Array 1 15455-12636 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBGK010000040.1 Serratia symbiotica strain HB1 40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 15454 33 97.0 34 ................................A TTAATACCTGTGGTTACCGTTTGTCCCCATTGAA 15387 33 97.0 34 ................................G AGCAATCCCGAGGCGCTTTTGTGACACATACCAA 15320 33 97.0 33 ................................C TCCGCGTCAATGGCGACCATGTTGTTAATGCTT 15254 33 100.0 34 ................................. CTTAGTTGTTTGGTGTGACTACCACGCCGCACAC 15187 33 100.0 34 ................................. AGTACGCCTGGCGACCTCAACAGCCAACTCAGCA 15120 33 97.0 34 ................................A GGCTGAGGCGTACCGCAGCGCAGCGAGGAACGAA 15053 33 97.0 33 ................................C GGTTTAACGTCGTCGGTAACAAACAGAGCGCCG 14987 33 97.0 33 ................................A AGCTATCTGACCTTGGGAATTTCCCTTCTGGAG 14921 33 97.0 33 ................................A TGCAGATTGGGGGCAAGCTCTCAACCCAGAAAG 14855 33 97.0 33 ................................A AGGCCACGGGTAGACTATGACAAAAATGGCCGC 14789 33 97.0 35 ................................G TCCTCAATACGCTTCTGGTCGTTAATCATTGCCAG 14721 33 100.0 33 ................................. TCCTTCAGCCACCATTGGCGGTATCAATTTTAC 14655 33 100.0 33 ................................. TGCTAATTCTTCAGGTGATGAATTTACTAATAT 14589 33 97.0 33 ................................C CCTCCACCAACGGGGAAACAAACGGGGCCATAC 14523 33 100.0 33 ................................. CCTTAATCAATTGATGCCCATCGTCATCTATTT 14457 33 97.0 33 ................................A TATTGATGGAGGCAATCTGGTCGGTCAGTTTAC 14391 33 97.0 34 ................................A AGACTCACGATGACCAGCTAGATCCGATGATGGA 14324 33 97.0 34 ................................A GGTGAGTTCGTACAGTTGATTGCTCATGACTTAG 14257 33 97.0 33 ................................C ATTTGAAGATGAGCGTGCCGTGTGTCCGCAATA 14191 33 100.0 32 ................................. GGCTTGGACTGGGTAATGAAGAGCGTCAGATC 14126 33 93.9 33 A...............................C TTGTCTTAGGAGGGGCCACATAAAGAGGTGACA 14060 33 97.0 34 ................................A GCCAGCTAAACACGCGTATCGAGCGGGCGGAGAA 13993 33 100.0 34 ................................. TGGCCGGAACGTCAGGGGCGGGGAAAACTTGCTT 13926 33 97.0 34 ................................A TTGATTATATTTCTCAGGTTACTGGGAATGATGA 13859 33 100.0 34 ................................. GCCATATGACACCTCCAATGACAATAACAATGAA 13792 33 97.0 33 ................................C TCGCTTTCGCTAATGCTTTCCGACATCTCATCG 13726 33 97.0 33 ................................A ACGCAGTCAGGAATGATTGGCGGATGCCGTCAT 13660 33 100.0 32 ................................. CATCAATAACGTGATCAGCACCGATGATTCGA 13595 33 97.0 33 ................................A GGCAGGGATTGGTCAATAAATCCTGCGGGGAAC 13529 33 97.0 34 ................................C CTTGTCTGCTGCCAGAGCTTGCATTATCACTGTC 13462 33 97.0 34 ................................A GATCCAGCGTTTATTTTTTGACATATTTCAATGA 13395 33 100.0 33 ................................. CAGTAAGGTGACTAATTAAATCAAACATTTTTA 13329 33 100.0 34 ................................. GGATAAGGAATTGACCTTGACGCTAGTATCCGGC 13262 33 100.0 33 ................................. GGTTTATCGGCGTACTCCAAGGCCTCTTGCAGT 13196 33 100.0 34 ................................. CAAATGCTGTACGGGACTCCACGGCATTACCCGG 13129 33 97.0 33 ................................C GAATCGACATCGGATGGTGTGCTGGATAGCGAA 13063 33 97.0 33 ................................C TTACTCGAGGTAACAAACCACAACCTTAAGCAG 12997 33 97.0 33 ................................C GCCATTGTTGACGGTGGTGATGTAACCAAAATT 12931 33 100.0 33 ................................. TTGCCAACGCCAAGGCACAAAGCTGGTGGCGAC 12865 33 100.0 32 ................................. CATCTGTACGGTTTAGCAGGTAATACGGATAA 12800 33 100.0 33 ................................. TCAAATTTCCTCAGTACCTGAACGCCGTGCGGG 12734 33 97.0 33 ................................C TGTAAGGGCCTCTGAGGCGTTTTAAGGCCATAG 12668 33 90.9 0 ..............................CTC | ========== ====== ====== ====== ================================= =================================== ================== 43 33 97.9 33 GTCGCACCCCACGCGGGTGCGTGGATTGAAACT # Left flank : CACCTTATTTTCATCGATGAAGGAATGCGGCCATGATGGTACTGGTGACCTACGATGTCTCTCTGGAAGATCCTGAGGGACCGCGTCGATTGCGTCATTTGGCGAAGATCTGTCTGGACTATGGTGTACGTGTACAGTACTCGGTGTTTGAATGCGAAGTGGAACCTGCTCAGTGGGTGCGGTTTAAGGAACAGCTGTTGAAGGCGTATGAGCCGGGTGTGGATAGCCTGCGTTTTTATCGTCTAGGCAAGGAGTGGCGTGGCAAGGTGGAGCACCATGGTGCCAAACCGGCCTTGGATATTTTCAAGAGTGACCTGATTATCTGAACGCCAACCGGTAGTACTCATTAAAACTCAGGGAGGATGGCGTTTTTCAACTGATTGATAAAATGGATCATATTGAAAGACAGCCTTTCGAGAGTGCCTATTTGTGGTTCCCCTCATGGGGTTGGCGCAGAATAGGGTTCCTCGGTAGACTGTCTCTGCCTTTGCAAGAAGGCG # Right flank : ACGATCGGCCTGCGCCTGTTCTGCGATTGGCTGGTCGCACCCCACAGCGATGGCTGTGCCACCGAAATGGCGAATCTTTTCCACAACTTCATGTGCGCAATCTTCACGCTCCCGGTACCCAATCCCAATACAAACTTTATGTCCTTTGTTTGCCAGGCAGAGGGACGCTACCCGTCCGATGCCACGATCGCCACGGGCCATATCACATTCTCCGTCCGGTTGTTGTCTATCGGCACCCGGCCATCCTCCAGGTAAACCCGTAACGCCACCCACCGCTTCAGTGCATAATCGATAGCTTTGCGTATCCCCGAGTTCGCCGCCGTCTTCTGCTGTTTCAGCTGCCGCCAGCTTTCGAACGCCGCCGACCACGGTTTCGCATAACGCTGACGTCATCGTCGTCGTTGTTCTGCCGGACGTTGCCTTATCCAACGCCCCAGTTTGTACATTTCACGGATAGTGGTTAATGCCGTCTCCGCCACCGGACTGCCGTTTGCCCTGTA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.50, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACGCGGGTGCGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //