAACCGCAGAAGGCTATTCAAAGGAGCACGTTTAATCAGGAGTCGATTGATGAGTGAAATCGCGCGATGAATTGACTAGCCCACGCCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1459088-1456277 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT984417.1 Latilactobacillus fuchuensis strain MFPC41A2801 chromosome I, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1459087 36 100.0 30 .................................... TGATTAGATGGTATATTAATCTGTTCAACA 1459021 36 100.0 30 .................................... TTAAAGTTTCCTTTAAGCTATCATAGTGTT 1458955 36 100.0 30 .................................... CGTCTGCTGCTACAGTTCACGCTTTCTGGT 1458889 36 100.0 30 .................................... ACTATATAACGGAGGTGGCCAGCCTTGAAT 1458823 36 100.0 30 .................................... AGGCAACTGTACCTTTAGTTAACATTCTAG 1458757 36 100.0 30 .................................... CGTGAATACAGATGGGACGAGAGTTCACTA 1458691 36 100.0 30 .................................... GTAGTACAGGCAACACAAGACTGGAATGGA 1458625 36 100.0 30 .................................... GATATTCCTAAAGAAAACCCAGCAATTGGA 1458559 36 100.0 30 .................................... GCGGTCATAATCTTTGATGTCAAAAGTTAA 1458493 36 100.0 30 .................................... GATTAAAACTTCCTTTCCTTAACTTATGTA 1458427 36 100.0 30 .................................... AAGAGGTTCTGCATGAGGCGCTACATAAGT 1458361 36 100.0 30 .................................... AATCCATTACGTACAAACAGTGTTAATGTA 1458295 36 100.0 30 .................................... AGTCAACTATACAAACAGGCGGGCAACAGT 1458229 36 100.0 30 .................................... CATCGTGTAGTTCTGTTTGGCGAATCCTTG 1458163 36 100.0 31 .................................... TGATTGTAGTTTTCAAAGAGTCAACGTTTGA 1458096 36 100.0 30 .................................... GCGAATCAAATGAAGTATATATCAATGGAC 1458030 36 100.0 30 .................................... GCGAGCATTGGGCGATTGCTGACGATGTAT 1457964 36 100.0 30 .................................... ATTCCAACCACCGTTAAGATTACGTAAACT 1457898 36 100.0 30 .................................... TAATTCAAGCGAAACGGGATATAGTGTTGC 1457832 36 100.0 30 .................................... GTTACTAATATTTTAGGGGCTGTGGAAGCA 1457766 36 100.0 30 .................................... CGGGCCGAATTGCTTTAGGTATGAATGTTG 1457700 36 100.0 30 .................................... TTGGGTTGTTAGCTTCGATATTGAAGGGTT 1457634 36 100.0 30 .................................... AACTATTTACTTGAATTTGAAGAATAAATA 1457568 36 100.0 30 .................................... TTGAGCGAGCAGGTCTTGCGGATAATCAAT 1457502 36 100.0 30 .................................... TGCACGTGTTTCAAAAGAATTTATCGATTC 1457436 36 100.0 30 .................................... GGGATTATCCGCATTACAACGAATACATCA 1457370 36 100.0 30 .................................... ATGATGGGCAGTTTTACAGTCCTAAAGGTG 1457304 36 100.0 30 .................................... TAAAGGCTACAAGCAAGGCTGGGTTTACTT 1457238 36 100.0 30 .................................... GGGAAGGGATATGACTATGACAAACGAACA 1457172 36 100.0 30 .................................... GTGTATTGGTTGTGTTCTTTAACTACTTTC 1457106 36 100.0 30 .................................... TGCAACGCTACGGGCTTGCCTAGGTCACTT 1457040 36 100.0 30 .................................... TTATTTGTAGGATATTCAATCGGACTACAT 1456974 36 100.0 30 .................................... TTAGAATAATTGCTACCGAGCCACGGCTTA 1456908 36 100.0 30 .................................... CTGGCTAAATTTACATAACCGTTGCTGGCA 1456842 36 100.0 31 .................................... CCCGTAGCTTGATTAACAAATGATTCAGGCA 1456775 36 100.0 30 .................................... CAACCAACTGCCATTGATGCTGCGTAACGC 1456709 36 100.0 30 .................................... AGGACTGGTGAGACGTTAATAGCATCATTT 1456643 36 100.0 30 .................................... TCCCGGCTAGGATATTGGTCCGAGAAGCTA 1456577 36 100.0 30 .................................... CCGCAGATGACGATCAGGATTATTCTTATG 1456511 36 100.0 30 .................................... CGAAAAAGGAAATAAGGCGACTGATTGGTC 1456445 36 100.0 30 .................................... TATTCGTTTCAGCCAATGGGGGCACACTAT 1456379 36 100.0 30 .................................... TAAGATCGATAAGTGTACCCCTTTAGCGCT 1456313 36 75.0 0 ...............G....T.....T..TCGG.TT | G [1456281] ========== ====== ====== ====== ==================================== =============================== ================== 43 36 99.4 30 GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Left flank : TCTTTAATAATATTTGTTGGTGCAGGAGTATCAGCAAATTCGGGGTTGCCTAAGTGGAGTGAACTTATAAGTGAATTTAAAAATGAGATTGATTTGACTGATGAAACGGATTATTTAAAGACGGCTCAATATTATTACGATACTGTTGGACAACAAAAATATTTTCAGAAAATAATGGATATTTTTCAACCACATATAAAGGTGAATTTTATAATGAAGTTAGCCACCGCTAACTAAAAAACGCCACGTGAATTTCATGTTATATTGAAGTTACCACTAACTTTCAATAGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAATCCGAACCTCAAATTACATCAGTTGGTTTAATTCCGACAGAATTAGAACGAGTGTTTAGAAAAAGATGTGCCATTTATTGACATAGGAGCAATTGCGCGGG # Right flank : TTTTATGAGTATGAGTTTCAGAGAGTTAGCTAATTCATCGGCTAGCTCTTTTTTCTTACTATTGAAAAGCGTTCTCATTTAGCTTAAAATGAAAAGTGTATAAATGCGCGATTATGCGCTCATGGAGGGTCATCAATGTCTAAATTAGAAATCATCGATTTACACGTCGGTATCGAAGGTAAAGAGATTTTAAAAGGTGTTAACTTAGAAATGAGTACGGGCGAAATTCACGCCATTATGGGGCCGAACGGGACTGGTAAATCAACGTTATCAGAAACCATTATGGGTAATCCTAAATATGAAGTCCTGCAAGGACAAATTAAATTAGATGGTCAAAATATTCTAGAAATGCCGGTCGATGAACGGGCACGCGCTGGTCTTTTCTTGGCGATGCAATACCCTGCTGAAATTCAAGGCGTTACGAATGCTGAATTTATGCGTGCTGCGATTAATGCCCGCCGTCCTGAAGATGATCAAATCTCAGTCATGGCCTTTTTGAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTCATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //