Array 1 7022-7797 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000077.1 Nostoc sp. RF31YmG NODE_779_length_17771_cov_27.655901, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 7022 36 100.0 46 .................................... GAGACGGTGCAATATATTGCGCCAGTCGCGAATGCCGACAACGTGA 7104 36 100.0 40 .................................... TTACCTTCTGCTATTTGCCACACTTTGTGGCTTTACTTGA 7180 36 100.0 32 .................................... GGTCTTGCATTGTTCCTTTTCCCAAAGTGTCA 7248 36 100.0 35 .................................... GTTAAGCCGGCCGCGACTGCCTTGAGAGTAATCTC 7319 36 100.0 40 .................................... TATCTGTAGTATCCAGCATACCAGCAGCATTCTTTCGAGA 7395 36 100.0 36 .................................... CATAGTAAAACCACCATGTTTAGCCAGAAGAGGGTG 7467 36 100.0 38 .................................... ACCCACGTGCTACGAGGCAGCTGACATACGACCGGAAA 7541 36 100.0 42 .................................... CTTTTGCTAACTTAAAATCGTCTCTATATGTCTGTGCTGTTC 7619 36 100.0 34 .................................... CTTCAGGAACCCAGAGCGTCCCAAACACTTTCAC 7689 36 100.0 38 .................................... TTTGAGGTTGCGAAGCAGACACAAGTTGAGCCGGGAGA 7763 35 91.7 0 .....................C........-T.... | ========== ====== ====== ====== ==================================== ============================================== ================== 11 36 99.2 38 CTTTCCTAACTCATTACCCCTAACGGGGATGGAAAC # Left flank : TTCACAATCGACGGCAAAAAGCTACTACCCCAATGATTCCGTTGTTAACAGTTGTTTAGCTAGTCTAAATGTTGTTTTTCATACTTCCCTGCTTTTACAAGCGAGTAAGCAAAAAGTAAGCAAAAATTTCTACGTAGTGCTGGAATCGGGCATTGTGAGTAATTTCCAGAGCCATTACCTCGCAACACTTGTGCTCGGTCGCACCTCTGTAGCATCTCTTTTCAGTACTACGTTATTAACTTATTTATTAAATTCTTGACACTTTTAAGTAGCCTATTCTACTCTGTTGGCTAAGTGTGTTGAGCTTATCGACACCACTATTCAGAACCTTGAAAACTGCATAAATTCGTTGACTGGTGTCGATTACTTACACAGCAATGTTTCCAGGCTGTAAAGAGTATCTCTTATTGAGAATTTTCTAGCCGTTATTGACATTAATAAATCTGGTGTCGATTAGGGTATCTCAAACCCTTGCTCTGCAAGACTTCCAAAAGGTAACT # Right flank : CCAGTATTTTGATAACCATAAAAAAGCCCTACCAACCACTTAAGGCTGATAGGTGAGGAAACAGATATTTATGATCTATATACACCTGTTTTTCAATTATTTTTTGGGAACGATAATTAAATCTTCAGAACTGTATCCTTTCTTCCAAATCATCCAAGCGCAAGTACAGGAATCAACTTTACCGTCACCTGTGAAGCTAATTCGAGGCAATACTATTAATTTTGGAGGGTGTTCGGCTAACCATTGTCCACGGTCTTTACATGGTTCAAGGTAACTGAGTCGCAGTAAGAATGCAACGCCTACACTCGCGTACTCATAAGCTTTTGGAAGTATCTTTGATGCGGAATCAAAAGGGGGATTTGTCACCACCCAATCATAAGGTTTTTGGCGTTGCCAGTATTGATGAGTAGTCGCATCATCCTGTGGGTTATCGGCAATATCCGTTGTGATTACAGACAAACCATCTTCTTTAAGCCTGTTTGATATCGCCCCTGAACCGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCTAACTCATTACCCCTAACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 44467-43995 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000045.1 Nostoc sp. RF31YmG NODE_83_length_47602_cov_14.986030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 44466 37 100.0 35 ..................................... AATGCTGAGTTCGCTTGCATATCTGGGCGAGATCC 44394 37 100.0 35 ..................................... AAGCAAAACGATTCCGTCTCTTGCGATCGCGAGCA 44322 37 100.0 34 ..................................... ACAAAGATTGCAAAGAGAAATCTTAGGGTATCAA 44251 37 100.0 39 ..................................... GCAATCAAGACTTGTTGCAATACACAGCGCAGCAAGAGC 44175 37 100.0 35 ..................................... CACGGTGGGCAGATACAGATTGGGAAATTGATAAA 44103 37 97.3 35 ...............................C..... TTAGAATTCCTGATTTTTGGGAAAAAGTAATTATA 44031 36 70.3 0 ........C..T.AA.......G.-..TA..CA...T | T [43998] ========== ====== ====== ====== ===================================== ======================================= ================== 7 37 95.4 36 ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Left flank : AAGAAAAACTCAAAGCAAAACAACGAGAAGCTTTAAAAAATCAGGCCAAAGAATGGCTAGCCAAATTAGATCCATTCTCACCAGAAGGGCTGTGGTTTGAAAGATTTGCTGAAGGATATCCTTCAAAATTAGAAGCGGCGATTGAATATTTGCAAAATAGTTAGTAATTGTAAGATAAAAATTTTTCAATAAATTGAATTCGTCGGTGGCAAAATGGCAATCGATACCAGAGTTTTTTTGTTTGAGTCTGGCGTCAACCAGTAGGTGTTTGAAAACAAGAGTCAAATTTTGCGCCCCAAAAGCTTACTGCCTATGGTTTTGAACCATTTTCCATAGAGTTGGAGGTTGACGCAAACTCCCTAACGCTTACTACACAAGCTTTTGAGTGTATTTTTCTTATGTCACCCTTGACAACTCAATGCCCCAAAAGTTACTTTGATTGCAAGTTGACGCAACTGTACCTTGAAAACCAAATATATCAATGCTTTCAACTCCGGGCA # Right flank : TATTAGTGAACAACAAGATACCCGACTTCTTAAAGAAGTCGGGTATCTGAACCCTTCAATTGTCATAAGTAAGTCGGTACTGATATTTAAAGCTATGTTAAGGAATGTAAATGTAGGGTGTGTTGTCGCGCAGCGCAACGCACCGACACATGAACAAGGATTCAAGGTGCATTAGCCTACAGCATAATACACCCTACTTCAAATTTATATTTCTTAACATACATTGAATTTTTCTCAGCAACTTACTTAAATCAGCTAGAACTAACTATTACTGTTCATCGATTCGATGGCGACGTATTTCAGAAAAATGTTTCACAGCCCATTCATGCATGGCATTGAGAATTGGTTGTAGGCTTTCCCCCAAAGGTGTTAGTGAATATTCTACTTTGGGGGGAATTTGTGGATAAACCTCGCGATGAATAATGCCATCATCCTCCATTTCCCTAAGTTGCTGAGTCAGCATCTTTTGGGTAATTCCAGGTAAGGCTCGCTGCAATTCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 87722-88834 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000084.1 Nostoc sp. RF31YmG NODE_150_length_116435_cov_15.010469, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 87722 37 100.0 36 ..................................... GCATTCTAGAGAAACTTTATTTATTCCCATAGATAC 87795 37 100.0 34 ..................................... AGAAATGAATTGCAGATATGGCTAACATGTTGTT 87866 37 100.0 34 ..................................... CGCGATCGCGTAATCCTGCTGGATTCTCAATAAG 87937 37 100.0 37 ..................................... TTTCTCTAGCATGACGTGAGCTAATTTCCATTTAATC 88011 37 100.0 33 ..................................... TACCTTCAAGTACGGGCCACTTCTTGAGTGTTT 88081 37 100.0 36 ..................................... TTGACGGGGTAGCACAGGAAAAAGTCAGTGTAAAAG 88154 37 100.0 36 ..................................... AAAAACGTCTGTTTTTATGTTTGGAGAAAACAATTA 88227 37 100.0 34 ..................................... GACGGTAAATTTCAATCGCCGCCCCAGATTCTTC 88298 37 100.0 34 ..................................... ACGTTCCTTGGACACCTACCCAAACCACCCCATT 88369 37 100.0 33 ..................................... AGGGGATGAATGATAATTCGTTGCCAGATTTAC 88439 37 100.0 38 ..................................... TCAAAACAGAGAACATCGAACCTATCAGTGAGCTTCTG 88514 37 100.0 33 ..................................... TCAAGTACACCCATTCAAGTAACTATTGATTTT 88584 37 100.0 34 ..................................... CGCTGGTAACGCACCCGACATTTTCACCAGACTG 88655 37 100.0 36 ..................................... ACTTGAATTTCATTAGCAATTTCATATTTACTTGGA 88728 37 100.0 33 ..................................... CTCAAGGTAACTCTAAAAGGAATTGGTGACAGA 88798 37 91.9 0 ................................AC..T | ========== ====== ====== ====== ===================================== ====================================== ================== 16 37 99.5 35 GTTGAAATACAATAAAATCCCTATCAGGGATTGAAAC # Left flank : GGTAGAATTACAGGTATGACCCGTTATGCTTGTTTTTGGGTAGAAAAAGGTGAGATTATCGCCCCCATCGAAAACTTACGTTTTGATGAAAGCCTCTATCGCTTTTGGGGAGATAATTTACTAGATTTTACCAATTTTCAAGAATTTATCCCCGAAGTCGGAACCTACGAAAGCCGCCAACTCGGAGGCAGTCTTGTTCCAGGAATGTTGGTAAAAGATTTTACATATACTTTATAAGTAACTACGGAATTGCGTCAACCAGTAGGTGTTAAAGAAACGAAGTGCAAAATTTTAGCTGGATTTACTGCTGCATCAAGGTTTGAGCCTTATTGCTCAAAAAACAGGTTGACGCAAACTCTAGAATTCAGGCTGGGAAAGGATTTCAGAAAAAATATTACCTTATCTCTTGACGATACCTAGCGCTGGAATGCTAACATGACTCCAGATCGACGCCACTGCACCTTGAAAACTAAATACAGTTTGCCTTTCAACACCGGGCC # Right flank : TAAAAGTTTGGCTATACTATCTATTTCTGTAAACTTCATTGATGAGAATATCTTTAACACTGAAGTAAATAATTAATATAGTTAATAAAAATTGGGCAAATTGTAAAATTGGATCTAATCGCCATCCTTGAAAAACAAAAATAAAGCCACACAGCAACATGACACTTGGTATCAAGAGTGCTTGAAGAATATAAATAACAAAAGTTATACTATTAAGCCTGTTAGCACGTCTAAATAGCAAAAATACCATATAAATCATATACAATATACCGAAAATTATATATAGTATTCCCAGCAAGCTAGCTGTATTTAAACCAAAATTAACTTGCATAAAAATTAATGCATTTAAAATGGCCATCTTAATATTATTCCTCAGTATTTAATCACTTTATCTATTGCTAGAGTTGGTTTTAGTTACGTTGTTTAGATTCCCGACTTCTTGAAGAAGTCGGGAATCTTTTAAATGTTAAACGTGAATTAAGATTACGTTTGCTTTATTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATACAATAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 12611-12140 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000070.1 Nostoc sp. RF31YmG NODE_112_length_29361_cov_14.992201, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================ ================== 12610 32 96.9 44 T............................... GAAGCATTATCTATCCAGTGGGGTAATGCTAGATTCTTAAGTTA 12534 32 100.0 39 ................................ AATTCTGGGTCAAAAGCGACTTGCAATTCAAATTGGTTA 12463 32 96.9 41 ............T................... ACTCATACTTGCAACTTATCAGTTAAAAAATTAGTAAGTTC 12390 32 96.9 44 ................A............... CCAAACAATTCTTTTGCCAAATCCCTAACCTTGGACTGTGGTTG 12314 32 90.6 41 .............T...T.............T GTTATCGTTGCCACTGGTAATTGATTTGTATAGTAAGATTA 12241 32 100.0 39 ................................ GTCTCACGGAAAGTGACGCAGCCTAGGTTATCCATCGGA 12170 31 75.0 0 TA.....TT..T...............-..TG | ========== ====== ====== ====== ================================ ============================================ ================== 7 32 93.8 42 CGCTTACACTTCCCCCGCAAGGGGATGGAAAC # Left flank : GCGTTCTAATAATTACTATCTGGAAACTCACAAAAAAGCAAGATACTTATTTTACGCCCCCACTTGAATTTGAGCCTCACACTACAGCAAAATTAGGATATTAACGCTTTTATTAGTTAATTTGGCACTTTTTAATTCTTCACAATCGCTGGGTTGACTAGCTCGGGTAATTTAGCTAAGTTATCTTTGTTGCAAAATTTGAGCTAACTATTTAAGTGCTTTCTCTATAATTGAGAAATCAGAACCTTGAAAATTCAATAAATACAGTAGTTTTCTTGGGTAGGTTTCCATACTACCCAGGAATAAAAAATCGATTGTGCGACCGATTCGGCAAATCGCTGAAAAGCTTATTCTTTCGTTTAATCGGCCGTTGCTTTATCCTGTAAGGCTTTTAGAGATTTTTGCTTTCTATTTTTATGGCTGGAGAGAGACAAAATTCGTATCCGTCGCAAACCGCCTCTAGAATCTATGCAGGCTAAGGCTACCAAATCGAGGGGTTC # Right flank : GGACTAATTTGAGTAGGAGCTAATACTATTTACCCAGATTAGACGATATCTAAAATGGGGAATAACTGTCTTGATAATAGGCAGAGAGTAGATGGCAGAAGGAATAATAGCAATTGCACTTGCCGAAATGGCAATTGAGTACTCCGAAACGGTAATTGTAGTATGCAAAATAGCAACTGTAGTATTAAAAATGGCAATTGAGTACTCCAAAACAGCAATTGACGACGCCAAAATAGCAATTGTAGTATGCGGACTAGCAAATGTAGTGTCTAAAACGGCAAATGTAGTATACGAAATAGCAATGGAGTACTTTAAAATAGCAATTCTGACTCCCGAAATAGCAATTGCTGCTGCAATCCATTAATAGGGCATCATTTCTTGTGCTTTTTAGCTTCAAAATCAGGAGAAGACAAAAATTTTCCTAATAGACTCGTGTAATTTAATACCTAATTTTCTAGCTAAAAAATCTATTCTGCGGTCAAATTTAACTCTGGCAAAGT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCTTACACTTCCCCCGCAAGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.80,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 160105-161510 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000025.1 Nostoc sp. RF31YmG NODE_219_length_161618_cov_15.168323, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 160105 37 100.0 34 ..................................... ATAGATTTGCCTATGCTTGTACGGCACCCCGTCC 160176 37 100.0 33 ..................................... CAACCACTCTTTACCTGGACGTATGGCGGGGCT 160246 37 100.0 33 ..................................... TTCCAAGAGACTCATATCCATAGCCTTAGAAGC 160316 37 100.0 34 ..................................... GGATTTATCGAGGGACTAGCCAATAAAATTAAAG 160387 37 100.0 35 ..................................... ACTCAAAGTGAGTTTGAAATAGCTCAAAAACTATA 160459 37 100.0 35 ..................................... TTCAATATATTTAAGAACTAATTTAACCTCTGAAT 160531 37 100.0 37 ..................................... TTAACTGCGTTACCCCTGTTAGCACCGAAGTAATAGC 160605 37 100.0 37 ..................................... GAAGATCCGCTATGTAATGGTTTAGCGTACCGTAATT 160679 37 100.0 33 ..................................... AATGAGCGATCTAGCAAGTGCATACGAGGTTGA 160749 37 100.0 40 ..................................... GTTGGCGATCGCGTCTTGAGTATCCACAGCGACCATTGCC 160826 37 100.0 34 ..................................... CTGGGAATTTTTCCCTTAGCCCCTATACTTAATA 160897 37 100.0 33 ..................................... ACAACATAGTGACCATCCCACACAAACCCTTGA 160967 37 100.0 33 ..................................... ATGGGCAAAATATCCGCCCTTATTTAGCCCTAT 161037 37 100.0 34 ..................................... TTTGAAAAAGGTAAAAGACAAACAAGATATTGCT 161108 37 100.0 36 ..................................... ACAGTGAATCCAATATTGAGTAAGCATCCTAAATTG 161181 37 100.0 34 ..................................... GATTAGAAGTGAAGCGGTGCCGGATAGATAATGA 161252 37 100.0 36 ..................................... AGCTAGAGATGCTTCTATTCAGCAAGCAGTAGCAGG 161325 37 91.9 38 ...........C.AA...................... TTGAGAGGATTGCGTCTTAATTTCGGATTAGAAACCCA 161400 37 91.9 36 ...........C.AA...................... TTGGAAGAACACTTTAAGAACTACATTCGCCGTCAG C [161421] 161474 37 97.3 0 .......................A............. | ========== ====== ====== ====== ===================================== ======================================== ================== 20 37 99.1 35 ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Left flank : GACAAAGTAATCATTGCGGTCTGACCAAGCTTGTTGCAACGACCGAATTAAAACATTCATCCCAATGCGGTGGCGATTACTTTCCAAAGGTTCTCCGTCATCAAATATTAAATCTGTTGGTGGTGGGGTAGGTTCCCAGTCTGGGACAGGAGGCGCTGGGGAACTCTGGTTTGGAGTAATGTTAGTTGTCATAGCGTAACCTGATACATTTACACGATATTTGTCATCTGTCCTTTGTCCTTCGAGTCTGGCGTCAACCAGTAGGTGTTTGAAAACAAGAGTCAAATTTTGCGTCCCAAAAGCTTACTCTTGGCGGTTTTGAACCCTTTTCTACAGAGTTAGAGATTGACGCAAACTCCCTAACCTTTTCTACAGAAGCTTTTGAGCTTATTTTACTCATCTCACCCTTGACAACTCAATGCCCCAAACGTTACTTTGATTGCAGGTTGACGCAACTGTACCTTGAAAACCAAATATATCAATGCTTTGAACTCCGGGCC # Right flank : TCGCCATCTCCCAATCTTCTAGATACCGCTCTGCCTTCGGTAATTGCAATTAATTAAATTGCGCAAGCCATGATATTTATCGGTGCGTTAAGCGTTGCTATAACGCACCCTACTGGACTGTCTAGGCTAAAATGTTGCATTAGGAACACCTGATTCTTGGGGTT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 111479-110360 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000112.1 Nostoc sp. RF31YmG NODE_229_length_214677_cov_15.142750, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 111478 37 100.0 40 ..................................... TTGCACAAACTTGCTTGCCAATGCTTCTTCGATGGTTAAC 111401 37 100.0 34 ..................................... AATTTTGAAATACCAAGAACTGGAAGAATGAAAG 111330 37 100.0 35 ..................................... GCTGCCGAAACCTTGGAACGGATTGATGCACTAGC 111258 37 100.0 33 ..................................... CTCATAGACTTCTGAGATAAATACTGAGGTACT 111188 37 100.0 36 ..................................... CTCAGAGACATACAGACCTGCAAAGGTGGCTTCTCT 111115 37 100.0 36 ..................................... TTACGACGCCGATAACAACGTGCTGAATCATGAAAA 111042 37 100.0 33 ..................................... ATAACCGTACGATGAAGTACCAAAGCTGATAGA 110972 37 100.0 38 ..................................... TTAAATCCCTTTGAGGAGAGCCATGTAAATCTATCAAA 110897 37 100.0 35 ..................................... TCGGCTTCTACGCGTGTAGGACAAATATCTGTGAA 110825 37 100.0 36 ..................................... GTAAATCTTGCATTTCTTAGAAGTCGTTAGGCTTAA 110752 37 100.0 33 ..................................... AGAAAAATTTTTAATCAACTTTCAAAACCTTAT 110682 37 100.0 35 ..................................... CAGTTTTAATATTGTTATCTTCTAAATAACTTAAG 110610 37 100.0 34 ..................................... AACTGGCTATCAATTGGGCCAGTGACCCTGTTAA 110539 37 100.0 33 ..................................... TTGTTCGATCGCTCGAAGATGAGAAAAATAAAC 110469 37 97.3 36 ....................................A AACAGTGCGCTCCTAAAAGTAATATAAGGTGTTAAG 110396 36 75.7 0 ...C..CC......-....T...AT........G..G | T [110385] ========== ====== ====== ====== ===================================== ======================================== ================== 16 37 98.3 35 ATTGCAATTAACAATAATCCCTATCAGGGATTGAAAC # Left flank : CAGAAGACAAACGCCGCACGAAAATCCACAAGGTTCTCAAATCTTATGGACAGTGGATGCAGTATTCGGTTTTTGAATGCGATCTGACACAAACTCAGTATGCTAAACTGCGATCGCGTCTGTCTAAATTAATTAAGCCAGACCAAGATAGCATCCGTTTTTATTTCCTCTGTGCTTGCTGTCAGGGAAAAATTGAGCGCATCGGCGGGGAAATACCAATCGACACCACAGTGTTTTTTGCCTAAGTCTTGCGTCAACCAGTAGGTGTTTAAAAAATAGAGGCAAATTTTACGCCCCAAAAGCTTACCTTCTCTGGTTTTGAACCTTTTTCCGCCTATTTTGAGGTTGACGCAAACTCCCGAATCCTGTCTACACAAGCTTTTGAGCTTGTTTCTCTAATGTCACCCTTGACAAATCAATGCCCCAAAAGCTAATTTGACTAGAGGTTGACGCAACTGTACCTTGAAAACCAAATATATCAATGCTTTCAACTCCGGGCG # Right flank : GTTGATGATATTTAGCTTACAGAGAAAATTTAAACTAAAATTCGGTTAAATCTCTAATTATGGATTTCAAAGTATTTGAGTTAAAATTCATCACAATCCCTATTAAGGGTGATAATTTCTAACTAAGTATTACTACTGAGACATAATCTGCTATAAGCTGAATAAATGAACTACGAAACAGCTCGCAAAATTCTTATAGACCAAGTATTACCAACCGAGGACAACCCAGATTCCTTGTTAATGCGTATGAAGCAGGGAAAACCGCCAGTTCCTGGTCAAATCACCTCGATGTTGTTAGCGTTAAAAGTGGTGTTTGAATCTCTCAAAGAAGCCTCCACTCTCGATAGAGACTTAGCTTTTGCACTTTTTGAGTTAAGTATTAAGACTCAACAGTTATTTGCCGCAGGACGCAAGGCTGGAGTTGATTGGCCGCCATTACTTAAAGAAGATTTGCTACGAATTTCTCTAGCAGCTGAAAGTATTTTTTCTGGTACATGGCA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACAATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 43441-44918 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000133.1 Nostoc sp. RF31YmG NODE_252_length_140629_cov_14.658172, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 43441 37 100.0 34 ..................................... GGGCATTAGACTGGCGTAATTCGTTTACTTGAAC 43512 37 100.0 36 ..................................... CAACTGAGCATATACCACAGCAGCGCTTCTGGGCAG 43585 37 100.0 34 ..................................... TTATAGATAATGAACCTGACATCCCCTCAGCTTA 43656 37 100.0 34 ..................................... GGGACATGGGATGGTACAAGGTAAATCGTTCTTA 43727 37 100.0 37 ..................................... GAAGGTGGAACTCGAAGACGCAGTTTCTCGCCACGGG 43801 37 100.0 34 ..................................... TTCGGTTTGAGCACCCCCTGGTTGGTGATTCTTT 43872 37 100.0 36 ..................................... TCATCTTAGCCCTGTTAACCGCCATGATAGCGTCTT 43945 37 100.0 36 ..................................... TATTTGCCCAAGAATATGAGGCATCCTTTGTAGACT 44018 37 100.0 34 ..................................... CAATTTAGGAGAACAACACGCATTTAACGAGATA 44089 37 100.0 35 ..................................... CTTATCTGGTAAAGCTAAGTGGTTAGCCCGGTAAG 44161 37 100.0 38 ..................................... GTGCATCAGGATGGCATCGTTGATTAAAAAAGTTTTGG 44236 37 100.0 34 ..................................... GTTGGTGAAGCTAGCAAATTTCCGTTTACATATA 44307 37 100.0 34 ..................................... TTATATGTATTTTCATTATTGAACCAACTGATTC 44378 37 100.0 34 ..................................... AGGACGGGATCTAGCAAAAGCTAGATCCTGAACT 44449 37 100.0 37 ..................................... TTGAGCCACCCGTTGAACGAGCATTTCCCCAAGTTCT 44523 37 100.0 34 ..................................... TAAAAAAAATAGGATCACCCCAGGATCACCCCAA 44594 37 100.0 33 ..................................... TTGTCACAAGTAGTGGCACGACTATTAAACTAA 44664 37 100.0 37 ..................................... AGAAATTATCGTCTTTCGTGTCACCAGGATTGAGAAA 44738 37 100.0 37 ..................................... TCACCAGGATTGAGAAACACCTGGATGAGCAGACAAA 44812 37 100.0 33 ..................................... CACTGAATACCGTTTTCTGTAGTCTGTTCAAAA 44882 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 21 37 100.0 35 ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Left flank : TCGATATGCTGTCTCGAATTAGCGATCGCAAAACACCCGCACGTCCCCGATTAGGTTGGCGAGCAGCACGTATCACCGTGGGTGAACCAATTTCGGTTACAGAACGCTGGGCAAATTCTCAAAGCGATCGCCAAGCATCTCGCCAAGCTGCAAGCCAGTTAACACAAGATTTGAAAATTGCTTTAGAGCAGTTAATAGGTAGTTGATTTCACTATTAGTTATATTTTCCCAGTGTTTCCCCCTTGAATCTGGCGTCAACCAGTAGGTGTTTGAAAACAATAGTCAAATTTTCCGCCCCAAAAGCCTACTGCCTCTGCTTTTGAACCCTTTTTTACCTCTATTGAGGTTGACGCAAACTCCCTAACCCATGCTCTACAAGCCTTTGGAGCTTTTATCCAATGACACCCTTGACAACTCAATGCCCCAAAAGCTACTTTGATTGGAGGTTGACGAAACTGTACCTTGAAAACCAAATATATCAATGCTTCCAACTCCGAGCG # Right flank : CTTATAGTGTCAAAAAACGAACAAGCTTCTCCACAGCGGTTACAAGACAGGGTAAAGTACAGACAACTGACTTTGAAGTAAGCACAAAAGGAGCGTGTATACAGATGGGGAAGGGTAGGTTAGAAGCATTTAGTGATGGCGTGCTAGCCATTATTATCACTATCATGGTGCTGGAACTGAAGGTGCCGCATGGTGCCGATTTAGCTGCTCTGCGTCCGCTAATTCCGGTATTTGTAAGCTATGTGCTGAGTTTTATTTACATTGGCATCTACTGGAACAACCATCACCACCTACTCCAAGCAGTCCGGCACGTTAATGGACGTATTCTTTGGGCCAATTTACATCTGCTGTTCTGGTTGTCGCTAATTCCCTTCGTCACAGGCTGGATGGGCGAGAACCATTTTACTGCTTGGCCGATAGCTCTTTATGGTACGGTACTGTTGTTCTGTGCGATCGCTTATTTCATCCTAACCCTGGCTTTGGTTGCTCATCACGGTAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 1823-133 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000135.1 Nostoc sp. RF31YmG NODE_260_length_15934_cov_16.185577, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1822 37 100.0 33 ..................................... ATGAGGGAAGTTCTCCATTACACGTTGAATCAT 1752 37 100.0 33 ..................................... CAGCAATGCAATGAACATTAAACTTTGATGTGG 1682 37 100.0 35 ..................................... ATCATAAACGTCGTGGTTCAGTGCGTTGTTATCGG 1610 37 100.0 36 ..................................... TTTGGTATACCACTCACCGTCTTTCTGGATAGCACC 1537 37 100.0 34 ..................................... ATTTAATGGTCTGTTGTACTACTCACGTATCTGG 1466 37 100.0 34 ..................................... TGAGAATACTATTCTTTAATGTTTGACGATCTTA 1395 37 100.0 35 ..................................... ACAATCACAGATCGAGAAGCTCAAGGCGCAAATTG 1323 37 100.0 36 ..................................... TTGGAAACTGTAGACGATCAAGGAAATATCACTGAG 1250 37 100.0 35 ..................................... AATTACAGTACCGGGGATATGGCGAAATATTTTAA 1178 37 100.0 36 ..................................... TTCAATTAGTCCTGTAGTACCTGGTTGATACCCCAG 1105 37 100.0 36 ..................................... TCATCCACAATCCGCAGTATTTCACAGATTGCAAGA 1032 37 100.0 33 ..................................... TTGCAGAAACTCCGTTGGCGCGCTGCGTTGAGG 962 37 100.0 35 ..................................... AAGGCAACTTCTAATCTGTGGTATGCCGTAGTGCT 890 37 100.0 35 ..................................... ATAAGTTCGCGCCCGGTACAACTTGGCACAAAAAG 818 37 100.0 34 ..................................... AACAAATCCAACATAACGAGCGTGACAGTATCCC 747 37 100.0 35 ..................................... TTTAATCCATCTTCTTTAGTTTTTAATGCAACAGA 675 37 100.0 35 ..................................... AAAGATGGTTTATCTATTGCTTTTAAAGCTGAAAA 603 37 100.0 35 ..................................... TCGATTAATTGCTGTAAATAAGCTTCTTTATTAGC 531 37 100.0 34 ..................................... TATTAAACTCGGTCGGCGTGGCCGCAAACCTAAA 460 37 100.0 35 ..................................... ATTTGATGGACACTCTCAGTAGACTAAATATCTAT 388 37 100.0 34 ..................................... TGAATGAATTAGATGGAATCGTAGAGAACTTATT 317 37 100.0 37 ..................................... ATCGCTAATTTGAATGCAGGGAATTTCAGCCTCGAAA 243 37 100.0 37 ..................................... CAAATCTCCGCTTGATGCATAGGAAGTAAAATCGAAA 169 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 24 37 100.0 35 ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Left flank : CACGCATTAAACTGTCGTTTACTCTTAACTCAACATTGCGCTTAATAATTTGCACTTTTTTGTCTCCGTGTCATGCCTGCGTTCATTAGCTTCTACACAACTGGGTTAGAATTGAGAACAGCTTGCTGCCGTTAGGAAAAGGAAGCATCCTTTCATTATTTCTCTTTCTCCCAGAATGGAAGAGTAATTTTGGAACAATTTTATCGAGTTGCTAAAATATCCCCTTGTAAAGCTGACGGTAAGATAAGCTGGCGTCAACCAGTAGGTGTTTAAAAAATCAAGAAAAATTTTGCACCTCAAAAGCTTACTCCCTCTGGTTTTGAACCTTTTACACCAACTTTGAGGTTAACGCAAATTCGCTAACCCTTACTACACAAGCTTTTGGAGTGATTTTCCTCATGATACCCTTGACAACTCAATGCCCGAAAAGCTACTTTGATTGGAGGTTGACGCAACTGCACCTTGAAAACCAAATATATCAATGCTTCCAACTGCGAGCC # Right flank : CAAATTAACTAGATCTTGTGGCTCTCCCAGACTAGATATGATAAATTAGTAGCAAAAATACCAATTGAGTAAAATTCGGCGTTGCATAATAAAGGGATGAATTGAGGTGATCTACTGTGCAATGTCCATACTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 56114-57298 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000149.1 Nostoc sp. RF31YmG NODE_291_length_62693_cov_14.977334, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 56114 37 100.0 38 ..................................... AAAATCTGGACAAAAGTAAAATCTTTCAAAAACAGGAC 56189 37 100.0 34 ..................................... ATCATGCTGCTTATACAATGGCTCAGACCTCTAA 56260 37 100.0 34 ..................................... CACCTACCAAACGGGGAAACCAGGCTTTTACTAT 56331 37 100.0 34 ..................................... ATTAAAACTTTGGTGCCATCGCCTCCATCGGCAG 56402 37 100.0 34 ..................................... ATAGGAAGCTATGTAGCGGGTAAAGAGCCAGCTA 56473 37 100.0 35 ..................................... ACGTTGCCTGAGACCGTAGTAACTCTACCTAACAG 56545 37 100.0 34 ..................................... GCCAAACATTAGCAGAACTTCACCAAGCGATTGG 56616 37 100.0 34 ..................................... AAATAAGATACTAGACAGACATGAGGCGATCGCT 56687 37 100.0 37 ..................................... CTATCAGATGTTAAAAATGGTATACATAAGGCTCTAG 56761 37 100.0 33 ..................................... ATCTAACTGTACTGTGACACTATCAGACCCTTT 56831 37 100.0 36 ..................................... AAAGATATTTACAATTATGTTATTTATTTAGCTTAT 56904 37 100.0 38 ..................................... ATCTTATTTTTGCACTTGCCATTAGTCTAGTCATTTGT 56979 37 100.0 34 ..................................... CTAGAATCTTGATTTCGTTGGAGCCGAATCCTAA 57050 37 100.0 37 ..................................... GCTCGATTATCTACAGCGAAAATTTAGAGACAGATAT 57124 37 100.0 33 ..................................... GGTGTACCTCCAGCTAACTACACTACACAAGGA 57194 37 100.0 31 ..................................... GATTACGACGATTACAAACGCCTTGCTTTGG 57262 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 17 37 100.0 35 GTTCCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Left flank : ATTGGCACATAGCGGTTTAATAACTGTAACGGTGCGCCACAGCTATTACAAAATTTGTTTCCCCAAGGTTGAGGATAGGGACGTTGACAATCAGGATTTATGCAGTGAACCGCACTCTGAGTGATGTGGGACACAACCGCTAAAATACAAAGGCTGACTTGATTTTAGCGTTTCTTGAGATTTCTGGAATTTATTGATTTCATCGGTGGTAAACTGCCAATCGTTACCACAGTGTTTTTCGCTTGAGTCTGGCGTCAACCTGTAGGTGTTTGAAAACAAACAAAAAATTTTGCGTCCCAAAAGCTTGCTCTTGCTGATTTTGAACCCTTTTTGCAAAGTTTGAGGTTGACGCAAACTCCATAACCCTTTCTACACAAGCTTTTGAGCTTGTTCTACGCATGACACTCTTGACAACTCAATGCCGCAAAAGCTACTTTAATTGGAGGTTGACGAAACTGTACCTTGAAAACCTAATATATCAATGCTTTCAGCTGCGGGCG # Right flank : CATTAGAATTGCTATAGTACTACTGGTTATGCCCATCCCAAATCATCGGGAAATCATAATCTGAAAATGTAGGAAAATCTTGAGAATTACTGCGGCTTTCTTCATCCAGCACTTTGACAACCTTGTTATACATATCTTCCGCCTGTTGTAGAGAATCACCAATGCTAGTTAATCCCAACTTGCCAAATTGAGAAAGACAACCCATGAGATGAAACACCGTACCTGTTTCAGTGCAGCTATCAAAGTGCAATCTGTGGTGAGCAATAATATCCATTAAATCGTTGGGTAATAATCCCTGATAACGGTCTTTTTGTAAGTTGTCGGTGGCGATGTAGTATTTAGGACGCCCTTGTTGACTGTAAAATAACCCCGTAGATAGGTCATAGCGACCGTTCGTTAACAATTTCAGGGTCATGAAAGGATGAGTAGTGCCACCTTTGCGCAGATTAATTTCGATCGCCTGAATATCCCACTGTCCATTTTCCTGTTCAACGGCGATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 93041-91006 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000076.1 Nostoc sp. RF31YmG NODE_355_length_113425_cov_33.934830, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 93040 36 100.0 35 .................................... ATTAATTCGCCAGGGTTAATTTTTTTAGCACCTTT 92969 36 100.0 36 .................................... TACAGAAGAAGCTTGCTACTTGAGCAGCTACCCTCT 92897 36 100.0 37 .................................... ATAAAGGAGGAAATAAAAACCGAAGAATTTCCAGATG 92824 36 100.0 36 .................................... TCAAAACCTAACTGCTTTTGTTGCTGATTAATTTGT 92752 36 100.0 34 .................................... TCTAAAAAAGCTAAAATTAATACATAGGTACTTA 92682 36 100.0 35 .................................... AATATTTTCCGCATCTACGGCACTACTCCAAAAAC 92611 36 100.0 36 .................................... TTTCTAAATCCTCAATTTGATTACTGGTTCCTTGAT 92539 36 100.0 35 .................................... GAGTTGCTATTGCAGCAACTCACTTTGTACAGTAT 92468 36 100.0 36 .................................... AATAAATGAAGGCTGGCTTACCTTTTTCGTTTTCTT 92396 36 100.0 35 .................................... TGAGTCGAACGGGGTTCTTTTCTAGGAACACTCAT 92325 36 100.0 35 .................................... TTTGAGTTCAATTCTTCACTCCCCCAGCCACCCCA 92254 36 100.0 34 .................................... AACAACATGGGCGATCGCCAAACTGGAGAGATGC 92184 36 100.0 35 .................................... GTTACAATGTCATCCCTGGTCAAGATGACAAAGAT 92113 36 100.0 34 .................................... AGACAGATTATGTTGTTTCCGCCCAAGCTGCTGA 92043 36 100.0 34 .................................... CTAACGTCACAGTGCCAGTAGCAGACAGTAATTG 91973 36 100.0 37 .................................... GATCGTAATCAATCGACTTAGTATCTCTAGATTGATA 91900 36 100.0 36 .................................... TTTGCTCAATTGCTAGTTTTATTTTAAATGCAGAAT 91828 36 100.0 37 .................................... AACCTCAAGATTTAATTGGACATGATGAAACTGACGT 91755 36 100.0 37 .................................... TTCCAATCATTTGAAACAATATTTAAACCGCTATTTC 91682 36 100.0 37 .................................... CGCTTTTTGGGGTAGCCTTTGGGGAGAGTATCAAGAA 91609 36 100.0 35 .................................... ATCAGCAAATCTTGAAGATGCAGGCAGACCTCATC 91538 36 100.0 36 .................................... TATCTCAACACTTTTTGCCGATGCTGGCAAAAACTT 91466 36 100.0 34 .................................... AAACCGAACTTGCCACTACCAATCACGCGATCGC 91396 36 100.0 35 .................................... GTGTTGCTTCTCAACTGCCACCATTCAAACTTGTC 91325 36 100.0 34 .................................... TTTACTGAATTCTAAAGTTCGACCGATTAACGAT 91255 36 100.0 36 .................................... TCACAGGCTTGGACAGCAAAGCGCGGTGTTTGCGAC 91183 36 100.0 35 .................................... TTATTCATGTCTGCCCTGTGTTTGAACATTGCCAC 91112 36 100.0 35 .................................... TCATTCAAGCTATTTAAGATATTTGCTTTACTCTT 91041 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 29 36 100.0 35 CTGCCCAAACCTTAGATGCCAGTAGGCGTTGAGCAC # Left flank : TTACTTCAAGGCTATGGTGAAAGAATACAGTATTCAATTTTTCGCTCTTGGCTGAGTATGCGATCGCGGGAGAAGTTGCGTTGGGAACTGGAAAAGATTTTAGCACCAGAAGATAGTCTACTTTTGATTCGTCTGTCTCATCAGTGCGTTGCTGGGATACCAGCCTATAACCGTCCTGGTGTTTGGTCATCTCAAGAGGAGGTATACCGGATTGTCTGATGCAAGGATCTCTAATTGTGAGGTACTAATATAGAAGAACACAAGCATAAAACTCGCATTAGGCTTGCTGTTTAAGATTTTTAGGTGGGCTGGAGGTGCTTGCATTTTCTTCTAACCATTCAAAAGGTAGGCAATCCAAAGGTTTTAAGATTGTCCACTATCTTTAAGGATGATGCCGCAATGCGTGGAGCAGAGAATTGGGCTATTTTGTTGCTTCTTCAAACAAGGTGCTTGTAATATCAGAACTGTGTGGCTCTCTGATATGGGTTTCAGCCATCGCA # Right flank : AAGGGTAGAAAATTGAGCAAATAGCGATCGCTCCCTCATTTTCACGGGAAAAATAGCAATAGAAGTGATCGCCCCAATTCTTAGAGGAAACCCTAAATCACACTTCGTATGGCCACCCTAATTCCCTCATTCAATAGCTGCTCAATGAGAATGACCCCTGGCGAGAGCAGGTTAGCGCAGCGCTTGGAGGAAAAATTAGAAGATGGCTATTTACTTTGGTATGACGTGCCAGTGGGTAGAAAGCAACTGCATCCAGATTTTATCGTGTTGCACCCCAGCCGGGGCTTATTTATTTTGGAGGTAAAAGACTGGAAACTCGACACTATTAAAAGTATCAATCCCTCAACAGTCACACTGCTAACTGAAGATGGAATAAAAGAAGTCAAGCACCCACTACAACAAGCTAGAGATTATGCCCTAGCAGTAAACAAGATGCTAGAAAAAGATTCTCTTTTGGTGCAGCAAGAAGGTAAATATCAAGGTAAACTGGCCATTCCCTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCCCAAACCTTAGATGCCAGTAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 98946-97831 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAX01000117.1 Nostoc sp. RF31YmG NODE_124_length_148783_cov_14.627592, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 98945 37 100.0 36 ..................................... ACAAGCTTCATACTCTCTCCAGTAAATCTTCTACTT 98872 37 100.0 36 ..................................... TTGATGATTTTGAAGCGCAAACCGGAACTAACACAC 98799 37 100.0 39 ..................................... ACGAACGGGGATGGAATTGCTACGGGCGGATGCCACTGA 98723 37 100.0 35 ..................................... GCCTAGCTTTGCAAATTTAATCAAACGCGCCAAAA 98651 37 100.0 33 ..................................... AAGCATTTTGGGACAACTACAATCAAGCACTAC 98581 37 100.0 36 ..................................... TCAAGAAATGGATAGTCAAAAAGCAATATGGCGTTC 98508 37 100.0 37 ..................................... ATGAAACTTTTCTTTGATAGAATTCCTAAGATTTTAG 98434 37 100.0 34 ..................................... AACACTTTAAACACTTCGAGCTTGAGGGGTTATA 98363 37 100.0 31 ..................................... AAGGAATTGCTGAGGATTGGATAGTTTTACA 98295 37 100.0 35 ..................................... GTAATAATATTCCGACAAGCGCAAGGTACAAAATA 98223 37 100.0 35 ..................................... ATTTTCTACTTTAGTGATCGCTCATAATTAGCCAG 98151 37 100.0 34 ..................................... TTGCCTTTGTATTTTGTAGTTGTGGCGCTATCCT 98080 37 100.0 35 ..................................... GAGTCTACAAACAAAGGAGAATCCTTGCCTGTAGT 98008 37 100.0 32 ..................................... AGAGAATTCGTAGCCTTTATTGCATATGGCAG 97939 37 100.0 35 ..................................... AGCGCAACTATGATAAAGGCTCATTAGCATTCCTA 97867 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 16 37 100.0 35 GTTCCAATTAACCAAAATCCCTATCAGGGATTGAAAC # Left flank : TTAACTCATCACGATTGGCAAATTCTCGTAGCATTTTTTTATTCCTATATAATTTTGTGTATAAAACCGATAGCATCTATTGTTATTTCCTCTGTGCTTGCTGTCCAGGTAAAATTGAGTTCATCAGCGGCGAAACGCCAATCGATACCATAGTGTTTTTTGCTTGAGTCTGGCGTCAACCAGTAGATGTTTGAAAACAACAGTCAAATTTTGCGCCCCAAAAGCTTACTCCTAGTGGTTTTGAACCCTTTTTCACAGTATTGGAGGTTGACGCAAACTCTCTAATCCTGACTAGACAAGGTTTTCAGTTTATTTTACTTATGACACCCTTGACAACTCAATGCCACGAAAGCTACTTTGGTTGGAGGTTGACGAAACTGTACCTTGAAAACCAAATATATCAATGCTTCCAACTCCNNNNNNNNNNCGTTCCAATTAACCAAAATTCCTATCAGGGATTGAAACTAATCAGTTTGCTTTTAATGATAATTGCGCATGGC # Right flank : TATTTTTTGAAGTAAATACAAGAGGCGTCCTCTTCTTCAAACATGATAGGGCAAAACTCTTTACAAGAAAATCAAGGCGATAACGGTAAACTAGCAGATAAAACTGTTACCTGCTGACGCGATGAGCTTCTGCATCAATCCTCACTGTCTAAACCCACAAAATAGAGATGATGAACTATTTTGTATTAGTTGCGGCTCAGAACTACTACTACAAGGCCGTTATCGGGTTGTGCGTCAGCTTGGGGGCGGTGGGTTTGCGGTAACTTTTGAGGCTCTAGAAGTCCGAACGAACACATCCAAAGTTCTCAAAGTCTTAACTAACAATCATCAAAAAGCAATCGAACTGTTCCAGCAAGAAGCAGAAGTTTTAAGCAAGCTTAATCATCCAGGTATCCCCAAAGTTGAGCGCGATGCTTACTTTGTTTATTTTCCCAGAAACAGCCAAAACCCAATCCATTGTTTTGTAATGGAAAAAATTGTGGGTATGGATTTGCAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAACCAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //