Array 1 42704-46513 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIEY010000012.1 Sphingomonas carotinifaciens strain DSM 27347 Ga0373345_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 42704 29 100.0 32 ............................. TGAACGAAGCGGCTGCGGAAGCCGATCAAGGC 42765 29 100.0 32 ............................. TGTGGGGCGGGATCGCGGCGGCGGTGGAGCGC 42826 29 100.0 32 ............................. GTCCGTCATGGAAGCGGACCGCGATCGGCGGC 42887 29 100.0 32 ............................. CTCCCCGAGGGAACCGTCCTCCGGGTGCGCGG 42948 29 100.0 32 ............................. CTCCGGGGACCAAAATTGGAACCCGCCGATCT 43009 29 100.0 32 ............................. CAGGTGAGCATGGACGTTCCCGCCCGGTTGCC 43070 29 100.0 32 ............................. GGAGATAGGACCATGACCGCAACCGCCCCCGC 43131 29 100.0 32 ............................. ACGATTCCGGGGTTCTCATTGACGAGGGTGAC 43192 29 100.0 32 ............................. TCCGCATCCAGGGCATCGAGCAGGATTTGCGT 43253 29 100.0 32 ............................. GCGTCTTTCAGCGTATATGCCCACGCCTTGAC 43314 29 100.0 32 ............................. TCGAATGCCATAGCATCATTCGGCAAATTATC 43375 29 100.0 32 ............................. GCCTTTGCGGCGGGTTCGATGGCGCTGACCAA 43436 29 100.0 32 ............................. TCGAAGCGCGCTGCGGGAGGGAGGCGATCGAG 43497 29 100.0 32 ............................. TCCTGCGCCCTAGTAACCCTGCGAACTCCGCG 43558 29 100.0 32 ............................. TCGACCTCGAACATGCGACGGTGAGGCAGCTT 43619 29 100.0 32 ............................. AACGTTGACGAGCCCAAGGCATGGGGGAACGT 43680 29 100.0 32 ............................. AACGTAAGAGGTACGAACGCGTGCGCCATCCT 43741 29 100.0 32 ............................. CCGACCGACCCCAAAGCGCGCTTCGGCATTGC 43802 29 100.0 32 ............................. GTCGTTGTAAGCCTTCTGAAAAATCGACACGG 43863 29 100.0 32 ............................. CACTGATGAAACTGGACTCAAAGAAATTCTGG 43924 29 96.6 32 ............................G CGATTTCCAACTCGTGGATCATCTACGGCAAG 43985 29 100.0 32 ............................. TCATCCTGCGCCACGATGCCGCGCTGATGCCG 44046 29 100.0 32 ............................. CGAGGATTTGACGGCCCTTGGTGGTGCAGCCG 44107 29 100.0 32 ............................. TTCGTTCCTGTTAGGGTGAGCCATGGCTGAGA 44168 29 100.0 32 ............................. CGGGACAAGCCTTTTGCCGCCGCCGACGAGCC 44229 29 100.0 32 ............................. GGGTCCTCACCGAACGCCAGCAGGACGCCGCA 44290 29 100.0 32 ............................. CTGGGCGACGGCTTCACGGTCCAGACCAACGC 44351 29 100.0 32 ............................. GTGTCGGGCCAAGAACGCGTGCATGTCTTCAA 44412 29 100.0 32 ............................. ACGATCCTGAGACCGGCGAGGCGAAGCCGGTC 44473 29 96.6 32 ............................T TGCCCTAATGCATCGTCATCGCGGATGACACG 44534 29 100.0 32 ............................. TCATGTCCGCCGGGCATAGGCTGGCATCACTG 44595 29 100.0 32 ............................. TGGCGGCGCAACTGCCCGGTCGCGAGGTTGAG 44656 29 100.0 32 ............................. CTTCCGCAAGGAGCTGACGCCGCGCCTCCAGG 44717 29 100.0 32 ............................. TCGTATGTCGGCGTCATCGGCGAAGTCACGCT 44778 29 100.0 32 ............................. AGCCCCACATTGCGAACAGGGCGCCCCTTGGC 44839 29 100.0 32 ............................. CGAGACGAACACCTTGGCGACGGCGGCAAATA 44900 29 100.0 32 ............................. CACATCTCACCCTTCACCGGGGCGCCCTGGCC 44961 29 100.0 32 ............................. CCAACGCGCCGACCGCGCCCGCGCAGCGCGCC 45022 29 100.0 32 ............................. CGGTTCCATGCCGTGAGGCAATGCGCGATTTA 45083 29 100.0 32 ............................. TCATATGCGGTCTGCCAACCATTCGGGCGGCG 45144 29 100.0 32 ............................. AAGAGGTGAGCGATCTGATCGACCAGATTGTC 45205 29 100.0 32 ............................. GGGCTGGGTCCGGTAATGGGTGACGGCAAGAC 45266 29 100.0 32 ............................. CGCCGATTACCTTAAAGCCAATGTGCCGAATC 45327 29 100.0 32 ............................. GACGCCTTACGGGGCATCACACAGTCCATCGA 45388 29 100.0 32 ............................. CGGTGGCGAGCCGATACAACGGCCCGGCGTTC 45449 29 100.0 32 ............................. CTGGAGGATCCGCGCGATGAGATTGAGCGGCG 45510 29 100.0 32 ............................. GGCGTCTGGATGCCAAGCGCCAAGCAGCGGGC 45571 29 100.0 32 ............................. TTGATCTGCCAATCCCTGAGCGCCGGCTGCAA 45632 29 100.0 32 ............................. CTTTGCGTTGCGATGCTCGACCGGCTCGATGA 45693 29 100.0 32 ............................. AGGCACTGCGCTGGTCTATACTGTGTCCAAGC 45754 29 100.0 32 ............................. CGGGCCAAGACCATGGCCGAAATCAACAGCTC 45815 29 100.0 32 ............................. TCGCGCTGAACCTTCGCGAGGTTTTGCCCCTC 45876 29 100.0 32 ............................. GCTCTCCGGCGCCTCGCGCACCAAGCCGCCGA 45937 29 100.0 32 ............................. GACAGGCATTTTGTCCGTCAGCTTCGTGAAGG 45998 29 100.0 32 ............................. GCTTCCATGGGGATGTGGAAGGGCTTGCCGGC 46059 29 100.0 32 ............................. CGCGGGGGGCGCTCCGGCTCACCCGTGTTCAC 46120 29 100.0 32 ............................. GTCACAGTCCGTGCTTGGCGGGTCACAGACGG 46181 29 100.0 32 ............................. GAAGCGGAGATCGTGCTGGAAGGCGACGGCAC 46242 29 100.0 32 ............................. TGCCATTTCGGCATTTTGCCTCTTGTGGGAAA 46303 29 100.0 32 ............................. ATTATCACGACGTTCAATGCATCGACCGACAT 46364 29 100.0 32 ............................. CTTCGGTCTCAGGAAGGAGGACGAAGCATGAT 46425 29 100.0 31 ............................. TCACTAGCCCCAGCCAAGAGACGATCGCACC 46485 29 72.4 0 ....T..........CT...CG.T..GG. | ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.5 32 GGCTCCCCCGCACCCGCGGGGATCGACCC # Left flank : CGCTGATCCCCGGCATGATCGACCGGATCAAGACGCTGCTGATGCCGGGCGGCGTGCCGGCCGAGGCTGCACCGCCGGACGCCGGCGACGGCGGAGCGGTGACGCTGGACCGGGAGGCGGGGTGATGCCGCTGACCGTGATCATCACCCGCGACGTGGAGGATCGCTATCGTGGCTTCCTGGGCTCGGCGATGCTCGAACTGGCGCCCGGCGTCTACGCGCAACCGCGGATGAGCGCGGGCGTGCGCGGGCGCATCTGGACCGTGGTGGAGGAATGGCACGGCCGCCTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAAGCGGGTGCGGCAGGCGGCCTGGGCCTGGCAACGCTGGGCGAGCCGCCGAAGGACGTCGTGGCGCATGACGGCATCCTGCTGGTACGCCGGGCACTACCCTCGCGCGGAGTAATTGTGGGGGAGGGCTGAGCGCGGTTTCTTTGACATTGTGAACGAAAACAGCGATCTGACTGGCAGA # Right flank : CACAACAGTTTTGAACCCACACCTCCAAATCCATACGCCACTTACGGATAGCTCCCCGCCCCACCCGCTGCTACAACAGCAATCGTCACCGCTATCGCCCCCAAGCCACGACGCCCGCATCCATCCGCCACCCGATCCCCACCACCTTTTGCCGCGGCTCCTTCACCCAACAACCCGAGAATGGTCATGTCAGCGATCCAGCGTCTTCTTTCGATCATGGTTCGGCTGCGTGATCCGGAGGCGGGGTGCGAGTGGGACAAGGTGCAGACGTTTGCGAGCATCGCGCCGTACACCATCGAGGAGGCGCATGAGGTGGCCGATGCGATCGGGCGCGGGGACATGGACGAGTTGAGGGAGGAGCTCGGCGACCTGTTGCTGCAGGTCGTGTTCCATGCCCAAATCGCCAAGGATATCGGGGCCTTCGACTTCGACGACGTGGTCGCCGCGATCAGCGACAAGATGGAGCGGCGCCACCCGCACATCTTCGGCGATGTCGCAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //