Array 1 7648-7028 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOSF01000057.1 Succinivibrio dextrinosolvens strain 22B, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 7647 35 100.0 40 ................................... GTAATCTTTACAGGTAAACTAACAGTTTTACCTGCTTTGG 7572 35 100.0 35 ................................... TATTCGCAGTATCCTCAATACGGTTGATGCGTAAA 7502 35 100.0 41 ................................... TCATATTTCCCCTCCTTGGTTAATGGGAAGCTAGGCAGTAG 7426 35 100.0 40 ................................... TCTTACATAAACTGGAAGCATGATACATTTCTCATCGTAT 7351 35 100.0 38 ................................... CTGAATCCTCAAGGAAACGCTCATATTCCTCTTTAGTT 7278 35 100.0 36 ................................... CTTATCATCAAGTTCCTTATTTAACTCTGTTAAAAG 7207 35 100.0 36 ................................... TTTTGACCTTTGGCAACAAATAGAGCCGAGTTTTGG 7136 35 100.0 39 ................................... AGAGTGAGGATTAAGACGTCCTCATCTTCTTTATCTCGT 7062 35 82.9 0 ...............T...........C..TTTC. | ========== ====== ====== ====== =================================== ========================================= ================== 9 35 98.1 38 GTTCTAAAACCTTTTCCCCGTAAGGGGACGAAAAC # Left flank : GCAGTTTGTTAGTTGGTTAAAGTAGGTGGACCATTACAGGCTGCTACTATCTAGAACTTGTCTTATTAGTAGCTGATGTTAACTCTATGTAGTAACAGTATTTGGTCTGTTGTTTTCTTCTTTTAACAAGATAAAAAAAAATGACTTTTTGTCTTAAGCATACTTCTTTGATTTAAGAATAAAATCAAATTTCGTGAAAAGTCTCTGCTTTTGATTCGGAAATGACATATACTACAAATCATATCCAAACAGACTTCAGTATTTAGTAATGATTAACTTGTTGGTTTATTGTTAGGTTTTTACTAAATTCTGCCGAGTCTTTCTTTAAAAATTCGATGTATTGATTTATAAGGAAATTTTCTAAATCATTCGGAACCGTTGGTATATAAGGCTTTGCTTATGTTTTACCCAAGATTTATAGAGTCAAATAGTTCAAAATTTGTGAGACTCGGTAAAATGGTATTTTCAGCCCTTATGTATCAAGGCCTTTGGAAGGTGCA # Right flank : CTTTAGAGAAACTCCAAAATGAATCAACTTCGAATTTTTTAAGATGTGCAAATTTACTGAATAGATGATGCTCTTGAGTATGCAATGAGCTCCATTAGAAAGGGGAGGATTGATTCTCCTTTATGATGGTCTTTTCTGAAATGAAGGATTGGTATCGTTAAATAGGCGTTATGCCAATTAAGGTCTAAAAGATTTAACCTTCCGCCTGTTGTATTGTTTTTTGTTTTCTTTCAATTACTCTCAATCTGTAAGCTCCCATGCCTATACTGGTTTTGATGCCAATACCTGAATACTCTCCAAAAGTAAGAAGCATATTTAAAAAGTTCTTCATGGTGGAGTTACTTCTGCAGCTTATAGTGACTGATCCAATAAAACTGTTTATTCTGATACCTTCAAGATGAAAGGCTGTACTTCTTAGTTTATAGGATGAAATGTAGCAGCGTTCATAAAGCTGATTTAAGGTGTCTTCATCACTGATTATTTCATCCTGAAATGCCGCC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAAAACCTTTTCCCCGTAAGGGGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 640-385 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOSF01000085.1 Succinivibrio dextrinosolvens strain 22B, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 639 35 100.0 37 ................................... TTTAATACAACATCAAAACCATGTTCTGATTTTTTTA 567 35 100.0 38 ................................... TTAGAAGTACAAATCCTTGAGCAATTTTGAATCAAATC 494 35 100.0 40 ................................... TCAAGTTTGCCTAAGGTTGGCATCTCGTCAATCATGCAGA 419 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 4 35 100.0 39 GTTTTATTTTTATTTCCCCGTTAGGGGACGAGAAC # Left flank : TAGCAAAACGTTTTATTCGACATTTTGAACCAAGATACAGTTTTGATCCTAATGAGACTGTTGGCTGGCTCGGCAGCTGTGGTTTTGCATCGAAGACGATTATTCAAAGCTTTTTTGAGGATTCAAAAGAAGATTCTGCACTGGATCTAACTGATGCTGTTTTTTATATTACTTTGGATAAGTTATACACAACCCATAAGCATGATCTTGATGCAGGTAAATATAATGTTGCGCCTCATATGAGAAAGCAGACTGTATCAGATAACACAAGGTATGATTTTGGTAAGGTAAAGATTGATTTTGCCTAAATTACCGAATGACTACTAAAAAAACAGAGGCCTTGATTTATAAAGAAAAAGTATAAATCATTCGGAACCGTTGGTATATAAGGTCTAAAACGCTATTTACAGATGTTTTATTAAGTTAAAAAGTATAAAATTTAGGAGACTCGGTAAAACAGCGTTTTCTGGCCTTATATATCAAGGAGTTACAAAGGTGCG # Right flank : CACTATGCAAGAGCGCACAGGCAGCTATACGAGTAACTAGTGTATCGTCTCAATCATATTTTTAGTTAACCTGCAGATCAACTCTGCAGGAGCTCTTTCAAAACTTGACCTATTTATTGTCATAATCATATTAAAATAACACTAAATAGACTAAATATTTATTGACAAATTAAATACTTATGCTAAACTATATTTAGTTTATTTAGCATAAGGATTTTAATATGACCATTACAAAATCATATAACAAGCACACCAATACTTGGTATGTCTATGATACTACTTACGTCTTTGATGAAACTAAAAATAAGAAAGTTCAAAAAAGAAAATGTATCGGAAAGTATGATCCGGTAACTGATAGCATTATTGAAACTGGGAGCAGAGGAAG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTTTATTTCCCCGTTAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 9618-9926 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOSF01000085.1 Succinivibrio dextrinosolvens strain 22B, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ============================================== ================== 9618 27 100.0 43 ........................... CTGGTATGGTTTACATTTATGTTTGGAGCCTGTCAGTTTTCGT 9688 27 100.0 42 ........................... GAAAGACGTTTTTACTATTGTGACTGCCGAAGAGTTTTCGTC 9757 27 100.0 46 ........................... AGAGAGCAGATCGCAGCGGAATGGCAGAACGCTTTTAAGTTTTCGT 9830 27 96.3 43 ....C...................... TAAAGCATAATCGCACAGTTGCCTTCCTGCTTTAGGTTTTCGT 9900 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ============================================== ================== 5 27 99.3 44 CCCCTTACGGGGAAAAGGTTTTAGAAC # Left flank : AGGTAACGATCTTTTTGGCGAAGTTCAAAGAAAACTCTGTATTAAAGAGTTCGCACTGAGCTCTCTGGAGGCTTGTTTTATTTGTAGTTACCCCTCTGTATCCTCCGAGATATTTACCATTTTGGGTTATATAAAGGATTGGAATGTTTTTTGTCAGACACTGTTTGATCAGATAAGTTGTAACGGTTGAATTACTCATTAAGGTGATGCTTTCGAGTGATTCAGAAGGAAATGTTGTTAATTCCTCATCATGTAGTTTTACGTAGATTCTTCCTTTCTCGGTTCCAACAACAGAACCATTCTCTGTAACAACCAAATCACACATATCTGTTACTCCCTTTTTTTCTTGATAGCTAGGGAATAGCAACAGGTGTGCCAACGCTGTTAACTCTAAGATTTTTCCTTATTTTATAAAAGGTTATTTATTCATGAGTTTCTGATGTATTTATGAAAAATCATAATAAGTTAGTACAAATCATAGAAAATTATATGCAAAACGT # Right flank : AGTATTTTTATAATGGAAAATACATATCGTAT # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCTTACGGGGAAAAGGTTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //