Array 1 1057743-1057954 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123044.1 Streptomyces sp. ADI95-17 scaffold001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1057743 29 96.6 32 .........................T... TTCCGGTCGCACGACGGCTGCCACTGCGGCGT 1057804 29 100.0 32 ............................. GAGGCGCGCGACGCCCTGGCCCAACAAGTGGA 1057865 29 100.0 32 ............................. GCGTCCGGGGTCCAGTTCTTGTAGCCGTGGCG 1057926 29 93.1 0 .........................T..T | ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTGGTCCCCGCGCGTGCGGGGGTGGCCCC # Left flank : GTACTGGCGATGGCCCCCTGGCTGCCCGAGGCCGACGCGGACGGATCGGACGCGGCGGACGGGGCGGAGCCGGTGAAGCACCTGCTCGGCCGTCAGGTGCTGCTCGTCCACGGCACCAACGACGCCCGCACCGACCCCGAGCTGTCCTTCCGGCTGGCCGAACGGGCCAAGAAGACCAACCGCGACACCTGCCGCTTCGAGGTCCACTCGGACGGCCACGCACTGCGCCAGCACCGGGCCGAAGTGACGGCCCTGGCCGCGGACTTCGTGTGCGGTTCACTGTTCGGCCGGGCGTACGCACGCCCGGTCGCCGACGCGCTGGCGGCGCCGCCGCCGCTGGGGCTGCGGATGCCGCTGGCGGCAGGGTTCGGGAAGTCGCTGCGGGGGTGACTGGGCGCTTGGGAGAACAGGGAGCGATGACGCTTATGCCGCGTATGCCGGATTCAATGAAAGTGAAGAAAAACAGCACCTTCTCTCGATAAAGTCGCAGGTCACGAACT # Right flank : TACCCAGCGGGGGGGGTGGTGCTCTGCGTGAGGCGGGCCCGGTCAGTCCGGCAGAAGATGCCCCCGTCGCGACAGCAGGAAGCGTTTGAAGGCGGCGACCGGCGGTGTGTCGGGGTGGCCGTCCAGCCAGGCGACGCCGATCTCGCGGGCCGCTCTCGGGGCCGTCACCGTCAGTTCCACGACACCGGGGCGGGCCACCGCGGGCGGTGGGAGCAGGGCCACGCCGAGGCCGGCCGCGACCAGGCCGCGCAGGGTCTCCGCCTCCTCGCCCTCGAAGGCGACCCGGGGTGTGAAGCCCGCCTCGGCGCACAGGTCGTCGGTGATCCGCCGCAGGCCGTAACCCGGTTCGAGGGTGACGAACTTTTCGTCGGCGGCCTCCGCGAGGCGGATACGGCGGCGGGTGGCGAGGCGGTGGTCCTCGGGGACGACGAGGCGCAGGCGCTGTTCGTCCAGGCGGCGGGCGACGAGGTCGGGGGCGTCGGGGACGGGTGAGGTGAGGC # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGCCCC # Alternate repeat : GTGGTCCCCGCGCGTGCGGGGGTGGCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 115732-113487 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123055.1 Streptomyces sp. ADI95-17 scaffold012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================================== ================== 115731 37 100.0 36 ..................................... GGTCCGGCCACCCGGAACGCGACGGCTGCGTTCCAG 115658 37 100.0 37 ..................................... GACTCTCGCCGCCACCGACGTCGCACTCGCCTCCGGA 115584 37 100.0 36 ..................................... GACGGCTTGTCAGCGTCCTTCCGCAGCCACGCGGGA 115511 37 100.0 36 ..................................... TTCGAACGCTGCTCGGTGACCGTGGGAGACGTGAAT 115438 37 100.0 36 ..................................... GACCAGGATCAGGTCGAGGGCGTCCCGGCTGCCCCA 115365 37 100.0 35 ..................................... TGGCAGACGACATACACCGAGCGGACCGGGCTCAA 115293 37 100.0 37 ..................................... TTGTGCATGAGGTTGGCTTCGATCGGGTCGCCGCCGA 115219 37 100.0 37 ..................................... ATTTTCAAACCCCCTGTGTGAGAACTACGCCGATACC 115145 37 100.0 36 ..................................... TCCAGGCGAGCCAGGGCCTCATGCGTCGTGGAGACG 115072 37 100.0 34 ..................................... GGCCGCCTTGCGCTCGATCCGGGCAGCAGCGGCA 115001 37 100.0 36 ..................................... GGCAAGCTGCCGCTCGGGTACGTCAGTCCGACTCCC 114928 37 100.0 36 ..................................... CCGGAGGCCGTCCGGGTGCGTGACCCGGATGACGTC 114855 37 100.0 37 ..................................... GCGGTTGGTGGGCACGGGGCGGGGTCCTCTCGGCGAG 114781 37 97.3 36 ..............................C...... GTCAAGGAGGTCCGCGACCACGCCCGCAAGGTCACC 114708 37 100.0 36 ..................................... GCCGCCCATCACTACTGGGGCGACTCCGTACCCGCC 114635 37 100.0 35 ..................................... GCCACCTGGTGGCCGACGGCGACGACCGGGCCCAG 114563 37 100.0 34 ..................................... ACGAAACGTCGTCTGCGCAGGTCAAACCGGCGGT 114492 37 100.0 36 ..................................... GACTCCGGGCTGGAGCTGAGCCTGGCCCCGGGCGAC 114419 37 100.0 35 ..................................... AGCGAAGCCGCCCTGGAGCGCGCCCTGGAACCGCA 114347 37 100.0 36 ..................................... CCGTACGACTGCCGGTATAGGTCGTCATTGAAGGGG 114274 37 97.3 37 ...................C................. TCGGCGTCGGCCTGCTGCTCTGCTGCGCGCTCCTCGG 114200 37 94.6 59 ..............................G.T.... TTCGGGTCGATCGAGGATCGCAACAGCCTGGCCACCCGCGCGGCCGGCTGGCTGCTGTC 114104 37 94.6 34 ..........G...........A.............. TGCTGACGGGCTACGCGATGCTCAGCGGAGACGG 114033 37 89.2 37 ..........C.T.C....G................. GGTCCGAGGTGGGCGCCGAAGGACAAGCCGGTCGTCG 113959 37 91.9 36 ..........C...C....G................. GCTGTGCTGCGGGCTCAGACCACTGGCACGACCCGG 113886 37 70.3 23 ..........C...C.......AA..GC..CTC.GC. GGTCGCAACCCGATCGCGGCAGC C,AG [113862,113866] Deletion [113827] 113823 37 81.1 38 ..........C...C....G...........G..GGA GGTTGGCGGCGCCGTCAGTAAGGCGTTCGGGGCCCAGA G [113793] 113747 37 86.5 38 ..........G...........A........G..GG. GCACTTGGGGCATGTGTGACGCACATCTACACCCCCAG G [113717] 113671 37 83.8 35 ..........G...........A........G..GGG CTGCGGCGCCTGTTCGCCCCGCGTGCCGCCCGCGA G [113641] 113598 37 83.8 37 ..........G...........A........G..GGT CGAAGACGGGCCCGGCCGGGGGCGGCGTCGACGTCCA G [113568] 113523 37 94.6 0 ..........G...........A.............. | ========== ====== ====== ====== ===================================== =========================================================== ================== 31 37 95.6 36 GTGGCGGTCGACCTTCGGGTCGGCCGAGGATCGCAAC # Left flank : CAGGCCCGCATCCTCGCGCGCCATCTCCGAGGCGAACTCCCCGCGTACCTCCCCTGGACCGCTGTCTGATGGAACTACTCCTCACCTACGACGTCGACACCACCACACCCGAAGGCCGCCGCAGACTCCGCAAAGTAGCCAAACTCTGCGAAGGCCACGGCATACGCGTCCAGAAATCCGTATTCGAAATCATCACCAACGACAAGACGCTCCTGACACTCATGTACGACCTCGAAGACCTGATCGATGCCAAAACCGACAGCATCCGTATCTACCGCCTACCCCAAGCGGGCACGGAAGACGTCCACACACTTGGCATCGCTGCCACCCACCCCCACCGAGCAGACCTCATCCTGTAGAGAACTGGCAGCTTCGGAACCCCAAGCACGCACACGACACGCGTATCGCGCCCAAGGGAAATGTCTGCATTAGGTGCATATTGGTGTCCTGTTTCAAGGTGGGCTGATCTCAACATTCAGCGTTTCCGCTGGTCATCCAGG # Right flank : GCCAACGGCCTCGGCGGCGTCCACGAAGAGAACGAGAAGGTCATTGCTCCGGCTGCTTCGGGCGACAGCTGATCCTCGGGTGCGGCCGGAGACATCGGCGGCGGCCACCAAGCCGGCCTGCGCACCATCTGGCTGCGCGGCCGCCTCTGGCCCGAGAGCCTCCTCGCCGCGCACCACGTTGTTGACGACGTCACAGACGCCATCGCCATCCTGCTCAACGAGGCGGAGTAGCACCATGGACGAGCCGACCGTCGGCACCCTCCATCCCGGCAGCATGGGCGCTGCTGTCGCCGCCTGCGCCGCGACCAACGCGGCCGCGATCGTGTGGTGCGAGGCCGGGCGCAGCGCCGCATCTGGAGAGCGCGCCGCCCGCCGACCGGCGACGAGATCACCACCGGGTCCGACGGCATCGTGACGGTCCCTCTCGGAGGATCATCCCTCGCTGCGGTCCTGGACTGGTGTCATGAGATGCAGGGTGTCCTCAACCAGGATCTGGAACG # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGACCTTCGGGTCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGGCGGTCGCCCTTCGGGGCGGCCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-15.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [37-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 124525-124928 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123055.1 Streptomyces sp. ADI95-17 scaffold012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 124525 37 100.0 36 ..................................... TTCACCCGCTACGCCACCGTCCGCGGCGACAACACC 124598 37 100.0 37 ..................................... TGCATCAGCTCCGTGCTGGACATCTCCAGCGACGAGA 124672 37 100.0 35 ..................................... TACCGGGACGAGGCCCAGGGGCTGCTGTACGAGCT 124744 37 94.6 36 ........T..........................G. ATGCGCGACTCCGGCCGCCTCGCCGACTCCCCGGTC 124817 37 83.8 38 .....A........TT..AAT................ GAATAGGACCTGCTCGAAGCAGGTCAGGAAGCCTCCAT 124892 37 91.9 0 ..............T...A.........A........ | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 95.1 37 GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : TTCCTTATGAGGAATCCCTACCGGCTTGCCCATCGGCTCGGAATGAAAGATCAACCGATCCTGCCAGGCGCAGCACCCCTTCCCCACGTCATGAACCAGCGCCAGGTACTCAGCCACCTCCGCAGCACCGAAAGCCTCGGCGAAGGACCGAGCCAAGGCTGCCGAGCCACGCAGATGGTCCTCCAGACTGTGCCGGCACCCCGACCGCGGACTACGGCTGTGGGCGAACAACTCACGCTCCGGCATTGACCCCCCAGGTTCGAACCACAGGCTTCTACGAAGCCGCCACCCTAGGATGAGTCACTGACACGGCCATGGACGCGTGAGACTGCTACAGGCGCGAGCACAGCTCCGCCACGACCCGCTCTCATACTTCGGAACCCCAAGCACACACGACACGCTTATCGCACCGAAGAAGAATGCCCGCTTTGTGTGTATATCGGCACTCTCTCCCGTCAACATGAACCCGCCATCTATAGTGAATCCGCTGGTCATTCAGT # Right flank : CGTTTCGGGCCTGGCGGATTGGGCGCGGGTGAGTGTCGTGGCGGTTGCCCGGGGCGGCCGAGGGTCTCAACGCCTGCCATTCCTGGGGGCCCAGGATTGCATCGCCGCGAGAGTTCTCGCCGAGATGGCTGTGACCGACCGATGGCGGTCGCTTTCAGGTACTACCAGTGCTCACGGGGTACTTGGTGGGCAGAATCTGCTCTAGTGAAGTCGGTCGCTTCGGTCACTATGGTCGGAGAGTTGTTCGGGTGCGGTATCCAGTCTGTTGTTGGGGCTTCGGAACCTCAAGCACACACTCGACACGCCTATCGCACCGAAGGAAAATGCCCACTTCGCACCGACATCGACACTCCTACCTGTCGGCATATTCCCGCCCTCTATAGTGAATCCGCTGGTCATTCAGCGTGGCGGTCGGCCTTCGGGGCGACCGAGGATCGCAACTTCGCCCACTGACCCCAACCCGCCGAAAACCCCTGATGTGGCGGTCGGCCTTCGGGGCG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-18.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 126254-126514 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123055.1 Streptomyces sp. ADI95-17 scaffold012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 126254 37 100.0 37 ..................................... CCTCAAGAGTCGGTGCCGGCTCGGGCGATCTGCCAGG 126328 37 100.0 39 ..................................... GACATCCCGCTGCCGACGGTAGAAGCCCAGAACCCCGGA 126404 37 97.3 37 ...................T................. ATACATCCCCTGGTCAGTGAGACGGCCATGGGGCCGG 126478 37 94.6 0 ...................T..G.............. | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 98.0 38 GTGGCGGTCGGCCTTCGGGGCGACCGAGGATCGCAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGCGGCTCATCTCCAGGGAGAAGAAGGCGCTGGT # Right flank : CCCCCTTACCGGGGGCGTGCTGCGGGCAAGTTTTCCTTTCTGAAGGAAGAATTCCTGATCGACGGAGCATGGGGTGGTCTCGACCTTGACGCGTCGATGCGGCACCTACGAGCCGGGATCGGGTCCGGGGGCAGCACGATCTCAGAAACGGCGTTCGCGGCCCTGGGGGCCACCAGCGTGGTCCTCACACCTGTGATCGTTGAGCAGTGCGACGCCATCCGGGTCGAGTTCGCGACTGACAACGGCGGCTGGACAGCCACTCTGGACTTTCCCACCCAACAGGTGACCTTCCTGAACAAGACCACCGGAGAAGTCGAACAACCGCTGGCTGTACGGCCTGAGGCCGGCGAACGGGCAGCAGGCTCCTTCTCACTGGAGCGCATGGGCATCCCCGCCATGGAGACCCCGCGCGGGAACGTAACGATCGACACTGTGCTGGTCCTGGTGTACCTACAGCAGCAGCATGCGGGACGAGACACATCGGGACGCCGAGGCAGCTC # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGGCCTTCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGTCCTTCGGGACGACCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.60,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 735480-735085 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123047.1 Streptomyces sp. ADI95-17 scaffold004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 735479 29 100.0 32 ............................. TCCTTCCGAGAGGGCCTGCCGGACCTCTGGCC 735418 29 100.0 32 ............................. TCCCAGAGTTGGGCCCTGGTGCGGTACTCGCG 735357 29 100.0 32 ............................. GGGAATGCCCAGTACCGGATTGTGAACCTGTT 735296 29 100.0 32 ............................. TCGCCTCCCGCTGGACGGCGTACCGGGCGGGG 735235 29 100.0 32 ............................. AACGACAGCCGCGGTGTCTCCTACCAGCAGAT 735174 29 96.6 32 .............G............... ATGAACGTCTTCGAGAAACCGCCGGAGGAGAC G [735153] 735112 28 93.1 0 .....................C..-.... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GTGGTCCCCGCGCATGCGGGGTTGGTCCC # Left flank : TACGGCGCCCGCGACGAGAAGGCCGGCGCGGCGGGCTCCCTCTGGGACCTCGTACGCGACCGCCGGCTCAACCACCGCCCCGAGGTCATCCACGGCGTGCTGGAGCAGGAGTGCGCAAGCCTCCTGACGTCCTTCTTCCGCACCCCGTTCCGCACCTCCTGAGAACCGATTTCTGTACACGGCGGGGGATGGTCTAAGCTCTCTCTCGGTAGCGTGTCCGAGCGGCCGAAGGAGCTCGCCTCGAAAGCGAGTGTGGGGAAACTCACCGAGGGTTCAAATCCCTCCGCTACCGCCATCGACGCCCTCCCGGACTGCGGAAACGCAGACCGGGAGGGCGTTCGCGCATCATTGGGCCCGCCACGCCGGAGCCGACGTCGGCTCTTGATCCCCGCGCGGGACTTAAGCACAACTGGTCGAGTCGAGCGTGTGGCGAAATGTCTGAATCTCAAGAAGTAAGTAAAAACAGGCTCCCCCTGCCATAAACCAGCAGGTCAGGAACT # Right flank : GCGAAGTGGCCGAAGCGGTCCGGAGGCCCCGGCCACGACTGTGGCCCCGCACGACTGTCGTCGTGCCGGGGCCACAGATCGCCCGCGCTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACGGGGCCCGCCGGTCCTCGTCGCGGTCAGGGGGGTGACCTGCGGCGAGGACCCCACAGTGGGGGCCCGTTCCGAGCCCTTCGGATTCCTGCCTCATCCGCTGGGCTCACCTCCATGCTGCTCCCTCGCAGGGCCCGCGCGGGCGGGCAAAGGGCCTCGATCGTGGGGTCCTTGGTCCTTAAAGGTCGCGTGAGTAGTCGGAGATCCTTCGAGGGATGCGGGCATGCGTGCGGATAGAATCGCCCGACTGCACAGGAGATCGAAATAGAGGATCGAAGGGGAGGCGGGGGCTGTGGTACAAGCGAAGAAGATAGTTCTCTACGTGATATTCGTCTTCGTGGCGTACACGATCATCACCTCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //