Array 1 418445-419602 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UHEU01000002.1 Streptococcus agalactiae strain NCTC11079, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    418445	    36	 100.0	    30	....................................	TACCCTTTTTATTTGCCAAAAATGGGTTTT 	
    418511	    36	 100.0	    30	....................................	TATTTCTACTGCTACAAATTTTGCAAGAAG 	
    418577	    36	 100.0	    30	....................................	ATTCCTCAAAACAAAACCAACAAAAGTTAA 	
    418643	    36	 100.0	    30	....................................	TCGTCAATGGATAATTTACAGCTGACACAT 	
    418709	    36	 100.0	    30	....................................	TCGCACATGGTTCTCACCTCCAATCTAAGG 	
    418775	    36	 100.0	    30	....................................	ATTGATTTTTTTGAACGAGTGGTTCCTGGC 	
    418841	    36	 100.0	    30	....................................	CGTACCATCTATCAATTTACCGCAAGCTGT 	
    418907	    36	 100.0	    30	....................................	CCGATTATTTCCTACATAATACGCACGTTT 	
    418973	    36	 100.0	    30	....................................	AACTGTGTGATACTTTTCGTTTTTTTCTTT 	
    419039	    36	 100.0	    30	....................................	TTTTATAAGTGATAGAGTGTGCAACACCGT 	
    419105	    36	 100.0	    30	....................................	TTAAAAGATTTAAACTATCAAGCGTCAATT 	
    419171	    36	 100.0	    30	....................................	TTCTAAATGCTGGTGACTGCTTTGCATAAA 	
    419237	    36	 100.0	    31	....................................	TTGCTGCTAGACCCAAACAGTTTATTTTTAG	
    419304	    36	 100.0	    30	....................................	TCCTTTTTTAGATAATGTGCGATCACGGAC 	
    419370	    36	 100.0	    29	....................................	TTTTACCAATGCTTCCATATCGCTTATAT  	
    419435	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA 	
    419501	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT 	
    419567	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        18	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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