Array 1 751071-752031 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040414.1 Dolosigranulum pigrum strain KPL3090 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 751071 36 100.0 31 .................................... CCAGTCTGCTTTATAGGGCTATATCCCTTGT 751138 36 100.0 30 .................................... CAGAAGCTGATAAAAGATTTAAACATGCAT 751204 36 100.0 30 .................................... ATCAACATATTCTATCTTGATATGTTCGTG 751270 36 100.0 30 .................................... GTCTATGTTGCGATTTAAATTAGCACGGGA 751336 36 100.0 30 .................................... GTTGAATACCCGAGTGCTTTCATTGATCGC 751402 36 100.0 30 .................................... GATTAGCGTACTTGCATGTGGATAAAATGC 751468 36 100.0 30 .................................... ACATCGAAGAAGATAGAATCAGAGATTTAA 751534 36 100.0 30 .................................... ACAATGCGGAGCAGATCGAACGTACTTAGC 751600 36 100.0 30 .................................... TAAGGTATTTGAGTGGCACTATGATAGTGC 751666 36 100.0 30 .................................... TAAGGTATTTGAGTGGCACTATGATAGTGC 751732 36 100.0 30 .................................... TAAGGTATTTGAGTGGCACTATGATAGTGC 751798 36 100.0 30 .................................... TATTCTGTTTAATATTATTTTTCTGTTAGT 751864 36 100.0 30 .................................... TTATACAAGTGTTGTAACATGTTGGGGATA 751930 36 100.0 30 .................................... GATTCGTTTTGACCAGTTTCCGCCTTGAAA 751996 36 94.4 0 ..............................T....T | ========== ====== ====== ====== ==================================== =============================== ================== 15 36 99.6 30 GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Left flank : GACTAATCAAATTACTGAACTGATTAATGCAGAGGTACTGAATCATGAATTGGATTTAGAACTTGATGAAATTACAATCCAGGAAGTACTTATCGCTTTAGGAGTGAAGATAGAAGTTGATACAGATACACTATTTGAAAAGGTGTTGGAAATTTTTCAAGTCTTTAAATATTTGCGAAATAAAAAATTACTAATACTTGTAAATGCAGCTTCATATTTTACAACCGAGGAGCTTAATGAAATGGCACAGTTTGTCTCATTGTTACAGATGAATGTGCTGATGATCGAACCAAAACCGACTGATTCTGAGATAACACAATATATCCTGGATTCGGACTTCTTTTTAACCATCAAACATGGTAAAATGAAGTAGAAGATAAACTAGAAAAATAGGAGTCGTTCAAAGCTGAAGTTTTGCATGGACGAATGGCGTGATTACGAAATTTTGTGCAAATTTCTTATGAAAATCATGATTTTTTAGAAAAGAAATACTGTGCGAG # Right flank : TGATTGGTCAGATAACTTATGAGTTTTTAGAGTTATAGTGTATTGGTTTTTGATGTAATAATTAATAAAATATATAATCCTGTTTAATCTTCTAGTCAAACTAGCTAATTAAATAGGATTTTTGTTTATTCAGGAGACAAGCTACTTGTGAAGTATTTCCCGTAATTATTAGTCGAAATTGTGGTGGGAATATGCGATAATATAGAGCAAGGAGTGATGGCTGTGAGTAAGGAATTGTTAGTATTGATTGATTATGAAGTGGATGTATTAGATACGTTTCGAGAGATGGCTAGTGAATATCAGTTGGTGAGTGAGTTTGAGGAAGCTGATTTTTCGAAGGTTGAGATCGTACTGGGTTGGGATGAGCGGTTAGTTGATGTGCTTGAGTCTGGTCAGCATCAGTTGAAATGGATTCAGTTATCGACAGCTGGAGTGGATAAGTTGCCACTTGATTTACTAGCGCAAGAAGGTGTGCGGTTGACTTCAGCGAGCGGGATGCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //