Array 1 120387-119769 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018176.1 Anabaenopsis circularis NIES-21 plasmid plasmid2 DNA, nearly complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 120386 37 100.0 32 ..................................... GCGCCCCCCTTACGCCATATTTATCTACCTAG 120317 37 100.0 34 ..................................... GAACTCGTATATTAGGCTACTGTCTTTATACGGA 120246 37 100.0 37 ..................................... CGGCTTGACACAATCACGCGAGTATACCAGATATACG 120172 37 100.0 34 ..................................... CTGGAATAACACAATCAATTCCATCTTCATTAAA 120101 37 100.0 33 ..................................... AGAATCACTACCCTTAACTTCGACAGCATCGGG 120031 37 100.0 43 ..................................... TGACTGCTTTTGATAAGTGATGATAGCTCATAAATGTTGATAG 119951 37 100.0 33 ..................................... AAGTAGTTTGCCTGCGGGCGCTGTTCCTCGTAC 119881 37 100.0 40 ..................................... TCGGAGAAAGAAAACTTGACATCTAGCTAGGCACTTGAAA 119804 36 83.8 0 ...-...............T....T...A...A...T | ========== ====== ====== ====== ===================================== =========================================== ================== 9 37 98.2 36 ATTGCAATTTCTCTTAATCCCTATCAGGGATTGAAAC # Left flank : ACCTATTTGTTTACACTTGCGCCGGGTCAAAACTAAAAATAAGCGCCATCACCCTACTTGAGCGCGGTTGATTGTACTACTGGAATGACGCGGCTCTCATGAACGCCAACGCATCGAAGGGCGTTGTTCTACAGGCTATCTTGCTACAGTTAATCAGAAATAATTCTTCAGGTGCGATCACCCGACTATTCATGTGAACAAGGGATGAATTGTCTTGTACAGTTATGATATTAGGTGCAAAGAACCTGAACACAAACCTAATTTTTCGGCTAAATACGCGAATGGGTGGGTGTACAAAATCGGGCTTTCAGAAAAATCGCTGTGTTTCTCTCACCACATACCTTTCGGGCGAAAACTAGTTAAAATACGCCGCGCCCTTTATCCAGTCTGCATTCGGGCGATTTTGTGTCAATCAATTGAAATTTATACAGCTTACAATTGAGCCATTCGCGGAATCGAACCTTGAAAATCGAATACAGATTAGCTTTTAGGCTCCAGCT # Right flank : CTTATTTTTCTTTACCTAATTAAATACTTGAGTTCGAGTTACAGTTAGATATTGCCTCTTCTAATAATTTAATATCTAAATCCCACCACTGTTGTAATTTAATCAAAGCTGGATAAAGTTTTGCATCTCCTATTTCTTTTGCTGCTTCTACAGCCAGCCTACCCACACAATCACTTTCAAGTTCTGCAATTAGCGGACTAATTACTCGCTCATCTTTTCTTAGTGCTAAACCTAGTAATGCTTCTCCACGAATTTCAGCAATAGTCTCATCTTCTGATGTTTCTAAAATTATGCGAGTCAACAAAGCGTCTCGAATAGCTGGTGTATCAGTTTCTATCTGGGAGCCTAAAGAAAAAGTTGCCCAATTCCTAATATCTTCATTTTCATCACTAGATAAATCAATTAATGCTTGAATTGCCAATTCATCTGATTGGCTCATTAAACCAGAAACCACGCCCATCCTGACATCTACATTGGGATGATTTTTCAGCTTGACTAAT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCTCTTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 121932-121377 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018174.1 Anabaenopsis circularis NIES-21 DNA, nearly complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 121931 37 100.0 34 ..................................... CGACTTATACATTTTTCAATTACAATTTTGAGTT 121860 37 100.0 36 ..................................... AAAATTTCAGAAAACCTAACCCAGGAATGATTAATT 121787 37 100.0 38 ..................................... TACTAGGATATCCTAGTAAACTAATGCTCGAAGCATTC 121712 37 100.0 42 ..................................... AAGAGGCAATCACTTGTTGCTTTAGGTAGAGAGCGATCGCCT 121633 37 100.0 39 ..................................... GTCTGTTGTCCTGCTGCCAAATCCGATGCAGACTTGTTG 121557 37 100.0 34 ..................................... GCCTTTTTGTAAAGTAACAGGCACACCAGCAGCT 121486 37 100.0 36 ..................................... CTGGAAATTCAAGCGATCGCCAATGGATTGAAGAAA 121413 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 8 37 100.0 37 GTTTAAATTTCACCTAATCCCTATTAGGGATTGAAAC # Left flank : CGTTATCAAAAAGCCGTCGCCGCCACAACAGCCGCCGATGTGCAACGGGTAGCCAAGCAATACCTCAAACCCGAAAACTTAGTAACTCTAGTTGTCGGAAATCAAACCACTATTAAACCGCCATTAACAGGTTTAGCCAAACAAGTCACACCCATAGACGTAACCATTCCCGGTTCGCCTTCACAAACGAAAAATTAATCGCAATATAATACCTAGATACCCGACTTTTTGGAAAAGTCGGGTATCTGACACCAGGAAATAAAATTCCTCAAAATGCGCGGATGGGTAGGTGTACAAAATTTCTCTTGAAAGACAATAGCTAGATTCCTTTCACTGCAAGCTTTTGCAGAAAAAATAAATAAAAATCATCCGCACTCCCTATCCAGTCTATGTTTCAGCTATTTTGCTTAAATCAACTGACATTTACTCATGTTAAAATCAACCCATCCGCGAAATCGAACCTTGAAAACTAAATACAGCACGCCTTTCCGGCTCCCGCC # Right flank : ACATTACTATCACGGGTACATCCCAGTTTTTATTTAACAATTAGAGAGAATAAATATCATTGCCAGGAGGAACAACGTAGGCGAAACCCTCTCGTATGGTGGCGATCGCATATTTTTGTTCCTAAGTTCGAGACTTTGCGATTGCTTCACTTCAATTCGTTACATACCCTCTGGGAAGGCTAACGCCTACGCAATGAAATTCAAAAAAGTGGGATGATCCCAATTCCAAAACTCTGGACTTAAAAACTCACATTACGATGAAAATTTTGCTTTTATAGACGAAACTCCTTTAATTGTGTCTAATAAATGAATTAAAAAACCTTGAATTTTTTGAATGTGTATACAAAATATAAGAGAGACATTTTAAATGTTGTGTAGCTAGGTTTTAGTTATAGCTGCACTAATTAGGATCACCGTATTTGCGGAGGTAAAATCAATGGCAAGAATAACAATCTCAGACCTTTATCTTAATAATGATGAACAGCATATTACTGAACTAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAATTTCACCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 2 940609-937620 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018174.1 Anabaenopsis circularis NIES-21 DNA, nearly complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 940608 36 100.0 37 .................................... TTAGGTGAATCGGAAGAATGGGAATTCTGGTACTGGT 940535 36 100.0 36 .................................... AATAAATCCACACGCGATCGCCTAGTCCTAGTTGCC 940463 36 100.0 36 .................................... ATACATATATGGCACGGAGAACAGTTAATACTAACC 940391 36 100.0 35 .................................... GGAACTAATGTTGAGGTTCCACCCTGGCATTTGGG 940320 36 100.0 36 .................................... TCGGCTTTTGACGCGCTCGAACTGGGCTTCGACATC 940248 36 100.0 36 .................................... CCTGTTACCAATCATAAACCCCTTGGTACTCCCTAG 940176 36 100.0 34 .................................... TTCCGGAGGAAAGATTGAATCTATATTTGGTCTT 940106 36 100.0 35 .................................... ATGACAAGCTCGTTCCAAATAACGACAACCTTGAA 940035 36 100.0 41 .................................... GTTGCGGTTTACCAGTGTTATCAACCCAAGTAGAGCAAAAT 939958 36 100.0 36 .................................... CGTTTGCTGTCGTTCGGTGCGGCAACCACAAATCGA 939886 36 100.0 37 .................................... CTTCTCGAAGAACTTCAGAGTTCTGGCTAACAAACGT 939813 36 100.0 36 .................................... AGAGTTGCTCCTGCTGTTGTCCGGGAAGATGACTTT 939741 36 100.0 35 .................................... GTAATGGTGGACTAGTTTACGGCAATGGCAGGTTT 939670 36 100.0 36 .................................... GAGTTCTCAGTACATTCCTCATCTTCGGGGGATAAA 939598 36 100.0 36 .................................... AGCCAGATTATCCGCCGCCACCGCCCCCACCATTGC 939526 36 100.0 35 .................................... ACTTTGTAATTGAAGCCCGTACTTACGGACTCTAA 939455 36 100.0 38 .................................... ACAGTAGGACAAGACAAGATAATAAGCTCCGTCCCTGC 939381 36 100.0 36 .................................... AACCAGTCTATCAACGAGATCAAAACAGCCTGTGAG 939309 36 100.0 39 .................................... TAGAGGAAGATTTATATTTTGCATAGTCATTATATATAA 939234 36 100.0 36 .................................... ACTGAAATACAAGAAGCAGATTGGGAATTAAAAGAG 939162 36 100.0 37 .................................... ATTCCTTTAATGGCTTGAATCTTCGAGGAAGAGTTTT 939089 36 100.0 36 .................................... ATAATGGCCGTCTCCCCGTTCTCTTGAAAACACTTT 939017 36 100.0 35 .................................... CGCCTGTTCCGGGAGTGGTTGCGCCAATATTTACA 938946 36 100.0 35 .................................... TTTATTATTGAGTAATCATCTACTATTTGCGTTGA 938875 36 100.0 37 .................................... CTAGTATCTCGAACTGCTTAGGCAATAGTTGTATGTA 938802 36 100.0 39 .................................... TGATAAGCTTTTCCCTGATGATCATCCACTGAGAATGTC 938727 36 100.0 35 .................................... TTCCAAGTGATATTCCTAAATATGTTGACTACTTA 938656 36 100.0 35 .................................... ATGATTGGTTAGCTGATAACAGCGAAGCAACAGAC 938585 36 100.0 36 .................................... TATTTCGTTGCTGCATAGACAGATTGGAATATTTAG 938513 36 100.0 36 .................................... TATTTAGCAAACTGTTTCCTCAATACCTCCCCTATC 938441 36 100.0 35 .................................... TTTTTTAGCTTGGTTAACCCATTCCGCAGACTTTT 938370 36 100.0 35 .................................... CAACTGACGAAGAACTGGAATTATGGGAATCTGGA 938299 36 100.0 34 .................................... TGGAAGACATTAAAGGCAACTTCATGTAATTTAC 938229 36 100.0 35 .................................... CTTGGGGACTAGAGACGGGGAAGAAAGGGTATAAA 938158 36 100.0 37 .................................... CGCCCGGAGTAGTCAAAATCCTTAAATCTGATTGTTT 938085 36 100.0 34 .................................... TCGGCGTTATACCATACGCCTGTCAAGGATATTA 938015 36 100.0 36 .................................... AATCCATTGGTATCCTTCTCGCACACGTTCATGGAA 937943 36 100.0 35 .................................... TTGAATACTGAGTGCGATCGCTTCTGCACTGCACT 937872 36 100.0 35 .................................... CCGTATAAATCAATTTCTGTTCCCGGCCTCAATAT 937801 36 100.0 36 .................................... GCAATAGTTATCTTGAAGATATGAGCCATGTTAGTC 937729 36 100.0 38 .................................... TCAGCAGCCATATTCATGTTAATTGCTTGATTGTTGCC 937655 36 83.3 0 .............................AA.TAGA | ========== ====== ====== ====== ==================================== ========================================= ================== 42 36 99.6 36 CTGCCCAAACCTGTGATGCCAGTAGGCGTTGAGCAC # Left flank : TTGCTCCAAGGCTATGGTGAAAGAATACAGTATTCAATTTTTCGGTCTTGGCTGAGTATGCGATCGCGGGAAAAATTGCGCTGGGAACTCGAAAAGATATTAGCCCCAGAAGATAGTTTACTTTTAATTCGTCTGTCACATCAGTGTGTCGCTGGTATACCAGCCTACAATCGTCCTGGTGTTTGGTCATCTCAAGAGGAGGTATACCGGATTGTCTGATGCAAGGATCTATGAGTGTGAAGTACTAAGCCAGCATAATACAACTGGGAACTCTCATTAGGCTTGCTGTTCAAGGTTTTTAGAACGACTGGAGGTGCTTGCATTTTCTTCTAACTATTCAAAAGCTAAGCAATCCAAGGGTTTTTAAGAGTGTCTGCTACCTTTAAACATAGTGCTGTAAGACGTTGAACAGAGAATTGGGCTATTTTGTTGCTTCTTCAAACAAGGTGCTTGTAATATCACAACAGGGTGGTTCTCTGATATGGTTTTCAGCGATCGCC # Right flank : AGGTTCGTGCAACCAGGGGCAACCTTGTAAAATTTAGTAAAAATAACCATTTGTTTAGCCTCAATTGATAAGAAATACAAATAATAACTTTGCCTAGTTCGTCTCATTTTAGGCAATGTTTTTCAGTTTCGAGACAGAGCGATAATACTTTGAAACACAAACTTCCGTGTACTCTAAGCTCCGTTTTAGGCAAAGTTATTTTACTGTCTATGCGCTAGAAAAAGTATTTGTGCAACTTATCTTTTAATGAGCGCGGTTAAATCTCGTATAAATCTCTGTAACTGTTGCTATATAAGTTTTTTAGCCATAGGTTGCCCCTGGTTGCACGAACCTTCTATTTACGCCCACTTAGAACAAACACAATGTAAGCGACTAAAAAGCCTATTCTCTCGTCAGCGATGACACCCGATTAAATCAGACTTATCAATCTGCCCGACAGCGCGAACGCTACAATCCGCATTATTCCGTTGGCTAATTAAATTTGCTTATCCTCGCTACGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCCCAAACCTGTGATGCCAGTAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 3 994233-993547 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018174.1 Anabaenopsis circularis NIES-21 DNA, nearly complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 994232 36 100.0 36 .................................... TCTTTTGAGTCGCCATCCATATCTGTGTCTATGTCA 994160 36 100.0 36 .................................... GTTTACAAAGGTATTTATCCGCTTGCTCTTGGGTAA 994088 36 100.0 37 .................................... ACTTTTGACGCAATTATCCTCCCAATTCCCGATAGTC 994015 36 100.0 36 .................................... AATATTCTTTGTATGATTTCTTCCGCATCCCTGTTA 993943 36 100.0 36 .................................... TTAACCAGAGTCCAAGCAGCAGAATTTTTACGCATT 993871 36 97.2 40 ..............T..................... GGGATGATTGAGATTAAATAAACGAATGCGCCGTTTAAGG 993795 36 100.0 35 .................................... GAAATGAAATGGCGCAGGGCAGCAGGGATTGAGCA 993724 36 97.2 36 ..............T..................... TGGAATTGGCGACTTCCCCATTCAGAAGCAGTGCGT 993652 36 97.2 34 ..............T..................... ATTGGAAATGCCAACCAGATAACCTCAAAAGTTC 993582 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ======================================== ================== 10 36 98.9 36 GTGATTCGTGGCTTGATGCCGTTAGGCGTTGCTCAC # Left flank : GTAAGGAGGTTTGGTTGTTTATTTTTGGGAGAAAGTGACCAATTGATTAAAACGATTAAACTTGTCTCCCAAGATTATCTAGAGGGGGTGAGACAGTGGGTGATTAGGGATAATCGAGGCAGGTTAACCTTACCCTATTGGGTTGACCATGTGGGGTCAAGAAATACCCGATTTTTGAGGTATCGGATTGAGGAAATGGATAGATTATCTCCTCCAGATTTGGCGTGGACGATGATTCAATCTCCAATTTGACAAGTATCTCTGCTGAGAAAGGGAATTTAGGGTTAAAGAATGGAGGGAAGGTTTACACGGTAAGGGATATGATAATTGAGGCAAGGAAAAAGGTGCTTGCCATTTTTGGGAAAGTTTATCAGTACTGGGTTTGAGGGGTTGAAAGTAAGAGAAACTTTGGTAAGTTTTGTATTTTTGGTTTCTCGATCTGGAAGGTACTTGTAAGATTGTAAATAAAGCTTCCTCAGTTAAAGGTTTTCAACTTTGCT # Right flank : ATATCGAGATTAAATTGATGACTGCGATCGCAAAAGTAATTCGTAGCTTCATAAGTAAAGAGACGTGAACTGAATCACGTCTCCAAGTGATGGGATAAACGCTTTGTGTGTTATGCTACATCGGCTACCAGTAAGCCATTAACAGCGATGATGATTATTTGCGCTGCCAAAGGACTATCACAACATGGCCTATCATCCCTATTACAGGGTTGTGCTACCCATTTCCCCTGTAGATTTTGGTAGAAAGTGCCAAGTAGTTGAGAACCATTCCAGACTCGATACAGTTCACCCAAGTCATCTGGTACTGAGTCAATTTCAATTTCTGGTGCTACTGGGTCGGCCAGGTGGTCAAGATATTCCTCAAATTCTGATTCAGCAGAGGCTGAGTTGCTAAAGTCATCTTGTACAATCATCATGAGTGACCTCATTAATGGGGTTGAACAAAAGGCGATCGCATTTCTCTTGGCGGAGGGCGATCGCCTTTTTCAGTACATCAATAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATTCGTGGCTTGATGCCGTTAGGCGTTGCTCAC # Alternate repeat : GTGATTCGTGGCTTTATGCCGTTAGGCGTTGCTCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 4 2700129-2701287 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018174.1 Anabaenopsis circularis NIES-21 DNA, nearly complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 2700129 37 100.0 35 ..................................... GAGGTAAAAAGGCTTTGAGTTATGCTAGAAAATTA 2700201 37 100.0 41 ..................................... GCGCTCAAAGAACAGTTCAGCTTGGGCTTCCCTCAACTCCT 2700279 37 100.0 42 ..................................... CACGGCTCCATCTTCCATACCCTTGAGATTTTTCCGCATCAG 2700358 37 100.0 35 ..................................... TCCATCATTCAATGGCTTTGTGGCCGCCCAAGAGG 2700430 37 100.0 39 ..................................... ACATTTGACTTCAATAAAAGTGCGAAGCTTGCCACCTTG 2700506 37 100.0 36 ..................................... TATGGCGATAAATTCTGGGCAGTTAGAAACATCTAT 2700579 37 100.0 41 ..................................... TAGCAAACGAGGTACTTATGGCCATGATAATTTTAAGCAAA 2700657 37 100.0 34 ..................................... ACCGCTCACAAAACCCGTGACTTGATGATTGAGC 2700728 37 100.0 37 ..................................... GGAACAGCCACCAAAGCGCCAGCGTTGTTAACTGTGA 2700802 37 100.0 36 ..................................... ATCAGTGATGGTAGGTACAGCCTTAGATATTGCACT 2700875 37 100.0 41 ..................................... AAGCGCTTCAATTCGTAGACTGACTCCTGAATGGTGTGAAT 2700953 37 100.0 38 ..................................... GAGTAACAAATTCCTGCTTACCAGATTGAATGCCGATG 2701028 37 100.0 41 ..................................... ACCGTACCACTCAAGTCTACGGCGTGAAAAATCTTTCTAGA 2701106 37 100.0 36 ..................................... GCATTCCCAATCGCAGACATGGCAGACATATCATAA 2701179 37 100.0 35 ..................................... ACGAAAGCAAGAAGACGATAAACACCGTTCTTGGA 2701251 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 16 37 100.0 38 ATTGCAATTTCAACTAATCCCTATTAGGGATTGAAAC # Left flank : CAAGAACAACCTACATCCGAACGGTTTGCCGAGACAGCCTTACTTATGTATGATATGCTAACTCGAATTCAAGACTCAACATTACCAGGAAGACCAAGCTTAGGTTTGCGACAAGTGCAAATTACTGTAGGTGAACCAATTTCTGTCACCGAACGCTGGGAAAAAGCGCAAAATAACCGTCACGCAGCCAGACAAGCAGCAAGTACCTTGACACAAGATTTGCAGACAGCTTTGGAGAATTTGATTAGTTAATTTGTTGTTTATTTTGACCACAAGCGCGGATGGGTAGGTGTAGAAAATTAGCATTCCGCAAAAACGGCTGTATTCCTCTCAGTGCAGGGTTTTGCAGAAAAAATAAATTAAAATCGTCCGCGCACATTATTTTGTATGGGTTTCAGGGATTTCATATAAATCAATTGACATTATCTGATGTTATAATTAGCCCATCCGCGAAATCGAACCTTGAAAACCAAATACAGAGCGCTTTTCCGGCTCCCGCT # Right flank : CCTGAACGGATGTTGGCAACGATTAATAGAAACCTGATTGCAATTTCAACTAATTCCTATGTAAATCTTTGCGCCTTTGCGCCTTTGCGTGAGACTTAAAATTCTTCTTTTCCAAAATTCAAATATTTTGATATTGTTGGGTTGCACTTCGTTCCACCCAACCTACATTTTTATCCTAAAAAAATAATCAAAGATGTTGCATAATTGCGGGATGATATATCTCACGCAGAGACGCAGAGAGGATTAGGAGTTGATTGAATATTTCACATGAACTGGAAACACCCCCAAAGCAATCAATCTAGCGGGGAAGTCGCGCAAAAATGGCAAGCGTAAAAATGATGGAGGTTGAAAAGTACGATTAGAAGAGAGTACTGGAGCAAATACTCGCTTTTGAATCAATGTCTGAAATGCTTGGATAATGCGTGTGGGTAACTCTCGTTGACGCTGTACTTTTGCCAAGTCTCGGAGTTCTAAGTATTTATTATGCAGAGGTTTGCCGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 5 4669213-4669470 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018174.1 Anabaenopsis circularis NIES-21 DNA, nearly complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 4669213 37 75.7 36 T......ACC..T.A.C..T..G.............. ACTACTCTTTTATGCTGCCGACCGCGCGCAGCAAGT 4669286 37 100.0 35 ..................................... CGGACTTCGGTTTGGCTGGGTGTGCCATTGCCTGC 4669358 37 100.0 39 ..................................... TCGTCAAATAACATCACATCCCCATTGCCGATAGGAGGA 4669434 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 93.9 37 CTTTCAAGTTACCACCTACCGTCAGGGTTGTTGAAAC # Left flank : GCTGCGATCGCACCGCAGAGGTCAGGGATTCGAGTTCCCTATTCTCCATTTGTCCATTAAATAATTATTGTCAGTTTTAAAGAATTATTGTCCAATTTTACCAAGTGAAGGGACATAAGTTACCTATTTTGTTGGCTTTCAGCCATTGAGCTAGTTTTAAAGAATTATTGTCCAGAGTTGAAACCAGTTTTAAAGAATTATTGTCCAAAATTAGGACGCACAATATTATGGAATTTAATTTTGGAAGATTAAAGCAAACCTATTGGTTATTAAAATAAAATTTATTAAATGCTTTTAAAGTGGCTAAAAACCTTCTGTGCAAATTAATCTAGCTTTCAAAGGATTCATTTGCAGCTTAATGCCAAAAATTTATTACCTTTTCGTCTAAAACGGCTGCGTCTCATTGTGCGATCGCAGCGCTCCTTTCAAACTACCCTAGTAAATAACTATACGATAAAAAAGATAAAATTTAGCGCACTTAAAAGATAGATAAATCATGT # Right flank : CTCTGACTTTCAAAATCTTTATTTGCACTGTTTTTCGCAGGTGACTTTGGCAAGTCTACTTAAAAGCAAATTTTCTACAGCAGCCAAATAAACTTAGATTCACCTTGAGTAGCATGAAACTTAGTTTAGACAAGCTTTGTAGACTTTTGGCAGCATCCCAGGGATTTTGCCTCTGCTTTCACTTGCCAAAAATAAAAATTAGGGGGTAGTTAGTAGTTCAGTAGCCACCGTGACGGTATACCCGTACCCTTACTTTGTTATAAAGTAAGAGATAGAAGTTCCTCGTAAAACCAAAATCAAAGATTTCAGTGATACAGGCCGCTCTGGCACCTAACACCAAGCTAAATCTGATGTCAAGAGCAAAGGTTCTGGGCTGTTTGAAACCCTAACACCTTGTACTTCCCATGCGTCTCGGTGCGAGTCCTTTCTCATCTAAAAGCAGCATTTGCTTACCCTAGCAATTACCGCTAACAAACACTTAGATGAAAGCACAGGTAGAG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAGTTACCACCTACCGTCAGGGTTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //