Array 1 24334-23045 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYBS01000002.1 Streptococcus mutans strain UAB-28 NODE_2_length_349812_cov_20.9415, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 24333 36 100.0 30 .................................... AAAACGCAGAATTTAAAAAAGCTATGAATT 24267 36 100.0 30 .................................... GTGAGAGTAGCTGTAGCTGGTGCAATGTGA 24201 36 100.0 30 .................................... GTGCTAGATGCCACCGCTTGAAAACAGACT 24135 36 100.0 30 .................................... TTTTTAATAACGCTTTTTTATGGAAAAGAA 24069 36 100.0 30 .................................... GTGCTAGATGCCACCGCTTGAAAACAGACT 24003 36 100.0 30 .................................... ATCGCCAAGAGCCGCGAAGAACTGGAAGAC 23937 36 100.0 30 .................................... GAAGGATGAGGTAAAAGTCATGGGAGTATT 23871 36 100.0 30 .................................... CGACGACTTCATCAAACGTGTCGCGATTAA 23805 36 100.0 30 .................................... GTCGCTTACGAAAAAAAAGAAATGAAGGCT 23739 36 100.0 30 .................................... TTTATTCGTGATGGATACAAGCGTGCTCTA 23673 36 100.0 30 .................................... TGTGCTAAATGTCACCGTTTAAAAACAGAT 23607 36 100.0 30 .................................... GAACGAAACAAACTTTACCATTCAGCTAGA 23541 36 100.0 30 .................................... GCTCGATCGAACCTTCTAAGTTAGTTAGAT 23475 36 100.0 30 .................................... CTATCACTGACAAAACTAAAACTTTGAAAA 23409 36 100.0 29 .................................... GGGCAGTTAATAAACCGGAACTACGACTA 23344 36 100.0 30 .................................... ATGAATTAGTATTTATTCCTATTATAAATA 23278 36 100.0 30 .................................... TGAGGTGTTGCACCACCAGCTGTATATCCA 23212 36 100.0 30 .................................... TAACTACATTTGGAACCTTTTGACATTAAA 23146 36 100.0 30 .................................... ACTAGCAACACAGCACCTTTCAGCGCAAGT 23080 35 75.0 0 ..........CA.......A.TG..T-.A.T..... | A [23065] ========== ====== ====== ====== ==================================== ============================== ================== 20 36 98.8 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAAGCGCTAGAAAGATTGATTTCTAGCGCTTTTTTAGGTATAATATAATTAATTAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATGAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : GCATTATGCGAAAGAGTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGATTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTATTGACGTCCAAAGGTTTGATACAAATCCTTAGCTTTTATCACATTATCCCAATGAATAATT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //