Array 1 56847-57174 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLUI01000049.1 Providencia alcalifaciens strain wls1920 637, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 56847 28 100.0 32 ............................ AGTGCAAAGATAACCACAGGTTTAAATATTTC 56907 28 100.0 32 ............................ CTAACAGTTAAGAGCCAAGAAAGCCCACACAC 56967 28 100.0 32 ............................ TACAGGCGATAGTGAGCCAGATAAACCAAATC 57027 28 100.0 32 ............................ TTGTGTTTATGGATAAACATTGCCGCCTTGAT 57087 28 96.4 32 ..........G................. GAAACAGTTTTAGGAAGTGACGCAAAAGTCAC 57147 28 85.7 0 .......A..GC.....T.......... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 97.0 32 GTTCACTGCCATACAGGCAGCTTAGAAA # Left flank : GCGGATACACGCACAATTCAGAACGAAACCCGTAAGACTGAGTTGTTACAGACTAACTGGACTGGTGCAACGACGGATTACTATAAAGAGAAGGCAATGTTCCAAGCTTCTCAAGATATTTTTAAAGATCTCAACAGTATGTCGTTATTTGGCGGACGTTAATTGATTTTTACCGCACCCTTTGGCAGTGGCATGTGTACAGGGTGCGGATTTTTCATTCTTCTCGTTATGTTCGTGCTATTTCTTCCTCGTTATTTTCTCGCCCGGTATATTTCTAAGCACCTTTATCTATAGGTTTATTTCTCTTTCACCATTGCTGAATTTCATTTTGTGCGTATGGTTTATTGTGTCGATTTGATGATGTATTTGACCTTTATTTTTTGTTCTTTAAAAAATCGCCTAATAAACAACAGGTTATTGAACTACCTAAAATAAAGGGTATTTTCAGCCTTTTGGTGCTAACAGTCTGTTGTGATTTGTTTTATTCCTGATAATTTATA # Right flank : ATTTTAGGTCAATAACGGAAGCATCGGTGCATGTTCACTGCCCCACTGGTAGCTAAAATATCGGTCTCATCTATTAACTTTTATTATTTATGCCGTTGGGTGATTTGTACTAAATTTGGCGGCTGTTATTCTACAAAATAACAGAATAGTGACTGTTGTAAGATAGCTTAGAAATGAACGATAGAACGGGTCTAGATTACTGCCATACAGGCAGCTTTACCGAAACCTGAACAATAGAATGGGTGTAATACTGTGTTACCTGACGACAAACATCATAGACCAACAGATTAATTGGAGCGCCCCATGCAGTACGAAATTATGATTAAGATCCTGTGTATGACCTTAATCTTCAAAGTGACAAAATTATCGGGCTCACTCAAACCCACAAGTTAAATATCAGGGATAACTGCTCAAACGCTTGATGGATCAGGCGTTCTGTATAGCGTGGAAGGATAGAAATAATCAGACCTAACATACTGATACCAATCGTTAATGTTAGG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //