Array 1 107567-108106 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE352492.1 Enterococcus faecalis WKS-26-18-2 Scaffold17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================================== ================== 107567 37 97.3 29 ....................................C CAAGACCCACAAGCAATGGTATTTGCAAC 107633 37 100.0 29 ..................................... AGGACTTGGAATGGGAGATGTTATCACTA 107699 37 97.3 29 ....................................G AAGCTCTACAATTAGAAAATGAGCAATTG 107765 37 97.3 29 ....................................G TATCTATCCGAAATTTACTAACCCCGCTT 107831 37 100.0 29 ..................................... TACCCATGCCCCAATGTAACCGGCGCCAC 107897 37 75.7 70 ............................NNNNNNNNN NNNNNNNNNNNAGTCATGTTGTTTAGAATGGTACCAAAACGCAAACCTACGACCGCATCACATCACCAGT 108004 37 97.3 29 ....................................C CCTATTACATTCTTCGTATCGCTTGTGCT 108070 37 75.7 0 .....................A..ACAA..T.TC..C | ========== ====== ====== ====== ===================================== ====================================================================== ================== 8 37 92.6 35 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : GTATATCCTCATCAAGTAGTAAATGCCTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAAAAAGTTTGGTATAATAAACGTGAAGAAAAAAAATTAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : CACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTCTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTG # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.43, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 47389-47689 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE352585.1 Enterococcus faecalis WKS-26-18-2 Scaffold675, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 47389 37 100.0 29 ..................................... TTGCATTACGAGAAGTAAACTCTGTTTCA 47455 37 100.0 29 ..................................... TCTTGAAACCACTGTCAGAAGTGAATTTA 47521 37 100.0 29 ..................................... ATCTTCCTCTATTTCTTGTCCCGTTAGGT 47587 37 100.0 29 ..................................... ATGGTTCGTAATAATGTACACAAAAGTTT 47653 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== ============================= ================== 5 37 99.5 29 GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA # Left flank : CATCGTTTCTCTCTTTTTCACTCATACTTAACGCCCACCTCCTCGGAATTGTTCCGCAGATTGTTGGTCACTATAAGCAATTTTTTCTGCAATTTGAGGGAATTTCTCAGCTTGCTTCCAGACACAATTGGTTAAATCCGTTAAGTTTGTTAAAACTTGAGCATTCACTTGTTTGCCTTTGGTCATTCCTGAAACTGTACTTCCTGAAAAGGTTACCTTTGGGGCTTCTAAACGCTCGTTGATACCAATCAACTTTGAGACAGCAGTTTGGGCTGAACTCGTACTTGAAACAATCTTTCCTTCCATCATTGTTCTCCTTTATTAAATTTATTTCACTTAAAATTTAAGATACTTTCATTTTACTAAACTTTGGTAATGAAAGAAATAAAAATAACAAAAAAGGCTACTGGAAACAGTAACCTTTTAGCACTCCTCTTCTTCATTCGAAGATAACAACATGACTCTAAAACCAATAATTATAACATAAATTCAAAATATCC # Right flank : CTCGGAGAATTATTTTTTCTCCAAAGTTTCGTACTCGCATCACTTATCCATAGCTAGATTTCAGTTTAGAATGAACCACTAATCAATAACAATTTAAGCTTTTTCATAACTCAAATAAAAGTTTTCGTCCAAAATATATTGGAATCTGTTCTGGACCACTCTTTGTTCTAAAAACAGGACATCCACATTATTTAAAGAGATATATTCTACCACTTGTTGCACTTCATCCTCTGTCAAATACGTACACGCATTAATAAAAATCAATAATTTTTTCTTTGATAAATAACGATGTACTTGTGTAATTTCCATAACTTTTTCAAAAATCGTATCACTCGTTGTTTCGATTTTGATTCCAAGAGCTTTGAAAAGTTCCTGCACAGTGATGCCATCTTCTTCCAAATCCATTTCATGTTCCAACAATTCATAGCCAATTAATTGACTAATTGTTCCAGTTAACTTCTCAATCATTGATTTGACTTCTGGTTTATCATTTAATTGTG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: F [matched GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //