Array 1 257889-258650 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZK01000002.1 Streptococcus halichoeri strain P1033 NODE_2_length_262054_cov_131.098245, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 257889 36 100.0 30 .................................... CTCTTTATCTTTAGTCAGCTCAAAAGTCTG 257955 36 100.0 30 .................................... ATTAGATATTGCAAAATCAATCAAAAAAGA 258021 36 100.0 30 .................................... TCGTGCCAATATTTTGTATCAGTCCTAGCC 258087 36 100.0 30 .................................... ATTGGTACGAAGAGAATAAAGAAGGCCTTT 258153 36 100.0 30 .................................... TTCAACATAGAGGAATGACAACTCAAGAAT 258219 36 100.0 30 .................................... TCGGCATCTGATAAGGAATACTTACGTATA 258285 36 100.0 30 .................................... TAGCTTATACTATTAACACTTCTTTATACT 258351 36 100.0 30 .................................... TGTTCTTATACATCTTTGTTCCAATAGGGG 258417 36 100.0 30 .................................... AAAAAAGCTAAGATTTTCAGAAGTGAATGG 258483 36 100.0 30 .................................... AAAAAAGCTAAGATTTTCAGAAGTGAATGG 258549 36 100.0 30 .................................... TAACAGCACACAAACTAATGGTGGTACGCT 258615 36 94.4 0 .T.............A.................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.5 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCAACTATAACAGAATTAATCGCCTTTGAATGTCTAGAGAACGAATTGGACTTGGAATATGATGAAATTACTATCTTGGAACTTATAAAGGCTTTAGGGGTTAAGGTGGAAACACAGAGTGATACTATTTTTGACAAGTGTTTGGAGATTTTACAAGTTTTCAAATACCTGTCTAAAAAGAAACTCTTAATTTTTGTGAATTGCGGCTCCTATCTTACCAAAGAAGAACTCTTGAAGCTGAGAGAGTATATTGAATTATCTCAGCAAACGGTCCTCTTATTAGAGCCAAGAAGTTTGTACGATATTCCGCAATATGTTCTAGATGAAGACTATTTTTTGATAGCAGAAAACATGCCATAGTCTAGCTTCTAAAAACCTTGATTTCATAAGGCTTTTGCCGTATAATAATGCTATGAAAGGGCGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : CGAGTGGTAAAAAAATGTCGCATCATGTGAGGGGTAACACGAAAACCAAAAATTTTGTACGACAAATACCTAGCACTTCACAAAAAATAAGACAAAGCTATTTATACAGAATTATGTATGTCTGAGAGTTTTTATTATGATACGCTTGATATTGCACTATTAGCTTTTACAGAGCTTTACAGAGAGGGTTCTTTGATTGTTGAACGAGGAGTTTTTAGCTGGTTTATACAGTAAGTGAGCAGTTTATACGTGAAATTGTATGCTATTATAGTACTATCAAAATAGCAAGAAGAGATAACTGTTTTTTCAATTGATTATATTTAGTCGCCAACTTTAACGACGATCAAACTTGTTATTTTATGGGGACGGTCCCCCGGCGGGGACCATTTATCCGTCATGGCTCAAAACGAGGAATGCTAATGGACGCATCAAGAACCGTCGCATGTGCAGAACAGCAGACTGATAATCTGAGGTGTTAGTTCGAATCCGGTTGACGAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 261380-261811 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZK01000002.1 Streptococcus halichoeri strain P1033 NODE_2_length_262054_cov_131.098245, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 261380 36 100.0 30 .................................... TTAGGCTTCGTAAAGTCGGCAGCGCCCTTT 261446 36 100.0 30 .................................... AAAATCTCTAAAGGTTTTGCTTGATGTCCA 261512 36 100.0 30 .................................... AGTAAATAAAGACAAGTATCGGCTCCCACC 261578 36 100.0 30 .................................... GTATTAAGTAGAGATTTATGCATTTCTTGG 261644 36 100.0 30 .................................... GTTGGATAGAGCAGGAGACTTCTAATCTCA 261710 36 100.0 30 .................................... TAAAATACAAATACACATTCGTTTGTAGGT 261776 36 86.1 0 .............................TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 98.0 30 GCTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Left flank : CAAATGATGATAATATCTAAGTTTAGATTTACAATCCAGTTAATGGCGTAGCATAAAACAGTGACATGTACCCTTTTTACTGGACTAATCCAGTGAAAGGTTTTTTGTATGAAATATAATTATAAGTTTAAGTTAAATGCAGTAGAAATGTATCAATTAGGACAGTGGATTGATACTCCAGATCGTACTGGGGTCTTTTCTATGGTTACTACAGCCAAAATCGCTGCCGCAGAGAGAATAAAACAAAGGTGGATTCTCAAAATCAGTTCGCCTAGAAATTAATCTGAGAAAGCTGAAAAGCAGCGCAGAATTTTTGCTTACTACAGCAACTAACCCCAATATTGTTTGAGACTTAATCGGCCGCCAAAAACTTCTTAAGCCAATTGATTTCATAAGGTTTTTGCCGTATAATAGTGCTATGAAAGGGCGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAAAACCTCTTGACAAAGTGCCAGAAAGTGAGTATACTAAGAAAGTTGTCAGCTGATTAGCGCAAGTGTCAATAAAAAGTAAAAAAAGTTATTGACAAAGCCTTAAGAAGCTGATAGAATAAAGAAGTTGCCTCGCAAGAGGGGAAAGACCTTTGAGAACTGAATAAGACGAACCAAAAAGTGAAGAGGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], // Array 1 57303-57535 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZK01000012.1 Streptococcus halichoeri strain P1033 NODE_12_length_57688_cov_107.771547, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 57303 36 100.0 30 .................................... GATAATTTTTCACATTCAGGAAATGAAAGC 57369 36 100.0 30 .................................... GTCGTTCATAAGAGTATGTGACTTTGCCGT 57435 36 97.2 30 ...............A.................... CTTTAATAGGCAAGTTAGGAACAGTCTTTG 57501 35 86.1 0 ...............A............-.TTG... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 95.8 30 GTTTTAGAGCTATGTGGTTTTGAATGGTCCCAAAAC # Left flank : GCTATCGTTCGCGGGGAAGGGCTCACGCAGATGAAAGGATGTAAATGTTCCTTTAAAAGCTATGCCGTGCTTAAAACCAGTCAGATAGTTCAAGTTAGCCAAATTTAAAGAATAATGATGTGATAGGTAAAGGGGAAATGAATGAGGCGGACCGTAAATTAGGCGATTTTTACTGTGCTTATCAAGGTAAAAATCGCTCATGCTCCGCCAATTAACCGTAGAGCTGCCGCAGAGAGAATAAAACAAAGGTGGATTCTCAAAATCAGTTCGCCTAGAAATTAATCTGAGAAAGTTGAAAAGCAGCACAGAATTTTTGCTTACTACAGCAACTAACCCCAATATTGTTTGAGACTTAATCGGCCGCCAAAAACTTCTTAAGCCAATTGATTTCATAAGGTTTTTGCCGTATAATAGTGCTATGAAAGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : GAAGTGTTAGCTCCGCCTTTCCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAAAACCTCTTGACAAAGTGCCAGAAAGTGAGTATACTAATAAAGTTGTCAGCTGATTAGCGTAAGTGTCAATAAAAAGTAAAAAAAGTTATTGACAAA # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTGGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 142745-143242 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZK01000003.1 Streptococcus halichoeri strain P1033 NODE_3_length_143557_cov_148.269658, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 142745 36 100.0 30 .................................... TCTATGTAAACACAACCATACTGACCACCA 142811 36 100.0 30 .................................... TTTTATCCAATTCCCCACCTGCTTGGTCGA 142877 36 100.0 30 .................................... CAAAATTGTTCAAGAGATACGTAATCGCAC 142943 36 100.0 30 .................................... ATTGATGATTTTGAAACTGTTATTGGTCAT 143009 36 100.0 30 .................................... TGCTTCATTTGGCACTTTAGAAGAGTGGAA 143075 36 100.0 30 .................................... GCATTTAGTAGACAGCTGGACAGTTGATTA 143141 36 100.0 30 .................................... GCATTTAGTAGACAGCTGGACAGTTGATTA 143207 36 86.1 0 .............................TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.3 30 GCTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Left flank : AACTAGCAACAGACCAAACGTTAATCTCCCGAAAAGTCCGTTGAAGCATCCCAGTAAGCAGTAAAAACTGAGAATATAAGAGCATATAAATTGCTTTGGGGATCGATACAGTGTCTTAGACCATAGTCCAAAGCGAGTATTTGTCATCCCCCGAATAGACAGAAAAAAAAGAGTCACGCTATCCAATTGTTCATAACTCTCCTGATAAATCGATTGCTGTCATCAATCAAGCCAAGCATTTGGAATACAAAACATCAGCCAAATGCTAGCATAGCAGCTGAGGAATCAGAGATTAGAGGCTTAATAAAAATTTTTGAACCTAAACTGAAAAGGTACTGACGATTAATCAGCCGACAACCATGATAGTTAGCCTTCTTAACGCATTGATTTCGCAAGAATTTTGCCGTATAATAGTGCTATGAAAGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCGTTTGATTGCTAAAACTAAAAATAAATTTGAAAACCTCTTGACAAAGTGCCAGAAAGTGAGTATACTAATAAAGTTGTCAGCTGATTAGCGTAAGTGTCAATAAAAAGTAAAAAAAGTTATTGACAAAGCCTTAAGAAGCTGATAGAATAAAGAAGTTGCCTCGTAAGAGGGGAAAGACCTTTGAGAACTGAATAAGACGAACCAAAAAGTGAAGAGGGGTTTATAAGCAGTATAGACTCCGTCAAAGCAAGAATAAATCTGTCAGCGGACAGCAAAGAACGAGTAAGTTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], //