Array 1 372223-373128 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022713.1 Blautia pseudococcoides strain YL58 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 372223 33 100.0 35 ................................. GTCAGATATGCTGTCAGGCTTGTCTTTGTCTGCCT 372291 33 100.0 33 ................................. CAAGAGAAGTGTACTGCGACGAGCCAAAGCGGC 372357 33 100.0 33 ................................. TCTATCATTGCCGCCTGTATTTCTGGCGGTAAA 372423 33 100.0 34 ................................. AGATAATGCTATACAATAGCCCAGTTGAATCTTT 372490 33 100.0 35 ................................. TCAGGCATACCTGCACAAGTAATGTGTAAGATACC 372558 33 100.0 35 ................................. TGGTATATCTGTCCACCATGTGTTAGATACCCATG 372626 33 100.0 34 ................................. CGGTGAAGTGGGAAGAGTGCAGCCTGATCAGGAA 372693 33 100.0 34 ................................. ACCTGCTTTTGTAGCATTCGCCTCTGCTTTATTT 372760 33 100.0 34 ................................. GTTTCGTGTATAAAGCCATGTTCAAATAGCCAAC 372827 33 100.0 33 ................................. CATACATTCGTAACCGTAGAGCGAATCCCATTC 372893 33 97.0 34 ...........T..................... TTGCGCTATTGCAAGTACAGCTTCATGTACTAGG 372960 33 97.0 34 ............................A.... CGTTCTGGCTGCAGGCGGAACATAGTGTAATGTC 373027 33 87.9 36 ..T.........A..........A.....T... TCTTGTAAATAGGTAAATATCTGTACTCGGGCAAAC 373096 33 84.8 0 ............A........A.T..A....T. | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 97.6 34 GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Left flank : TAATGGAAAACAACCATCCACCCGTGGAGGAAGCCCAAAAGGAACCTCTTCTGCAAAAACCGGAGACGAAACGCCAATTGGCATGTTTGCGGGAGTTGGAGCACTTGCACTGATTGCTATATTAGCGTGTGTGATCAGCATTTTAAAGAAGAGAAAAAGGGCATAATCGGGAACAAAAATAGAAACTACGCTATTATGTTAAAACATTCTGGCAGTTGATTACGTTCACAACTGCCGGGCAAAAGGGAGAATGCCTTTATATCTTCCACGAAAAAGTTTTGTATAACAGGAAGAATCCTCTGTATATAGATACAGGGGATTTTTCAATGTAGATATCAGGTGCGAATGCCTAGTGAACATAAAATTCAGGGGGGATTCGCACCTATATTTTGATGGAAAAAGTGGAGTATTTGTGGTAAAATAAAATAATAGATATACAAAACTTATAATATTTATGTGAAATTCACAAAAATGGCTTATGGTTTTTGTGAAATGTTGCT # Right flank : TTTTACATATTATATGATAGTGTTCCTCCAAACTGGTCACTCTTCACAAGAACAGAATAACATTCTACCAGAGCATCTGCCGAAGACAAAGACGGCAGGTGCTCTGTTATCTTTATTTGCATAAAACAGTAAAATATTGTTATTAAGATAATTTTATTAGACTATTTGCTGAAATCTGTTATAATACCTTTTAGATGTATTAAGGAGGAAAACTATGCACAACAAACAAAAAAAGAATGCATGGATACCTTCATACGCAGTATTTCCGCTGCTTTCCTGTGTGACGGTAAATTGTATTGTATATTTTGGGATTTCCAGGATCGCCGATGAATGGAAGCATTATGACCTGACGCTGCCTGTTGACAGGGCAGTGCCTCTGATTCCCGGATTCGTATCGGTTTATCTGGGGTGCTATCTTTTTTGGATTATCAATTACATATTGATCGCGAAACAGGGTGAAGAACACTGTGTCCGTTTTGCCGCGGCAGATATTATGTCAA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3331563-3331136 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022713.1 Blautia pseudococcoides strain YL58 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3331562 32 100.0 35 ................................ CTCTTGTGTTGCTCCAGCCGTTGCCGCTGTTGACG 3331495 32 100.0 33 ................................ AATTCCGCCGGGTTTAAGAACTCTGCTGATTTC 3331430 32 100.0 34 ................................ CAAAGCAAACAATGGCCAATATAAAAGAAGGAAA 3331364 32 100.0 34 ................................ CGCAACGCAACATCCCTGGTTTGTCTCTGTCCGT 3331298 32 100.0 34 ................................ CCACCAGAACATTATTCAAGCGCTTGGAGGCCCC 3331232 32 100.0 34 ................................ TGTCTAAATAGACGGAGCATATCATATAAGCCGT 3331166 31 81.2 0 ........-................AG..CGG | ========== ====== ====== ====== ================================ =================================== ================== 7 32 97.3 34 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : GATGAATACCCACCATTTTTTTGGAAGTAGGTGAAGTGATGTTAGTATTGATTACCTATGATGTGAATACAGAGACAGACGCCGGGAAAAGACGCCTTAGAAAAGTTGCCAAACAGTGTGTGAATTACGGAAGGCGGGTACAAAACTCTGTTTTTGAATGCATCCTTGACAATACCTAGTGTGTTTCATTGAAAGCTGTGTTGGAAGATATTATTGATAAAGAAGTTGACAGCCTGAGATTTTATTATCTGGGAAATAATTATAAAACAAAAGTTGAGCATATGGGGGTCGATAAAGGAACGGCAGCTGATTCAACTTTGATTTTCTAGTGCGAATATGAAGTGAACAGAAAAACCCTGGGGGATTCGCACCGGGTTTTAGAGATAGGATGGGTGGATATGGGGATGGTATATGGGGCTAATTGGGATTGGATGATAAAATATGATTGAAATTTGAGGAAGTTGCACAAATATGTAGTGCTAGATTTGGTGGTTTTTGGT # Right flank : TAAATAAAATAATTATTTACCTCCTACCCGATTCCTAGTTGCCTTGAAAGGGTAAATTGACCATGATATTTCATTTAATCTATATTAGTAACCTTTTCCCATTTCCATTTCCACCTTCCCGTCAAATACCACCCAAACGATATCACATAATTAGCCGCCCACCCCATAGGCACAGCCATCCACGCAACCTGAATCCCATACACCGGCGCGAACACATTAGTCACGATCACCCGAATAGACAGATTCACCAGATTAGCCACTGTAAATGCTTTCACATCTCCGGCCCCCCGCAGCAGCCCGTCCGTGGAGGCTTTCAGTCCAATCAAAGCGTAAAAGAACGAAAGGAATTTCACATAATCAAGCCCTGTCTGAAAAGCGGCACTTCCATTTCCGGCATCTAAAAATGCTGAGACAAACACATTCCCAAACAACTGATAAAGAACACATATAAACGCCCCGGCGCTCAGAACCGCCGCATAGCACATCCGATATCCCTTCTT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //