Array 1 1167423-1169712 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056888.1 Citrobacter sp. RHBSTW-00053 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1167423 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1167484 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1167545 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1167606 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1167667 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1167728 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1167789 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1167850 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1167911 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1167972 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1168033 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1168094 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1168155 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1168216 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1168278 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1168339 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1168400 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1168461 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1168522 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1168583 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1168644 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1168705 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1168766 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1168827 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1168888 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1168949 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1169010 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1169071 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1169133 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1169194 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1169255 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1169316 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1169377 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1169438 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1169501 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1169562 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1169623 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1169684 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //