Array 1 2105-1938 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTCN010000057.1 Staphylococcus coagulans strain M615/02/4 NODE_57_length_11193_cov_23.879722, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2104 36 100.0 30 .................................... GAATATCACGTTTAAAAGGGTGGAGGAAGT 2038 36 100.0 29 .................................... ATATACAAAACAATAAAGGGGTTTTGACA 1973 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTTTAGTACTCTGTAATTTTAGGTATAAATGAAAC # Left flank : ATTATATTAGAAATGAAAAGCAATTATTGACAGCAGAGTTTATTGATCACTTGGTGTGGGATGCACCACTTAATTTTGAAAAGCATGAAATTAAACGTAGCTTAGAAAAAATTATTCAATTATATCAAGAGGTCATTGAATTAACACCGAAGATTTCAAATTATAATTTAGCTGATATCATTGTGTTTGAGCCAATAGATATCTATGTTGTCGTAAGATACCTTAAACATGCAAAACAAGAATTTGAATTGGATATCCATTATGATAATTTACCGATTGCTGTAGCGAAATATATCAAAATGTATGATTTGAAGTTTAATAAATAAATCTAAACGCCTATTAAAGGGAAAGGTTCTAGCGCTTGGTCAATTGACTTGTAAATCAATCGATTAATCAAGCGCTTCTAGATTATTTTAAACAAAATTAAACGAAAATTTAAAAATTTCTAGCATAAACTTGCTTATAATAATCATAAAAATAAGCTATAATTATAGCTAGAG # Right flank : ACAGTTTAATGTTTGTTTCTATTCTTGCGAGCTTTAGTACTCTGCAATTTTAAATGAATACTAATCACGGATTGTTATAAAATTTGTTTATAATAAAGACAGAGATGTTTTCTAAGATACCTCGTGCTTTTTATTGATTGTATAGCACAAAAAGGCAGAGAAAAATTTGTGAATGTTTTTAACATTTGATATTAAAAAGAGACAAGAATCTTAATTATGTAGTACTGTAAGTTTAACAAACAAATTAGAACAAATTTTAAAATTGTTCAAGACTCATATAATTCAATATATGAAAAATACAATAATACTAAAATCAATTGACAAGTATTCTTGCTACTGGCAAACGTTGTGACATAAACAATACGGTAGCTTTGTCTATAAAAGTATAAGCTCATTGATGTGAATCTGCTATATACATCAATGAGCTTTTATTTTTAAAGTACTTGTAGAATGAATACACTAAAATTCAGAATTTAATTATTATGTTCAATATTGTTAAT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //