Array 1 262649-264001 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR698976.1 Campylobacter lanienae isolate MGYG-HGUT-02308 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 262649 37 100.0 37 ..................................... AATAATTTGTCTAGGCTAAAATTAGCTACTATATCTG 262723 37 100.0 35 ..................................... TTTTCTACATTTTCATTATAAGCTTGCTCTAATTC 262795 37 100.0 34 ..................................... ATAGTGATGATTTTCCAAAATCGCTTAAAATACC 262866 37 100.0 37 ..................................... TCCCAATATTTGCCTTTTAAAACATCCTTAACTACAT 262940 37 100.0 35 ..................................... CTCAAAGTGGAGCCTATAAAAATACAATTAGAAAC 263012 37 100.0 37 ..................................... ACAAATGCGTTTATTTTCTCTCTAGGGCTTGATTTTT 263086 37 100.0 38 ..................................... TCATTTATGTTAAATGGATATTCCGTGAGCCACATTAA 263161 37 100.0 35 ..................................... TAAAAGCAACATTAGCTCTAAGAAAACCAGTATCA 263233 37 100.0 36 ..................................... TTAAATATCACTATGCGAGTATATGTAGAAGCTAAT 263306 37 100.0 37 ..................................... GGATATAAGCTCCAAAATACTCTAGGCACGGACGCCC 263380 37 100.0 35 ..................................... TATAGATAATTATTGCCCCCATTCCCAAAACTCCA 263452 37 100.0 37 ..................................... AGCATCGTCACTCTCTCGCCTTTCAGCAAAATTTGGC 263526 37 100.0 35 ..................................... TATATGGGGAGTAAAAATCAAATAGCTAAAGAGCT 263598 37 100.0 35 ..................................... CTCAATTGATGGGGTAAGTGTGAGTTATCAAAATA 263670 37 100.0 37 ..................................... ATTAAAGTCCGTCAAGAAAAAATGTCAAAAAAGTTAA 263744 37 100.0 35 ..................................... TGCTAATTTGTCCCGCACTGCCTAAAGCTTGAGAT 263816 37 100.0 38 ..................................... TAATTTCTTTAATTACTTCACGTCTGTCTAGCGTTTCA 263891 37 97.3 37 ....................................T ATATTAAGCTTCATACCAGTAAGACAGGGGGATATAT 263965 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 19 37 99.9 36 GTTGCAAATTATACCACAATCCAACTTGGTTTGAAAC # Left flank : AGTTTAAAAACCAATCAAAGCCAATTTTAAGCAAGGGTGCAAAAATGCAGCTTATAGCATATTCTAAACTTGCTAGCAAACATTTTAAAAAGCCTTTTCATAGGGTGATTTTATGCTACTCAAATAATCTAAAATTTAAAATCTTTGAAATTTATAAAGAGGATTTAGCTTATTTTGATAAAACACTAACGCAAATTCAAGATCTATTAGAAAAAGGATATTTCCCCCAAAGCTCAGCTAGCATTACAGCTTGTGCGCAATGTGAGTTTAAAAATTATTGTGATGATAGAGAATAACCGGGGGTGCCAAAGGCAGTTGCCCCGATATGAAAACACCTTGTGGTGATTTCAAACGCTATAAGCTAGATTATGGTATAATTTGCGCTTGAATTATAACATATTTTTCCACAAATTCGCCACTTTTTGCGATTTTTTTCTAAGTGGAAAAAATTTTACAATTAACTAAGCACAAAATCCCTAAAACAGGGCATTTTGTGTGGA # Right flank : CGAGTATCTAAGTGCGGTGGTAATCCCTTTTGTAACGACCATCTTTTAATTTAAACATACCTTATTGCCTTTGCTTATATTATAAGACCCTCTTATAATTTTGCTTAATTTCTCTCCTTTCTTAATAAGTTTTCTATGAACTCTCTTCCTTTTGGTGTTATAAATAACTTTCTAGCTAAGTTTCTAGTATCTCTATCATCATAGGCTTTACTTATAAAACCATTATCATAGAGATATCTAGCGTGAATGCTAGTATTAGCCGTAGTCCAGCCTAGTAACTCAGCATAGAAAGCCTGTGTTTCTCCTTCGTGTTTTGCTATTGTAAATAACAATATAAAAAGCTTTATAGAGTAGCTCTTTACAGCATTACCATTACCATTAGTAGGTGGTTTAAAATTATCTAATCTATTTAAAAGCGTTAGAGCTTCACTGACCCTATCTAGATATGTGTTTTGCATTCTGTTCTCCTTTATATTAACTCTGCTTTAATTGCTTTATCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAAATTATACCACAATCCAACTTGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //