Array 1 396707-396938 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL397254.1 Streptococcus sp. oral taxon 071 str. 73H25AP SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================ ================== 396707 37 100.0 28 ..................................... AAGTGTCAGCAGAGACATCAAGAGCCTT 396772 37 100.0 28 ..................................... CTTTAGACTCATATATTGGCTTATCTCC 396837 37 94.6 28 ...............T...................G. CTATCTGCTTTCTTTGCTGCAATTGGTC 396902 37 94.6 0 .A.............T..................... | ========== ====== ====== ====== ===================================== ============================ ================== 4 37 97.3 28 AGGTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Left flank : CCACCTTAACGAACACATCAAACAACATAAAAAAGACCACGCTACTTACCGTGGATTGATGAAGAAAATCGGTCGCCGTCGTAACTTGCTTGCATACTTGCGTAAGAACGACGTTAACCGTTACCGTGAGTTGATCAACTCTCTAGGACTTCGTCGTTAATCTGCTTTATTTTCCACTTACATTGCGTTGTCACCTTACCTCGATATACTCAAGTATTATCTTCGGTTACGGTTCCTAGAACTGTAAGGTAAAATAAACCAGATCATCTCCCTTCGGGGAGATTTTTTATTTTCACTAGTTTTATAGTACAATCTTCGGCTTGTCGCTTAGTCTATAAACGTTTTATCCAGCAAGAATCATGATGCTAAGGGCGTTAAAAATCCGTATGAAAATAGGGAAAGGAAACAGTGTTCGATGAACACAAGGAGTTTCATCTTTTTCACTAGGATTTTAGCCCGAGCTCAAATCAGCTCTCTGACTTCAGAGAGCTTTTTTATTG # Right flank : CCTCAAATGGTATCAGCTAATGACACCATGAAGGTGCGCAGTTACTCGGCTTTTCAAGCCGAGTAACTGTCTGCAAGCCCCCTCGGAGAGCCCACACTTTACGAAGTAAAGTATAGTATGTTATACTCTACATGGAAGTAGTCACCGAATTCCAGTTAGAAATTACTTTGTAACTACGTTTTGAGGAGGAGTAAAATGCTTTCCTACGTTCGACATTACCCACTAGCGATAGCTAAATTAATGTGTCTGTGCTCTCCTAAAATCTGCTGATTTATTACTAACTAATACAGGAGGTTTTTATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCCACCAGTATCGATTATTTAATTATTTTAATTATTTTATTTGCACAGCTATCACAGAATAAACAGAAATGGCATATTTATGCGGGGCAATATCTAGGAACAGGCTTACTTGTAGGGGCGAGTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAA # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 1909414-1907728 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL397254.1 Streptococcus sp. oral taxon 071 str. 73H25AP SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1909413 36 100.0 30 .................................... ACAGCTGAGACAGAGAGAACTGGTAAATCT 1909347 36 100.0 30 .................................... TTCGGTTTTATACCAGTCATGACCATCGTT 1909281 36 100.0 30 .................................... AAGGTCTTGCGTCTTAAACTTCATGCTCAT 1909215 36 100.0 30 .................................... TATAGTTGCAATCAAATAACCTTCCCTTAT 1909149 36 100.0 30 .................................... TGTAGGTTCAACAGTTGAACACCCTGCATT 1909083 36 100.0 30 .................................... TACCCCAATGGTGATTATCCAAAAGAGGAG 1909017 36 100.0 30 .................................... AGAATCTCTTTCAGTAATATTAATACCTGC 1908951 36 100.0 30 .................................... TAACGAGATCAAATCACGTGCATTGGAAGA 1908885 36 100.0 30 .................................... TCAGATACAAGAGGGGTTAAGGTCGTATAT 1908819 36 100.0 30 .................................... TTGAAAGTGTATCCTTCAGATGCTTGCATC 1908753 36 100.0 30 .................................... GAAAAGTCAGTTGGTTAGAATGACCCGCAT 1908687 36 100.0 30 .................................... GTGAAAGGTACATATTAACAATCTGATTGA 1908621 36 100.0 30 .................................... AGGGCAAGCGTGCAAGTAAGCAGATAAAAG 1908555 36 100.0 30 .................................... TTGAACGAATACAATGTAGTCAGCTACTTT 1908489 36 100.0 30 .................................... ATCTTCTGATGTGGAGATTATGACTTATAT 1908423 36 100.0 30 .................................... CGAACTGAACATTAGCATTGACATCGGCTT 1908357 36 100.0 30 .................................... CGAGGAACAGGGGTCGACATTGTCAAAGCA 1908291 36 100.0 30 .................................... CAGCCAGATTGAGTCCTTCAAAACTCATTA 1908225 36 100.0 30 .................................... ACATTTCAAGTATGGTTTTAACGATGTAAC 1908159 36 100.0 30 .................................... ACATTTCAAGTATGGTTTTAACGATGTAAC 1908093 36 100.0 30 .................................... AACAGAATATTGACGGGAACGCTGATTTCT 1908027 36 100.0 30 .................................... GAAACTCTTCTTCGAGCAAACCTACCCAGA 1907961 36 100.0 30 .................................... TCAGTCTGAGAAGAAAATGAGGGAGCTGGT 1907895 36 100.0 30 .................................... AATAGAGATGATGTTCAGCTTATGATTGAA 1907829 36 100.0 30 .................................... CAGAGAATGGAAATCTTCATCTTTACCATT 1907763 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTCAAGTCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTACTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACCCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCGATCGCCTATCTATCAAAGGATGAGTTGGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGATGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTAACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AAGCTACTCATTTTTTGAGTAGCTTTTTAACTATTCCATCCCTACACATAGCTCATTCCCTTATAGCAAAGGAAAATGGCTAGTGCGATAAAAAGTACAGTTGCTCCGATTCGCTGGCTGGTACTATACATCCTTTTTTCCCATTTGACTGGAAAGATGATCGCTAGAAAAGCCCCGCCTACTGCGCCACCAATATGCCCTGCTAGGCTGATTCCTGGGATCAGAACACTTCCAATGATATTTATCACGAAAAGTGTCAGATAGGATTGCCCCAACTGCTGAATATAGGGGTTGCGAGTTGCGTAACGCAAGACGATGATCGCAGCAAATAGTCCGTAAAGAGAAGTGGAGGCCCCTGCTGCTACAACTTTCGGTGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCTGATAAGAGATAAAGAAGGAAAAATTGCTTAGAGCCGAAAATCTCCTCCACCTGTTGTCCAAGAAAGTAGAGTGAAATCATATTGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //