Array 1 8866-7763 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHLX01000048.1 Paenibacillus cymbidii strain R196 Scaffold48_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 8865 33 100.0 34 ................................. CCTACTCCCTTTCGGATGCGATATGTATTACCAC 8798 33 100.0 34 ................................. AATTTCGCGAAATGGTAACGGCGAATCTGCTCTT 8731 33 100.0 36 ................................. CTCCATCATGTGCTCGGCGATCATCTCATCGAGGAA 8662 33 100.0 33 ................................. GGCTTTGTCGGCCGTCGTCAGGGTAACGCCTTC 8596 33 100.0 33 ................................. GAGGGGGAGCGGTACAAGGTTTTTCGAACCTTT 8530 33 100.0 35 ................................. GGACCTTGCTCGCCCTGTATGCCCTGCTCGCCTTG 8462 33 100.0 34 ................................. AATTTGGATCAAATGGGCGAGAAGGACGGCTTTC 8395 33 100.0 33 ................................. CAAACGTAACCACTCCCGATGAAAAGCTGCCGC 8329 33 100.0 34 ................................. GTGGTAAAGGGGAGTGGGTCGCACTCACCTGCAT 8262 33 100.0 34 ................................. CCCTATGTTCCCGATTGAATTTATCGTAGCCGTC 8195 33 100.0 33 ................................. CACATCAAACCCTTTGTTTGAATTATCTCGGGG 8129 33 100.0 35 ................................. AGCACCAACAAGATCGTCAGCGATCGTCGTCGTGA 8061 33 100.0 34 ................................. TCCAGTTGCGTAACATACCGCTCGAGGATAGCAC 7994 33 90.9 35 ...........T.....A......A........ GTATTCACAATATACCATGAATTGGGCATTTACAT 7926 33 97.0 34 .................C............... GATACGGCGAAGCTGGTTAAAGTAATAAGTTCCA 7859 32 84.8 33 ..........T-.GC..A............... GAGCATTGAGTTTGACGGTGAACCTACGCCAAC 7794 32 81.8 0 ..........T.GC..A-...T........... | ========== ====== ====== ====== ================================= ==================================== ================== 17 33 97.3 34 GTCGCATCCCGCAAGGGGTGCGTGGATTGAAAT # Left flank : CTGCATCGAGAACTATATTAAAGAAGCCAAGAACGGCTTCTCTATCGACCGTATTGCAACAGGCGATTTTCAAGCCAATGAACTGGACTTGCTGATCAAGCTCCTTGCCTACAATCTGTTCGAGCGCTTCAAACGTGACTGCTGTGAACCGGTGCATCAGGGTTACACGATTGCAAGGTTCCGCCTAGAATTCTTTCATTGTGCTGCGACGCTCATCCGGCATAGCCGCTCTGTCGTATTGAAGCTTATAAAAGACTTCGCCAGCCGTTATGCCTGGAAACGGATCGAGGCTCGAGTGGTACAGTTAGAATGATGGAAGCAATAATTTTACATGGAAATAGTGGAGGCCTCTTCTGTGGGGAGGGGGAAAGACCATCCGCTACTAGCTCCCGTTCTCACTTGTCCTGGGGAACTCCTACATTTTTACATCTCAAATCACCGTTGCTTTAGCATTTTGCATTGACCTTATGCACTTTCGAAATTCAGGATCAATTCAAGGC # Right flank : AGCCAGCAGCAGAGCGCAAACTGGTTGGATACGGTCGTCGCCTCCCTCACGGATGCGTGGAGCAGGAGCGCGACTTCGAAAACAAGTATTCATTGTGTGAGTGCCACCCGCGACGTAATGGGAGGTTGCACGCAAGAAGTGAATCCACTGGTCTCCCTTCCTATCAATATGGGGAGCGGCGGGCGGCTGCATATCATGTCCTTTAAAATGCTATAATGGTAACAGCAAGCAGAAGCAAGGGGAACGAATCTTTTTATGAGCGAGGAGAAAGGGAATGACGCGACCCACTTTATGGCAACTTTTGCAGGAAGAAATGAAGATGGGGTTGAGAGGGGGACTGTACCATCAGACCCAAATTAAGCTTGCCTACAACTCGAATCGGATTGAAGGCAGCAGGTTGTCTGAGGAGCAGACCCGCTATATTTTTGAAACCAATACGCTTCATACGGATCCCGGAGAACCGGCAAATGTTGACGATATTATAGAGGCCGTCAATCACT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCAAGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.90,-8.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 12491-10491 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHLX01000048.1 Paenibacillus cymbidii strain R196 Scaffold48_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 12490 33 100.0 35 ................................. TCGAACGTCCGCAGCGAATCACTGAACCACTCACA 12422 33 100.0 36 ................................. GTCATCGTCAACATCGATAATGTAAATCCGACGACC 12353 33 100.0 33 ................................. ATGCGAAAATCACGCGTGTATACGGCGCTATTT 12287 33 100.0 36 ................................. GCACCAGACACGGCCAACCCGGCCGACGCGTATCTG 12218 33 100.0 35 ................................. AGCAGAACGAGGACATCACGTATTCGCTCGCTATG 12150 33 100.0 33 ................................. GTTACGATAGTAGTACATTTCCGACTCATTGTC 12084 33 100.0 35 ................................. AGAACAACCGTAACCGCTACATCGAAGGTAAGCAT 12016 33 100.0 35 ................................. CGTCTCCAGGTCATCCAGCTCGCGAAGAACGCGAT 11948 33 100.0 35 ................................. ACGGCACGATTCAAGGAAAAATCGTTTAAGCGCTA 11880 33 100.0 36 ................................. GTCAACAGCGACAAGATTATCGCACTCGCGGGGAGG 11811 33 100.0 34 ................................. AAACTGGTGAGTATTATCGATATGATTTTGATCT 11744 33 100.0 37 ................................. ATCACGCCGGTTCCCGGAGTGCAATGGTATGCCCGGC 11674 33 100.0 35 ................................. TTCCTCCAGCTCCTCAGACAGCCATTGCGACAGTT 11606 33 100.0 34 ................................. ACCCAGAAAACCTCCCCATCAGAACCTCAAATTT 11539 33 100.0 35 ................................. TCTTTCCAAAACGCTATATGTGGCTCGTACGGTAC 11471 33 100.0 35 ................................. TGCATCTGTCCGCCAACCTTGCTCCAAGTTTTCTT 11403 33 100.0 35 ................................. TTGTATTGCTTGACAAGATCCTCCACCTCGCATCA 11335 33 100.0 34 ................................. TATGAGCGCGATCAACTCTTCCGCGGTCAATTGC 11268 32 97.0 35 ..............-.................. CGTCAACCAAGCCATTTCCTGCTGACCCCGATGCT 11201 33 100.0 36 ................................. CTCGAATTAATTGTAAATCTGATGTAGAATGTTATC 11132 33 100.0 35 ................................. CCCAACAAAGCAATGGATACGGAAATCGTAACAAC 11064 33 97.0 34 ..........T...................... CCCGATAAAACCAAATTCGGCCGCGTCGGTATCA 10997 33 100.0 33 ................................. ATTTTCGCTACTCCCTTTCGCCGTTTGATTTGC 10931 33 100.0 34 ................................. AGCTTAAATTGCAGGATACCGTAAACCGGCAAGT 10864 33 100.0 37 ................................. ACAAGAGATTTCGATTTTGATGTCGAGCGCATTACAG 10794 33 100.0 36 ................................. TAGCGATATCGTCGAAGTATCCGTCTCCCCAGATTT 10725 33 100.0 35 ................................. ACATCCTGTCCCGGTATACGCAACCCGGGAGCATT 10657 33 100.0 34 ................................. TCCACTACTTCCCATGCTGCGGATATGGAAGTTG 10590 33 100.0 34 ................................. TCGACAAACGTTGCCACGCTTGAAACGTGCGATG 10523 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 30 33 99.8 35 GTCGCATCCCGCAAGGGGTGCGTGGATTGAAAT # Left flank : TCCTCTGCTCGTGTTGATTACGTATGATGTAAGCACGGTCAGCAGCGCGGGCCAAAAGCGGTTGCGGCAAGTTGCCAAAGTGTGCCAGAATTATGGGCAGCGGGTGCAACATTCTGTTTTTGAATGCGTCGTGGACGCGGCGCAGTTGGCTGCTTTAAAGTTGAAGCTGATTGACTTGATCGATGAAGAGAAGGACAGCTTGCGGTTCTATCAACTGGGCAATAACTACAAGAACAAAGTGGAGCATGTGGGTGTGAAGACTTCGCTGGATATGGAAGGGACGCTCATTTGGTAAGGGATCGGTCGGCGGGAAGACGGTGCGAATCTGTGGTGCGAATGAGAAGCGAACATGATTTTCCGGGGGGATTCGCACCAGGGAATTTACACAAATATCCGGTATATGGATTTTGAATGGATATTGAACATTATGAAGTGATTGTGTTCTTGTGGATTCTACCACTTACGTGGATATATTAGGATGTTTATGGGTAGAATTCGCC # Right flank : AATTTACTGATGGGACAAAATATCAACCTGAATTTCGAAAGTACCGCTCTCTGAGAAAATAAAAAAAGGGCTCTAATCTTTGGTAGAATGGTGTTTGTCCAGAACAACATCACCCAAAGAGAGGAGCACCTATTAGGTGAAGTCTACCACAGCCATTGGCAAAATCAAGTCTGAATTTTCCCTGCAAAACGCAACCAGTTATGGTGGCGTCAAAATCTTTCTGGTCTTTCTAGAAAAAATCAAGTTGGCCGACGCCATGCGCAGCTTCTCATGAGGCAAAGCGCGCAACTCACTCTTTCCCGTTCACCGTATCCTGCTCTATCTCATCGTCGGTTGGATGCTCGGCTGTGAACGAATTTTCCATTTTCGTCGGTTGCAAGGCGATGCGCTGCTGAGGCGCTTTCTCGGCGGCCGCTGTCCGCACCACAGCCTGCTGTACAAGGAATTGATCAGGCTCGGTCGTTCTTGCCCCAATCTGGTGAACGAACTGCGAATGCTGA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCAAGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.90,-8.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 22149-27524 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHLX01000048.1 Paenibacillus cymbidii strain R196 Scaffold48_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 22149 33 100.0 34 ................................. TTGAATATTGCGCCCCAAAGACTGGTTCCACACG 22216 33 100.0 33 ................................. TATACGCAATACTCACAAAAAGAACCGTCGTAA 22282 33 100.0 36 ................................. CACACTCGCAGCGGACCGAGTCCCGGTGTTGGTCGC 22351 33 100.0 35 ................................. CCGTTAGTATCGTTTTTGGCGGTCAGCTTGATATA 22419 33 100.0 34 ................................. CTGCCACTCCCGCAGCGCCTGCCGCACCCGCCAC 22486 33 100.0 35 ................................. TTACCGTGCGGTTGAACGCGCCGTACCAACGACAA 22554 33 100.0 34 ................................. CCAAGATTCGTTTCCACGATCTTCGACATTCGCA 22621 33 100.0 35 ................................. AGGAAAGGTTTAATCTGACCAAGACGCAGGCAACA 22689 33 100.0 33 ................................. CATTTTGACAGTTTTCAATCCAAAAAGCATTGA 22755 33 100.0 35 ................................. CTCGGAGGAAAAGAAGCTACGGATCGGACGTCCGT 22823 33 100.0 38 ................................. TCAGGTCGACCGAGGAAAAAGTCTCAACGTCGATCCGA 22894 33 100.0 35 ................................. TCCCCTTGGTGGACAAATACCAGGTCACTGATGGC 22962 33 100.0 34 ................................. TGCCATGCAAAAACCCCACCACCACTCGTTCCTG 23029 33 100.0 34 ................................. ACCAAACCTTTTGCAGTATCGGCACCAATAAAGT 23096 33 100.0 35 ................................. CTTTCTGGATAGGCGCTTATAATTTGCTTTCCCTT 23164 33 100.0 36 ................................. CCGACTTGGTGCGCCTTCGTTGCAGATGACCATTGC 23233 33 100.0 36 ................................. GCCTACGATAATGTTGGTGTAATACTCGATTTTCTT 23302 33 100.0 36 ................................. TTGTTTCGGGCCGACCACGGTTTGATATGGTTTCGT 23371 33 100.0 35 ................................. TCATGCGGGCGCTTGAGTATTCGCCAGCCGGTTTC 23439 33 100.0 33 ................................. CGTCATTCCACGGCAGTAGAGGACTGGCGCGGA 23505 33 100.0 35 ................................. CAAGGACGGCCAGCGGTCCTACTACCCGGCCAGCC 23573 33 100.0 33 ................................. ACTTTGTTCGACGCGACGCCCAATTTGTCCATG 23639 33 100.0 35 ................................. ATCAAAAAACGTACGCTTGTACCGCGGCAAACTGG 23707 33 100.0 37 ................................. AAACACTTCAAGTCCCCGTTTGACTGTCTGATGTGCT 23777 33 100.0 36 ................................. GCCGGTTGCTTTAATCCGAACTCCTTCTCCATCTTC 23846 33 100.0 32 ................................. TCCGAAAATTACCTTGACGCATCGCTGGCTGT 23911 33 100.0 36 ................................. TCTAACTCGCTCTCGAATGCAAATGCGCCCGGGCGC 23980 33 100.0 36 ................................. ATATATGGAAACGGCCCATTTGTTGCTCGGTTTATG 24049 33 100.0 34 ................................. TCAAAATAAGAAAACTGAACAACCCACCGTTTAT 24116 33 100.0 33 ................................. CGCCGCTAACATTTCCTCGCCCTTTGCGATCCG 24182 33 100.0 35 ................................. GATAGGCGTAGATCGTGCCGAAAATTGCGGCTTTT 24250 33 100.0 34 ................................. AGCATGGTGTCGCCGGTGTTTTTCATGGTCACGT 24317 33 100.0 36 ................................. ATGGTCGCCTATTACGGCAGCAGCGTCGGGCAAGAC 24386 33 100.0 34 ................................. GACAAGACGACGTTCGAGTGCACCGGCTGATGTA 24453 33 100.0 34 ................................. ATGGTCACGTACATTGATCCAGTGACCAATGCGC 24520 33 100.0 33 ................................. CCCGTCGGATAACGTAACGTGGGGATCGTCGAG 24586 33 100.0 35 ................................. CAACTGCTCAACTGGCAGCACGATGTGCTTTGGGA 24654 33 100.0 33 ................................. ATGCTCTCACCTCTTGCGCAATATGAGTCCACT 24720 33 100.0 37 ................................. TCCAAATCATGCTCCAGCCGCGTTACGTAACGCGCAA 24790 33 100.0 35 ................................. CCTCGAAGCGGATATCCGCGACGCCATCTCGGCGT 24858 33 100.0 35 ................................. CTCACCAACGGGGACAAGACGGTTACGATCATCGA 24926 33 100.0 36 ................................. GACCAGTCCAACCTATGAGAAGGTACGCACCGCAGG 24995 33 100.0 36 ................................. GTTAATATCTCAATGATCGAGTCGACAAAAGCCTTC 25064 33 100.0 37 ................................. CGCAAGCGCGGCAGGAAGCTTCGCAGCCGGCAGCACC 25134 33 100.0 34 ................................. ACCCACGACGGCCGCGTAACGTTTGTTGACGTTC 25201 33 97.0 33 ............................C.... TCGACGTATTGGTGCATCTGCGACAGGCGATCA 25267 33 100.0 34 ................................. GCTACATTGTTGGACCGGTTAATTTTATGCTTTT 25334 33 100.0 35 ................................. GGAAGCGACGCGCATGAAGTTGTTTGCCGTCGATT 25402 33 100.0 34 ................................. AATCCATGGACTTGGGTTATCCTCCCGCCTTTAA 25469 33 100.0 35 ................................. TCCAGGATCGCCTTTATCTCCTTTGTCTCCTTTGG 25537 33 100.0 39 ................................. ATGACCCGATATGCCTCATCGTGTAATCGCGCGCGCCGG 25609 33 100.0 35 ................................. AGGACGCCAACGGACGCGGCGCGGTGCATTTCCAC 25677 33 97.0 33 ....................A............ TTCCGGCGCGACTGGTGCAACAGGGCCGGCAGG 25743 33 100.0 36 ................................. GCCGTCTGCTACTCCGACGCCCTATAAGATTCCACC 25812 33 100.0 35 ................................. AAAGACGAGCCTTACACAGCGGCGCGTTGCTTCAC 25880 33 100.0 34 ................................. GACGCCGGACTGTGATATTTGCGCCTGCTTCGAT 25947 33 97.0 35 ..................G.............. TTCGTGCGCCGCTTCGGATTGCCGAAGTAGATGCC 26015 33 100.0 34 ................................. GATATAACCACGCCATTCCGTCTGCACATGCTTG 26082 33 100.0 37 ................................. GATTCGACCGAATCTGCCCGGGCCGATGCGGGTTATT 26152 33 100.0 34 ................................. ATCAATTCGGCGAGGCGATCGGTTACGTTACGGA 26219 33 100.0 33 ................................. CTGAATTAAGGACGGATTTCGAAGCACACCGTC 26285 33 100.0 34 ................................. CCAAAACCTTAGAAACCAACAGCCCCATGATCTT 26352 33 100.0 35 ................................. TCGATCGCTAGGGGCGTGAGCGGCTCGCGCACGTA 26420 33 100.0 33 ................................. GCCATCGATCTGCGCCGACTTGACGCATACGGG 26486 33 100.0 35 ................................. GCCGTACCCCGTCTGAACCATCGTCGCTGCTCCGT 26554 33 100.0 35 ................................. AAAAACGCCTGTGCCCGTCCAGTTACGCCACGGGG 26622 33 100.0 35 ................................. GAAAATATTGGCGCAGATTTAGCGCTGCGCCGCCG 26690 33 100.0 33 ................................. AGCACAACAACCTCATATGTCACCGGCGATTTA 26756 33 100.0 35 ................................. ATTTACAGGAGGACGCCTATCCGGTCATGCAGGCT 26824 33 100.0 36 ................................. AATGAGCTGCACATGAGCGAGCGCAAGTACTACCGC 26893 33 97.0 34 ........T........................ CTGATGTTTCTTGTAGGCGATCACGCCGGCTGTC 26960 33 100.0 34 ................................. AATTGTTGCGCGTAGTTCCGCTGTCGTGTCTGGC 27027 33 100.0 33 ................................. GAAATGATCAATACCACTTATGCTGCATCCGCA 27093 32 97.0 34 ..............-.................. CCTTCGGGGGCCGTGCCCTCAACCCCACAAGTCC 27159 33 100.0 34 ................................. GAAAGAGGGTAGTCCGCTTTGCTCGGAATGTCTT 27226 33 97.0 33 ..............A.................. TGCTCGATCAGCGCCATTTGCTTGGCGTCGATG 27292 32 97.0 34 ......-.......................... GATGGATTGAAACTGACGAACAAAGGTGCCGTGC 27358 32 90.9 34 ........T...........-A........... AAATGGGCCAAGGACAAGGGGATGACGCCGGAAC 27424 33 93.9 35 ...............AA................ GTGGATATGCCGCCTGTGCAGCCAGGACAAATGAT 27492 33 97.0 0 .............T................... | ========== ====== ====== ====== ================================= ======================================= ================== 80 33 99.5 35 GTCGCATCCCGTACGGGGTGCGTGGATTGAAAT # Left flank : GGGCCAATTGTGCAACGAATTGGATGAATAGCTGCCATTCCCGTGAAAATAGAAGCCACGTCGGCCAAAAGCGGTTGCAGCAAGTTGCCAAGTGTGCCAAAATTATGGGTAATGGGTGCTTTTTGAGTGTGCGGTGGACGCGGCGTAACTGGTTTCGTTGAAATTGGAGCTGATTGACCTGATCGAAGAGAAAAAGGACAGCTTGCGATTCTGTCAGATGGAATAACTACAAGAACAAAGTGGAGCATGTGGGCGTAAAGACAGCGCTGGGTATGGAAGGAGTGCTTATTGGGTAAGGGGAGGGCGGTGAAACGCAGTGCGAATCTACGGTGCGAGTGGGAAGCGAACATGAATCCCCCGGGGGATTCGCACCACGAATTTTACATCAATCCCCTATTTAATGGAATACAATTGGATTTTGTCATTATGAAGTGGCTGCTTCTTCTGCGAGTTATACCATTTAAATGGATATTTTAGTAGATTTATGGATATAACTCGCT # Right flank : TTTGACCATGTTGAGTCCGTCGATAGTATCGTCAGGGAGGATCACCCTGATGGTTCTTTGGGTTTGGCATCTAAAAGGGGCTGCTTTTTGCCCCGCGGCCATCGGGGCAAGAACAATGCCGCGTTGGCAATCTGGCTTGGCTGGCAACTGCCAAGCCTCCATCAGAGCTGGACCGATGCAAGGGAAGGCTAGCCTTGTGATGGAGGATCGCCTATCATCGAGCAGACACTTTGCTTCATGCGCACCATTCCCCCATCCGCCAACTAGCACCTTGCCAAATAGGCCATGTTTTCTTGCCTATTTACCCAAAAACGGGCAGCCTCTTCAAAATAGCCAGCGAAATCACTGGCTATTTCGCTTGAAGTGTGGATTTGAAGGCGATCTGGGGCAAATAACCAGTGTTTTCACTGGCTATTTCGGGCGAGCCGGGCGATACGGGGCAAATAGGCCATTTTTCATGGGCTATTTGGGTTGCCGAGCAAGAAATCAGGCTACTCAAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGTACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.00,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //