Array 1 314701-315244 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEHH010000002.1 Rhodopirellula sp. JC639 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 314701 36 91.7 37 ......T..................G..G....... GTGGGAGGAAGCCGTTTCGACGAATAACGTCGAAACG 314774 36 86.1 36 .........A......G........GT.G....... GCGGTCGGTTGAATTTTTTTAACCGACCGCTTTGAG 314846 36 83.3 37 ......T.G.......G........GT.G....... GTAAAGGAGAAAAAAGTTTCTCCGTTACCGAAGGATG 314919 36 100.0 35 .................................... CTCGGTGTCGATTTGTGCGCAATTGCGCACATTTT 314990 36 100.0 35 .................................... TCAATGTGCAAAATCGCATATTGTAATTTCCCAAG 315061 36 100.0 37 .................................... CTGATTCCCTGCAAATTTGCAGGGAATCGCTAGTGGT 315134 36 100.0 39 .................................... TCGAGTTGTGGCATTCAAAAGGCAGGACGCACGCGACCC 315209 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 8 36 95.1 37 GTCACACCACCCACTCACTCAATCGCCCACTGCAAC # Left flank : GGCGGCTATCTCTTCCGGTGTCGGGCAGTAGAAATTTAAATCCGTTCTTTCGTAGTCTTCCATGCCGTAATGATACGGCAACACGGGCGATCGGTGAAACGATTGACGACGATGCGGTCGTGATGCCCGAGTGGTTTGGCGGGGGCAACCATTGTCATCATGCCAACGGTTGAACCACCTGCGTGATACAGGCGGTTGAACTGTCAAGATTAGCTTGACGGTTGGTTCGACGAAAATCGTCGATGCAATTCAGGCCTGACGTCAGGCCTGAAAGTAAGTTCGGAAATGCGAACTTACATTCAGTGCAATCGATTGCACTGAAACCAAGTTGGGATTTTCCAACTTGCCCCGAGACGCCACACCCACCACCGATCGCAAAGGTCACTGCAACAAGGTGTCGGAAATCCGATACCATCTTTTCCGCCTCGTCGCATCGTCCGAGCATCCCAACGGTCGCTGCAACCAAACTCGAAAATTCGAGTTTGGTTATTCGTCGCCGT # Right flank : CCCTCCCCTCCCCGCACCCGGCAAAACACGGGACGAAAACAGGCGTTTGCGAGCGGTCGCTACCGCACTTCCCGCCCATTGACGATCAGCCGCGAAAACTCGCCATCGATCCGCACCGTCTGACCATCGGTTTGGACGCGAATCCCGCCGGCGGAACTGTGGACGTTCGCCTGGCCCCGTGTCTGCGATTGCGTGACGGTCGGGGATGTCGGATTAGGCGTGCATCCGAGGGCGATGGCGAGCGATAGTGGGACCAGGGAACGCATGGGACTGATGGGGTTGGGGAAAGCCGTGATTCTACCCGTGGAGCGGGGAAAGTCGATTCAATGTTGACATCGGGAGCGGATCTGGGGTAGGCTTCTCGGTGCTGTTGATCGGAACTGAACACCCGAGAGACTTGGCCGCGGTTTGTTAGATACCGCTGGCGACAAGGCAAACACTTACCAATCTTCCATTGTTGAGAAATGAAAGCGTCGTCGTATTTGTGGGACCAACTTCAA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCACCCACTCACTCAATCGCCCACTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 47250-47088 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEHH010000056.1 Rhodopirellula sp. JC639 56, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =============================================== ================== 47249 23 95.7 47 ....G.................. GTCTGCCGGCGGCGTGAGCCGCCTGTTAGGAATGCTTGGTTGGCAGC 47179 23 100.0 46 ....................... GTCTGCCGGCGGCGTGAGCCGCCGGGATACGGGCTCATCAAACACA 47110 23 95.7 0 ...................C... | ========== ====== ====== ====== ======================= =============================================== ================== 3 23 97.1 47 GAGGCCCGGAGGGCCGGCAGAGT # Left flank : CATGGTGTTTCATCTGTTTGTCGATGTAGTCAAAAACCGGTTGGCGCATCGAGGAGCTGACGGTGAATGCCCCGTAGCCGTCCTGCCACTGAAACTTCCTCGGACACCACTTGTTGTCATTGATGTGTTTGCTCGTGTTTGCCTTCACGCGTCCGACAAAATCTGCCACACAGACTTTGGTTGGAATTCGAGCGAGCAAGTGCGCGTGGTCATAGAAGCCATTGACGTTCAGCGCGTATCCGCCAAGTTTTTTTGCAACACCTGACATGTAGCAAAACACCTCGTCACGAATCTTGTCGCTGAGATATCGACGCCGTTCCTTCACACTGAAAACGATGTGATAGAGCAGTTGGTGATGGCTCATCAAATGCCCTCTCGAACAGGCGAGTGAATAGAAGAGTAGGCGAGAGAGCTTGATCCTATGGCACCGAAAACTCCATGGCAAGCATCGTCGACACTCTCAAGGCCGGTTGTGTGCTCGCTGTCCTCCGGCAGGCAGC # Right flank : AATGTCTGGTGCGCGTGAGCCTATCGCTGCGGCGCCGCCGGAGCGCCGGGTTGGCCTTGGGCGATTTGCGGGGGCATGAAGTTCTGTCGCGTGATCTCCCAGTTGGACGGCGGCTTCTTGGGGATGAAGTTGCCCATGAATTGCTGCAGCCCCGCCCCGATCGCGTTGCGTTTGACGTCTTTGAACTCGTAGTGGTCCCACTGGGGCGCCAGTTTCTCGTGGAAATTCGGTGCGTACATGATCAACACCTCCGGCTCAAACGCCGCGCTCAAGACGACTTGCACCATCTTGTACTGGGCCCGGTCCTCTTGCGCCTTGGGCCAGGCTTGGATCAGGAACGTGTTGGGTTTCGGCGACGGTTTCAGTGTCACCCAATAGCGCTGCTTAATCTTCTGGGCGTCCAAGTTAAACACGAACGGCAAGGGGCTGTTAAAGATCTGTTGCCCTTGCATGTTCGGCGGCAGCGTCTGCACGTTGCACTTCTTTTCGCCGCGATCGTA # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGGCCCGGAGGGCCGGCAGAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 11702-13275 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEHH010000018.1 Rhodopirellula sp. JC639 18, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 11702 36 100.0 36 .................................... GCGGCCGATGCCAGGCACGCATTTTCCGGTGTTGCT 11774 36 100.0 38 .................................... TCCAACGCTTCATTTCGCGCAATTTCTTCGGCCAATTG 11848 36 100.0 39 .................................... CCGTCGACATGAGCAATGACGCGGATTTTACCACTGGGG 11923 36 100.0 38 .................................... GATGATGCGATGAGGTATGCGGAGGAAGGGCCTGATGG 11997 36 100.0 38 .................................... TGGTGGGGCCGGTCTACGCGCCGGGAAGCACCGTTACC 12071 36 100.0 39 .................................... CCTCACCAATTGGAGTATCCAATGGCAACTGCAACGAAG 12146 36 100.0 36 .................................... GGTGAGCATTTCTGCCGCAAGCCTGGCGGCGAGGTC 12218 36 100.0 37 .................................... ACAACCAACGCTGCCGACGGCGGCCGAGAGTCATTCT 12291 36 100.0 35 .................................... ACAAGATGCTTCGCGGGGATTCGCACCCAACAGTC 12362 36 100.0 35 .................................... ACTGCCGTCTTCGCCAAACATCACGCAGTTCGGAT 12433 36 100.0 36 .................................... CAGAGTAAACGTTGTGTCATTTTTCAACTATTTACA 12505 36 100.0 36 .................................... GATTGCTTCATTGATCCGAGCACAAACCCTGCCGGA 12577 36 100.0 39 .................................... GTTGTCCCTTGCCCAGGTCGCCGGGGAGTAGTGATTCCG 12652 36 100.0 39 .................................... GCCGATCAGTTTATTCGCACGTTGAAGGGTCGAGCTTAC 12727 36 100.0 34 .................................... TTGCCCTGCCACGTCTCCCGATCGTCGTCGTAAC 12797 36 100.0 37 .................................... ATCGACGCGGTAGTCGGATGATGAACTGCGCCCCTTT 12870 36 100.0 37 .................................... GTGTTTGTCGGATCCGGCATGATGTACCGCAAATCTG 12943 36 100.0 39 .................................... CCGGCGTGCTCCAGGTCGTGCACATGCCGCTCAACCGCC 13018 36 100.0 40 .................................... CCAGCCTGATGTCGCCCTCATCTTCCAGCACCGACACGAT 13094 36 100.0 38 .................................... GCCCACCGCTTGTCTTCTTGCGTGGTTTCAGATTCTCC 13168 36 100.0 36 .................................... CTTCTTGATCTTCGCCAGCATTTCGCCCACGCCCTT 13240 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 22 36 100.0 37 CTTTCCGCGTTTATTTGAACGCGGCCTCATTGAAGC # Left flank : TTGATGGAACCTTTCCGTCCGCTGATTGCGGAGTCGGCGGTGCTGTCGGCGATCAACAATCGGATGGTCACGCCGGAGCATTTCCTTGTGGCGGGGCAGTCGGTGGTGCTGACCGATACCGGACGAAAGCATTTCTTGATGGCCTACGAGAAGCGAATGGATACCACGGTGACTCACCCATTATTCGGATATCGGGTAAGCTACCGTCGGCTGCTGGAGATTCAAACTCGGTTGCTCGCCCGCCTGCTCAGCGGCGAGATCGACGACTATCCAGTCTTCGTGACTCGATAGATTGATCCCCCAGGCTCGGAATCGTGGTACGTCACGTGTGCGAGCGGTTCGGCGGTGACGAATCCCCCGCAACCGCTCGCAGTCCGGCAAATCACGGTTCCAAATGGCCCCCACGATGTCATTTTCCCACGATCGGATCCCGTCATGGCACCGACCGCTCGAAAAACGACCTTAAAATCCGCTAAAATCCCGAGCCTCCGGCCGGGGCC # Right flank : CTGAGGCGAACGCCTCGGCAGATCACGGTGAAGGCTGGGCACCGGCCCGCGCTGACCTTTCTCATGATCATGCTGCCCCGGATCTTTCTGCCATCTCGTCTCGATTCGGCTGCACGTTTCGTTGTCGCTGGGGGCAGGGGCAACAATGGAGTGTCAAAAGATTGAGGGGGCAGAAGCGACTCCTCTAACCCGGCCCTCTCTGGCGTTTGCTTGCTGCGCATACGCCGGCTCTCTCTGAGGGAGAGAATTTAAATGAGCCGCCAAATCTTGCCGTCATACAATTGACGTCCCGAGCGGCGAGGGGGGATTCGCCTGAAGGCTAGCTGGACAGCGCCACTTTGACGTAGCGACGCTCGATGCGGGCGTGGAAGACCCCGGAGATCCACCTTCTGGCGAAGGTAGCTACGTTCGACCGGCAGTTCACGGTGTTTCGTGAGCAAAGTGGCGCTGTCCAGCTAGACACCAACGCGCGCGTTTATTTGGCTCGCGGGTGCGCGCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCGCGTTTATTTGAACGCGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //