Array 1 252057-246538 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG753640.1 Schaalia odontolytica F0309 Scfld1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 252056 29 100.0 32 ............................. TGACCGAGATGCTCATCCCCGCCAAGTACAAG 251995 29 96.6 32 ............................C GGAAGTGTGGAAGGAAGGAAGTGTGCGGGGAT 251934 29 96.6 32 ............................T TCGATCGCGCAGCCGTCGTCGAGGCGAACCGT 251873 29 100.0 32 ............................. CCGATCGACCTAGCCGCGTCCCGCCGCTCGCC 251812 29 96.6 32 ............................T CGGGACAACACAAGTATGTCCCGAAACCGGGA 251751 29 96.6 32 ............................C CCCGATCCCAGCGGGCATCACGCCGCCCACAC 251690 29 96.6 32 ............................A TGGGAACACATCGGCGCACTACGTGGCCAGCG 251629 29 100.0 32 ............................. GTTTTCCTCTTCTCTCAGGGCTTCTCGGCTCC 251568 29 100.0 32 ............................. GACCGCGCAACCAAGGCAAAGCTCATTCATTG 251507 29 96.6 32 ............................T CGCGCGGCGACCTCGATGCCTGCCTCGGTTTC 251446 29 100.0 32 ............................. CTAACGGATTCGCTGGGCGAAATCATCGACCA 251385 29 96.6 32 ............................T CGTCTCCTTCGACCCCGGCTCGTTCTGGGACA 251324 29 96.6 32 ............................C CCGCCAATGGCGTGCGCCGCATGAGCTCCCTC 251263 29 96.6 32 ............................C TGGGATGACGTCGAACCCGTCGACATCATATG 251202 29 100.0 32 ............................. TGGGTCGCAGAAATGCGCCGCACGCCCGTCGC 251141 29 100.0 32 ............................. CCAGCACGCAGCGAGGCATCAAGACCCCGCTG 251080 29 100.0 32 ............................. GTTTTCCTCTTCTCTCAGGGCTTCTCGGCTCC 251019 29 100.0 32 ............................. GACCGCGCAACCAAGGCAAAGCTCATTCATTG 250958 29 96.6 32 ............................T CGCGCGGCGACCTCGATGCCTGCCTCGGTTTC 250897 29 100.0 32 ............................. CTAACGGATTCGCTGGGCGAAATCATCGACCA 250836 29 96.6 32 ............................T CGTCTCCTTCGACCCCGGCTCGTTCTGGGACA 250775 29 96.6 32 ............................C CCGCCAATGGCGTGCGCCGCATGAGCTCCCTC 250714 29 96.6 32 ............................C TGGGATGACGTCGAACCCGTCGACATCATATG 250653 29 100.0 32 ............................. TGGGTCGCAGAAATGCGCCGCACGCCCGTCGC 250592 29 100.0 32 ............................. CCAGCACGCAGCGAGGCATCAAGACCCCGCTG 250531 29 96.6 32 ............................C CCAGCTGACCTGCAGGCTGAGGAGATGCTCTT 250470 29 96.6 32 ............................C CCGCCTGGGAGCCGATCGTCGTCGCGCGCCGC 250409 29 96.6 32 ............................T CGCCGCCGCATGGCTCGACGACGAGGGCGACC 250348 29 96.6 32 ............................C CCAGCTGACCTGCAGGCTGAGGAGATGCTCTT 250287 29 96.6 32 ............................C CCGCCTGGGAGCCGATCGTCGTCGCGCGCCGC 250226 29 96.6 32 ............................T CGCCGCCGCATGGCTCGACGACGAGGGCGACC 250165 29 96.6 32 ............................C CCAGCTGACCTGCAGGCTGAGGAGATGCTCTT 250104 29 96.6 32 ............................C CCGCCTGGGAGCCGATCGTCGTCGCGCGCCGC 250043 29 96.6 32 ............................T CGCCGCCGCATGGCTCGACGACGAGGGCGACC 249982 29 100.0 32 ............................. AAGCCGAAGCCTTCCAGAAAGCGATCACCGAC 249921 29 100.0 32 ............................. TACACCGTCGATGGTGACGGACGCCTCGGTGG 249860 29 96.6 32 ............................C CGCGTTGAATTGGCGCTCGCCGCGTACAACGC 249799 29 100.0 32 ............................. GAAGCCCTCAACCGTGAGCTCGCGCAGATGAC 249738 29 100.0 32 ............................. CTCAACGGGCACGTCGATTTCTCACTCTCTGA 249677 29 96.6 32 ............................C GTTTCCAGGTGGTCAGGGTTATAACCGTCGAT 249616 29 100.0 32 ............................. AACGGCGGCACGAGCATCGATCAGCTCGCAGG 249555 29 96.6 32 ............................C GAGAAAGGCCGCGCCGGCTGGCGCATCCCCGC 249494 29 96.6 32 ............................T AGATTCGGGGGTTATTTACGTGGGGTGAGTGC 249433 29 96.6 32 ............................C CGACGATCGCGCACATCATCACGTCGCCGTCT 249372 29 100.0 32 ............................. GCGACATCGGCGAAGCAGGACGCCAACTCATC 249311 29 100.0 32 ............................. TCAATAACTTGGTTGTGTGTTGTTGGTTACTT 249250 29 100.0 32 ............................. CGCGTCTACGCGCGCCTGGACGAACGCCTGTC 249189 29 96.6 32 ............................C ACGTCGATGGGCGGCTCGCAGGACAACGGCAA 249128 29 100.0 32 ............................. GGCTGGTAATCGGCGGGGATCTGCGCGTGGAG 249067 29 96.6 32 ............................C CCGCATTTACCTACCAACAGGGCCGGGTTGTC 249006 29 96.6 32 ............................T CGATCGCGCGGGCGCTCGTGATGGTGTTGACG 248945 29 100.0 32 ............................. CTCTCGGCGCTCATCGACGGATCGGGACAAAA 248884 29 100.0 32 ............................. CCGCTGCCGCCTGGTTCGAGGCCAACCTCCCC 248823 29 93.1 32 ..........................T.C CGCAGCTATCCGCGCGATTCGTCGAATGGATG 248762 29 96.6 32 ..........................T.. GCGCGGCCCACGCACGCCTGGTACGTGGACAG 248701 29 100.0 32 ............................. CCGACGATCTCGGTCCCTTCGTGACGGAGTGC 248640 29 100.0 32 ............................. CCGACGATCTCGGTCCCTTCGTGACGGAGTGC 248579 29 100.0 32 ............................. CCAGATCGTGGTGCCCTTCTTCTTAATCAGAT 248518 29 100.0 33 ............................. GGCGGCTGGGACTGGCTCAAAGACGCCGCCGAC 248456 29 100.0 32 ............................. CCGCTCCACGTCAGCCGTCGCTTATCGAAGTC 248395 29 100.0 32 ............................. CGTGCCCGCAGCTGCGTCACGTTCGCGATACC 248334 29 96.6 32 ............................C CTCCACGAAGTAGCAACCGCTCTCCTGCCCAC 248273 29 100.0 32 ............................. ACACCCCGACGAGCGCCCTCGAGGCCGTGGAT 248212 29 96.6 32 ............................T GCCCCCGGCCCCACGTCTTACGCCGGCAACAT 248151 29 96.6 32 ............................C TTGTCGGTCGCATCTGACGCGGCCAAGGCCTC 248090 29 96.6 32 ..........T.................. TCCTGCCCGTCATCGGGAACCTCCTCAACCAG 248029 29 93.1 32 ...C........................C CTCCACGAAGTAGCAACCGCTCTCCTGCCCAC 247968 29 100.0 32 ............................. ACACCCCGACGAGCGCCCTCGAGGCCGTGGAT 247907 29 96.6 32 ............................T GCCCCCGGCCCCACGTCTTACGCCGGCAACAT 247846 29 93.1 32 ........T...............G.... TACTGGCCGATCGGTGGGCAGGATTATGCGAT 247785 29 96.6 32 .......T..................... GCCACAAGGCAGTTCAGGACCAGGATCATGAC 247724 29 96.6 32 .......T..................... TGCACGATTCCGGTGGTTGTCCCTGTCGTGTA 247663 29 89.7 32 ..........T.......A.........C GGCCGTTCAAGGAGTGCCAGCCCGACGAGCGG 247602 29 96.6 32 ............................C TCGCCTTGACGCCAGGGGGTGACGATGAAGGT 247541 29 89.7 32 ....................A....T..C GAGCCGCCTACCTTGGTAAAGCCCAGCTCAGC 247480 29 93.1 32 ..C.................C........ TATGGTCCGATCACCATCGACGGGGTTAAGCA 247419 29 89.7 32 ..............T......G.....T. GACGACTGGCGTGAGCTCGCGGTCGAAACACC 247358 28 86.2 32 ........AC.-................C GGCACCAAGCGTATGAGTGGGCTGGTAGCCTA 247298 29 89.7 32 ..........T.....T...........C ATGGCCGGGCCCACGCCCTCCGTGAGTGCAAC 247237 29 96.6 32 ............................C CGGGTGCTGTCAGCCAGGAGCGTGAGCTCCTC 247176 29 96.6 32 ............................C GCCGCCCGCAAGGCCATTGGCGTGCCCTACGT 247115 29 89.7 32 ...C...................T....C GCACATGCCGACCCTGTTCGCACGGGCACAAG 247054 29 89.7 32 ..........T............T....C CCGACACGCCAGCCCCGAGCCGATCGCACAGG 246993 29 89.7 32 ................T........A..C ACCATGGGCGGCTTCTTAAACGGCTTAGGGAA 246932 29 93.1 32 .................A..........T GTGTCAGGCTGGGGGATACCCCGGTTATGGGC 246871 29 100.0 32 ............................. GACTTGGCGCGGCGCTCAACGGCGACCCGCAG 246810 29 96.6 32 ..........A.................. TACGAACCGGGAATGATGGCGAAGCTGCTCCC 246749 29 96.6 32 ................T............ TACTGGCCGACTGGTGGTCAGGATCATGTAAC 246688 29 93.1 32 .......T....................C GACAACGGCGGTGGTCGATGGGTTGTGCCGGC 246627 29 89.7 32 ...........CC.C.............. AAGAAGAGCGGCGGGGATAAGTGGCTCCTCAT 246566 29 82.8 0 ...........CC.C..........A..A | ========== ====== ====== ====== ============================= ================================= ================== 91 29 96.7 32 GTTTTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : GTCGCTGATCTGCGGTTGTGGGATGACCGCGAGGGCGCGGTCGCTGCTGGGGTGTTGTATGAGGAGAGTGGATCCTGGTGATCGTCCTCGTGCTGTCCGCAGTGCCTGAAGGTTTGCGAGGGCACGTGACTCGGTGGTTGATGGAAATCTCCCCGGGGGTATTCGTGGGGACGCTGTCCGCACGGGTTCGTGAACGCTTGTGGGATATTGTCACCGAGAACATGAAGACTGGGCGTGCCGTCATGGTCTATCGGGCGCGCAACGAACAGGGCCTGGAGTTCTTGACGTGGGGAGACCCCTGGAAGCCCGTCGACTTCGATGGGCTGACGCTCATGATGCGTCCCTACTACTCCGAGGGACGAGGCCAATACTCCGAACCTGATCCTGCGGCGCGTCAGTTGCGTAAGCGTCCTGCGATGAGTAACTTTCAGAAGAGGCGCAAAGCTCAAGGCTTTCCAAGATCTGACCGATCTGCGCGATAAAAACGCAGGTCAGAAAGT # Right flank : CTGGGTATCAAACACCAGTCCCTGTGGTACACGTATTCCCCGCTACCGCGGGGTTCTCCAGTGCGCCGTTGGTGTGCATACCCACCGGAATAAACGACAACGAGCCTTGCGCTTCCTAGTATCTCTGCCGTATCCTGCTCGGCTACCTAACACACGGATGAAGGAGAAATAAGGATATGAACGAGGCACAGGTGACGGACTTGGGTGCTGGTGAGGCGACGGAGATGCAGCAGGACGCAAGCGAGGCAACGGCGACGTAGCAGGGCGCGCGCGGGGCGGCTCAGACGCGGATTCGCGCGTACATCACGCACGTGGGCAGCGAGTATCGCAAGGACGTCACCTCGGGCACCTGCGAGCTCTGCATCGTCGACTGGAGCGCCCGCATCCGCGACATCTCCTTCGAACTCACGGACGTCGACACCGGCGCCACGTGGCAGGCAACCACCCCACCCTTCACGTCTGCCGGTGGAACGACATCTGGGAGATACGCGTGAACCCCT # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [35-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //