Array 1 176595-176823 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTQF01000002.1 Streptococcus mitis strain DE0498 NODE_2_length_427263_cov_107.311213, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =============================== ================== 176595 34 100.0 31 .................................. TTGAGGTGGTAATATGAAACGACCAAACAGG 176660 34 100.0 31 .................................. GTGCAGAAGGTACAGGAACTGTGAAGAAGTG 176725 34 100.0 31 .................................. TAACCGTAAAGAATACGAAACAGTGCCACAG 176790 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== =============================== ================== 4 34 100.0 31 TTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Left flank : GATTGTCGTAAAGACAAATAACTTCTTCTTGGTTACAGGCATGCCAACCTGTCACTCGGATGAAGCCAAATAAAAAGGAGAAACATCATGGCAATCTCAAAAGAGAAAAAAAATGAAATCATCGCACAATATGCACGTCACGAAGGTGATACAGGTTCAGTAGAGGTTCAAGTTGCTGTCCTTACTTGGGAAATCAACCACCTTAACGAACACATCAAACAACACAAAAAAGACCACGCTACTTACCGTGGATTGATGAAAAAAATCGGTCGCCGTCGTAACTTGCTTGCATACTTGCGTAAAAACGACGTTAACCGTTACCGTGAGTTGATCAACTCTCTAGGACTTCGTCGCTAATCTTGCGTCTAAACCGTTTCTATACTTCGTTGGCTTCGGCTCGATGTACCATTAGTACAATCTTCGCCTCGTCGCCTAGTCTATAAACGGTTTATCCAGCAAGACTGGAGCTCTCTGATTTTCAGAGGGCTTTTTTATTGAGA # Right flank : CCTCAAATGGTATCATCTAATTACACCATAAAGGTGCGTAGCTACTCGGCTTGAAAAGCCTAGTAGCTGTCTGCAAGCCCCTTCGGAGAGCCCACACTTTACGAAGTAAAGTATAGTATGTTATACTTTACATGGAAGTAGTCACCGAATTCCAGTTAGAAATTACTTTGTAACTACGTTTTGAGGAGGAGTAAAATGCTTTCCTATGTTCGACATTACCCACTAGCGATAGCTAAATTAATGTGTCTGTGCTCTCCTAAAATCTGCTGATTTATTACTGACTAATACAGGAGGTTTTTATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCCACCAGTATCGATTATTTAATTATTTTATTTATTTTATTTGCACAGCTATCACAGAATAAACAAAAATGGCATATTTATGCGGGGCAATATCTAGGCACAGGCTTACTTGTAGGGGCGAGTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //