Array 1 6558-7253 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJBQN010000041.1 Veillonella ratti strain MSK.5.8 IHPKBKHJ_41, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      6558	    36	 100.0	    30	....................................	GATATGAGCGAACGAGGTAAATATTTAGTA	
      6624	    36	 100.0	    30	....................................	AAATATGCCCTGATCTGTATCTGCCTCTAT	
      6690	    36	 100.0	    30	....................................	GCAAGTCATTACACGATATACGCCCGCTTT	
      6756	    36	 100.0	    30	....................................	TATCCGTATAAGTCTGTTTGTTTTCGCTAT	
      6822	    36	 100.0	    30	....................................	TATACTCATAAGACTCCCAACAAGTGAAAG	
      6888	    36	 100.0	    30	....................................	AGGTCGGCAGGATTCGGCGCGAAATACTAC	
      6954	    36	 100.0	    30	....................................	GCCAATTTTTGGCGGCAAGGATATAATATA	
      7020	    36	 100.0	    30	....................................	TTTCTTTAACGATGATGAACTAAAGATGAT	
      7086	    36	 100.0	    30	....................................	CCGGCATATGCTGTAATGTATAACAATGAC	
      7152	    36	 100.0	    30	....................................	CGTACGCGCTAACGGAACGTTATGACAAAT	
      7218	    36	  91.7	     0	.............................T.A.T..	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  99.2	    30	GTTTGAGAGTAGTGTAAAACTAGTTTGGTCTCCAAT	                              	       

# Left flank :   TTCTATTGCGACGGAAGATGTAGGACTTTTATTTGAAATCAATCAAAAGATTCAAGAACTGTTTATGGCTTTAGAGGGGAGTTTAAGCCTTGATGTAACCTATAATAATCTCATAACTGCACAGGATATTGTAAAGTTGGGGAATTTTATGATTTGCGATGATGAATTTGACGATATTGGTAAAGTTATTAGTTTTATTGAAGTAGTCGTGGATTTGATCCGGCCAAAGTTATTAGTTATGCTCAATCTGCGTAAATTTATGACAAATAGTGAATTGGAATTATTTTTTGAGACAATTTTGTGTAAAAAAATACCTGTTTTTTGTATAGAAGGTAGTGATGCGGAAGAGATTTCAGTTGTTCAAGAATTAGAAGTATTATATACTTTAGATAAGGATTTATGCGTGTTTTAACTGACTGACTAGAATTACACCTGCCTCGTAAGCTGAAAAATCTCTCAAATCTTTAAATTCAGCATTTTGGGTAAAAATGCAATTTGGG
# Right flank :  TTCATTTGTCAATAAATAGTATGAAATATCCTCTCTTTTTATACTGATTTAATCAAAATTGTACATTCATATATCATCAGTTTTGTGCGTATGAGAGTATCATTTATAAGCTTTATTTCGGCTTTTCTGTAAAAGAGCCAATTTTAATAGTTGTATATACTATCGTGTTATTTGATGCTGTAAAGTATGTAAGTCTAGTAGTGGCGTTTGAGAGTAGTGTAGAGCTAGAGTGGTCTAATTAGTGTATAGGGATAAGTGTGCTTTATTCGTACTTATCTCTATACAATATCTCGTTTTCTAATATTCCTCACAAAAAAATGTAAAAAAATTCATTTTGCCTCTTGCACACAAATTAAAATCGTGCTATTATATTTAAGTACCTGAAACAACGGTATTGCGGCCCCGTGGTGTAGCGGTTAACATGTCGCCCTGTCACGGCGAAGATCGTCAGTTCAAATCTGATCGGGGTCGCCATTTTTTTTGCCTCAAAAAAATATTTG

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTGAGAGTAGTGTAAAACTAGTTTGGTCTCCAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-4.30,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//