Array 1 262749-265220 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVFZ010000005.1 Citrobacter braakii strain CB00130 CB00130_c0005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 262749 29 100.0 32 ............................. ATTTCATTCAACCGGTCCAGCTCGAGCCGGTA 262810 29 100.0 32 ............................. CCGGCTGTGTCCATGATCGCCAAAAACGCAGA 262871 29 100.0 32 ............................. GATAATATTGCGCCACGACTCATAGCGGCTGT 262932 29 100.0 32 ............................. TAAAAGCCCTTCCCTTCAGTTCCTGCGTCAGT 262993 29 100.0 32 ............................. CTGTGACACGGACGGTATCGCCAACACCTCCG 263054 29 100.0 32 ............................. CCGGAATTATATTTTTGGCCCTGAAACGTCAG 263115 29 100.0 32 ............................. TTTTTCCAGTGCCCGGACTTATGCACAACCGA 263176 29 96.6 32 ............................T TACTAAAATTTCTTATTCCGTAGCGTCAGCCC 263237 29 100.0 32 ............................. GCGCTTAGATACAACAACCTGCCGTAATCCAT 263298 29 100.0 32 ............................. ATGATCGGCGGCAGCGATAACACTAGCGCGAA 263359 29 100.0 32 ............................. GTGTCAACCACGTCGCCGAGACCATCCAGTGC 263420 29 96.6 32 ............................C GCAGGGAATATAGCGGCCGGTGAAACTCTCTC 263481 29 100.0 32 ............................. CCAAATGCAAACGGCTCCTTCTTCCGTGTCGT 263542 29 100.0 32 ............................. CCAAATGCAAACGGCTCCTTCTTCCGTGTCGT 263603 29 100.0 32 ............................. CCGCTGGGCTGGCGACCGTCGTGGTTTGCAGA 263664 29 100.0 32 ............................. AGAACGGTGGCGGGTACTGGCTGGGCCGGATT 263725 29 100.0 32 ............................. TCTTTGGCCGCATAGGCTGCATCTTCCATTAT 263786 29 100.0 32 ............................. CCACTCTGGCGCGTATTCGTGCCGGAAAATTC 263847 29 100.0 32 ............................. GTATCATACAATTTCTTTCATAGACCCGGCAC 263908 29 100.0 32 ............................. CAGGAACGCAGATCAGGCAACAAATCGCGCGT 263969 29 100.0 32 ............................. ACAAGCTGCTGTGCCTGTTTAACCAGGTTAAC 264030 29 100.0 32 ............................. TCCGGACAGGGCAACGTGATTACCATTCCGTG 264091 29 100.0 32 ............................. GCTTCAGCATTAGCGGACCGCGGGGAGGATTC 264152 29 100.0 33 ............................. TCACGCGCGGTCACGTTGATGTCACGACAGAAG 264214 29 100.0 32 ............................. GTACGTGATCGACCAGGACGCAGACGGGAACC 264275 29 100.0 32 ............................. AATGATGGTGCGCAGCTCATGCAGCCTGGCTA 264336 29 100.0 33 ............................. CCAAATCTGTCACGAAATCATATTTTCCCCACA 264398 29 100.0 32 ............................. CATGTCGAGAAATGCTTGCAGATTACTGCTTA 264459 29 100.0 32 ............................. CGTCATCCGTCTTTACCCGCGCCTTGCGCAGG 264520 29 100.0 32 ............................. CGATCGTAACGGTTAGACAGCTAATTTGTATG 264581 29 100.0 32 ............................. TCACGATTGAATATTAAATAATCATCAGCTGA 264642 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 264703 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 264764 29 100.0 32 ............................. TCCGCGACCGGTTCCCCCTCCCATATATTCGG 264825 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 264887 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 264948 29 100.0 32 ............................. CCAGGCTCCGCTCGGCAAGGCGTACAACTGGA 265009 29 100.0 32 ............................. GATATGATGTCAGGAAGCGGCGGCGCGTCTGG 265070 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 265131 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 265192 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //